BGIOSGA027515

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Revision as of 07:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027515| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027515, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA027515

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027515, complete gene.

LocusTag

OSJNBA0056O06.24

Ensembl Transcript ID

BGIOSGA027515-TA

Ensembl Protein ID

BGIOSGA027515-PA

Length

4054

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5682985..5687038

Sequence Coding Region

5686763..5687038,5686337..5686423),complement(5686156..5686260,5685856..5685957),complement(5685617..5685709
,5685318..5685425),complement(5685128..5685208,5684985..5685020),complement(5684812..5684903
,5684617..5684734),complement(5684294..5684382,5684109..5684199),complement(5683949..5684040
,5683121..5683440),complement(5682985..5683013

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5682985..5687038 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5682985..5687038 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGGCGAGCAAGAAGTCCGTGGCCGTGGCCGTCGCGCCCGCTGCTGTGCCGGCCAAGGGGAAGGGCGGCAAGAAGCGGGAGGCGGAGGACGAGATCGAGAAGGCGGTGAGCGCCAAGAAGCAGAAGGCCGCGGCGGCGCCGCCGGCCAAGGCCGTCCCCGCGCCCAAGGCGGACGCCAAGAAGGCCAAGAAGCAGCCGCCGCCCAAGAAGGCCGCGAGCAGCAGCAGCGGCAGCAGCTCTGAGGAGGACTCGTCGGAGTCCGAGGAGGAGGTCAAGGTCCAGGTGAAGAAGACTACTAAGCCTGTCAAGCAGGAGTCTTCTTCTGATGAGAGCAGCGATGAGAGCTCTGATGATGAGGATGCTAAGCCTGCGGCTCCGGTTGCTAATAATGGTCTTAAGAAAGGCAAGCCAGCGAGCAGCGATTCTGAGAGTGATTCAGACGATGAAATGGATGAGGACGAGAAACCTGCTGCTCCAGTGAAAAAAACTTCTGTGACTGCACAAAAGAAAAAAGATGATTCTGACAGCTCTGAGAGTGAGTCAGATGAGAGTGATTCGGACGAGGATGTGCCTACAAAGTCTAAAGCCCCTGTTGTAGCTGCCAAGAATGATGATTCTACTGATGGTTCCGAGTCCGAAAGTGACTCTGAGGATGAGGATGCTGCACCCAAGGGTGCTGCCAAGAAGGAAAGCAGCAGTGATGAAGAGGATGACAGTTCTGAGGAAAGCTCTGATGATGAACCTAAACAACCTCAACAAAAAAAGGCCCAAGAGGAATCCTCTGAAGAGTCTTCTGAAGAAGATAGTGATGAAGAGGATGAAAAATTGGCCAAAACTCCTAAGAAGAAAACGCCTGCTGCCACCAAATCACAAAATGATGAACCTAAAACTCCTGCGAGTAACCAAAGTCAGGGAACTGAGTCAGCAACCCTTTTTATGGGCAACCTTTCTTTCAATTTAAATCAGGACCAAGTGAAGGAATTTTTCCAGGAAGTTGGTGAGGTTATCAGTGTTCGTTTGGCTACACATGAAGATGGCTCCTCCAGGGGCTTTGGCCATGTTCAATTTGCTTCATCTGAAGAAGCTAAGAAGGCGCTTGAATTGCATGGCTGTGATCTGGATGGTCGTCCAGTGAGACTTGACTTGGCTCATGAAAGAGGTGCATACACCCCTCACAGCAGGAATGATACTGGATCATTCCAGAAACAAAACAGAGGTTCCAGCCAGTCTATATTTGTCAAGGGTTTTGATTCATCTCTTGAGGAGAGCAAGATCCGAGAATCTCTTGAAGGACATTTTGCTGATTGCGGAGAGATCACACGAGTCTCAGTTCCCATGGATCGTGAAACTGGTGCAAGCAAAGGGATAGCATACATAGATTTTAAGGATCAGGCTTCCTTCTCGAAGGCACTTGAACTAAGTGGGTCTGACCTTGGTGGCTACAACCTGTATGTTGATGAAGCCAAGCCTAAAGGAGATAGCCGAGATGGTGGTGGGAGAAGAGGTGGCAGATCTGGTGACAGATTTGGCGGCCGATCTGGTGACAGGTTTGGCGGCCGATCTGGTGGTAGGTTTGGAGGTAGAGATGGTGGCAGAAGAGGTGGACGAGGTGGCAGAGATGGTGGCAGAAGAGGCGGACGTGGCGGTTTTCAGAGCAGGCAGAGTGCTGGTACAGCTAGTACAGGAAAGAAGACAACTTTTGGAGATGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGKASKKSVAVAVAPAAVPAKGKGGKKREAEDEIEKAVSAKKQKAAAAPPAKAVPAPKADAKKAKKQPPPKKAASSSSGSSSEEDSSESEEEVKVQVKKTTKPVKQESSSDESSDESSDDEDAKPAAPVANNGLKKGKPASSDSESDSDDEMDEDEKPAAPVKKTSVTAQKKKDDSDSSESESDESDSDEDVPTKSKAPVVAAKNDDSTDGSESESDSEDEDAAPKGAAKKESSSDEEDDSSEESSDDEPKQPQQKKAQEESSEESSEEDSDEEDEKLAKTPKKKTPAATKSQNDEPKTPASNQSQGTESATLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELHGCDLDGRPVRLDLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESKIRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLYVDEAKPKGDSRDGGGRRGGRSGDRFGGRSGDRFGGRSGGRFGGRDGGRRGGRGGRDGGRRGGRGGFQSRQSAGTASTGKKTTFGDE</aaseq>

Gene Sequence

<dnaseqindica>1..276#616..702#779..883#1082..1183#1330..1422#1614..1721#1831..1911#2019..2054#2136..2227#2305..2422#2657..2745#2840..2930#2999..3090#3599..3918#4026..4054#ATGGGGAAGGCGAGCAAGAAGTCCGTGGCCGTGGCCGTCGCGCCCGCTGCTGTGCCGGCCAAGGGGAAGGGCGGCAAGAAGCGGGAGGCGGAGGACGAGATCGAGAAGGCGGTGAGCGCCAAGAAGCAGAAGGCCGCGGCGGCGCCGCCGGCCAAGGCCGTCCCCGCGCCCAAGGCGGACGCCAAGAAGGCCAAGAAGCAGCCGCCGCCCAAGAAGGCCGCGAGCAGCAGCAGCGGCAGCAGCTCTGAGGAGGACTCGTCGGAGTCCGAGGAGGAGGTAGTTTCGCTTGGCCGTTCCATGTTTTGCTAGTATTCGCGTAGTTGCGTTTAGAGTTTGATGTTTACTATGCTTTAGCGTTTAGTATGTAGAGCTCGGAGTTTGTAAATGAGAGTAACTTCATTTGAAATGATTCGAGTAGTTTCATTGAAGGGACATGTGTTAGGTTATGGGTGGTATAATCTATTGCTTTTGTTTGTAGTTTAATGTACTCATACAATGGATACAACTTTAGTCCTTAATTCCGCTTTCGTTAATGTGTTTTAGGTGAGGCTTTTGTTTTGTGTGAAAAACGTCTGTTGAGCTTTATAGATTAAATATCTTCTCTTTGTTATATAGGTCAAGGTCCAGGTGAAGAAGACTACTAAGCCTGTCAAGCAGGAGTCTTCTTCTGATGAGAGCAGCGATGAGAGCTCTGATGATGAGGTATGGAGCCACTATTGCGATTCAATCTTAAGTTTTTACTGGATGAGATGCTGATTTCTCGTATATTTCAATCAAGGATGCTAAGCCTGCGGCTCCGGTTGCTAATAATGGTCTTAAGAAAGGCAAGCCAGCGAGCAGCGATTCTGAGAGTGATTCAGACGATGAAATGGATGAGGACGAGGTTCGCATTTCATTTCTGTTTGGATATGTTTCACTTATGTAGTTTTATATTAATGATTGTGATGCTCATGCTAGGTAGTTAGATTACAGTGGTTCTTTTTAACAGTATATTAAACATGCGACATTTCAAAGGGAACTGATCAACCTTTTGTTTTAGCTTGTTTGACATTGTTTCTATGTTCTTTTGTTCATCCTTCAGAAACCTGCTGCTCCAGTGAAAAAAACTTCTGTGACTGCACAAAAGAAAAAAGATGATTCTGACAGCTCTGAGAGTGAGTCAGATGAGAGTGATTCGGACGAGGTGAGTGCTTAGAGATGACTGGATGAATTCCTTTGCTGTTTTTATAGTTGTACTTACACTTGTATCTTTGTTGGTTATATTCCTTGTAAATGTTAATGGACATATTTTTCATGGCATAGCTGACAGTATTTGATTATATTTTTCAGGATGTGCCTACAAAGTCTAAAGCCCCTGTTGTAGCTGCCAAGAATGATGATTCTACTGATGGTTCCGAGTCCGAAAGTGACTCTGAGGATGAGGTATTCCTTGGACTAGTATGTCTAATATGGTTCCATTGTTAAGTGTAACAACTAATGTCTAATATGGTTCCATTGTTAAGTGGTAACTCCATTTATATTTGTCAACTATTTAGGAGAAAGCTAAGAAACCTACCCTACCTGCCAATAGTTCTTTGTTTACATGCCTATCTGACACTCCTTTTGCCTCACAGGATGCTGCACCCAAGGGTGCTGCCAAGAAGGAAAGCAGCAGTGATGAAGAGGATGACAGTTCTGAGGAAAGCTCTGATGATGAACCTAAACAACCTCAACAAAAAAAGGTAATGTCGAAGTTTTGAATCTGCTGGATGACTGTACACCTCTGAACAGTCTGAACAATGAAATACTTGTTTTTAACAATTTTTTTTTATATAAATGTTATTATAGCAGGCCCAAGAGGAATCCTCTGAAGAGTCTTCTGAAGAAGATAGTGATGAAGAGGATGAAAAATTGGCCAAAACTCCTAAGAAGGTTCGTTTTCATGCTAGTATTTTAAATTTGATTCTATAGTACATAGATTGTTCTTTTCATTTACATTACAAGTTGTATGAATTAATTACTCTCTGTAAATTCTTCAGAAAACGCCTGCTGCCACCAAATCACAAAATGATGAAGTATGCCCCGCACCTTGAAGTTTTGTTTATTTAGCATTTTCTAAACATAGGATATGTATTTGATATGATGCTTTTGTGCAGCCTAAAACTCCTGCGAGTAACCAAAGTCAGGGAACTGAGTCAGCAACCCTTTTTATGGGCAACCTTTCTTTCAATTTAAATCAGGACCAAGTGTAAGCCTTTCTGCAGAAGATTTGTCGACATTTTTCAGAAGGTGTGAATCTTGATCCTTTCTTGCTTGTGTTTACAGGAAGGAATTTTTCCAGGAAGTTGGTGAGGTTATCAGTGTTCGTTTGGCTACACATGAAGATGGCTCCTCCAGGGGCTTTGGCCATGTTCAATTTGCTTCATCTGAAGAAGCTAAGAAGGTAAGTTTTTATTTGACTTGTCATGTTTTCTGTCCATGTCATTTTTATTTCCTTGAGCTAAGGATGTGATGAGACTTCATTTTGTACCGATCCAGTTAGATGATTGTGATTATTTCATCCAAAAGTATAATGACACAGTATCAGAAAAAAAACCAAAAACTGCTGCTTAAACTACAGCAAGCAGTGACATGTTTGCAATAGTACTAGGTATGATGATTTGTTATTTTGTTTCAGGCGCTTGAATTGCATGGCTGTGATCTGGATGGTCGTCCAGTGAGACTTGACTTGGCTCATGAAAGAGGTGCATACACCCCTCACAGCAGGTAACCTTTTTTCTTCTTTATTTGTGAACGGGTTTAGCTATACTGACTGAATTTATGTGTTGACAGTGTGCGAACTAATTTTCTAATTTGATAGGAATGATACTGGATCATTCCAGAAACAAAACAGAGGTTCCAGCCAGTCTATATTTGTCAAGGGTTTTGATTCATCTCTTGAGGAGAGCAAGGTAATTTCTTTGGTTAGCCTATTATGCATCACCTTTTTTTTTCTGATTGTTGTCTTTGCCAAATCCAGATCCGAGAATCTCTTGAAGGACATTTTGCTGATTGCGGAGAGATCACACGAGTCTCAGTTCCCATGGATCGTGAAACTGGTGCAAGCAAAGGGTCAGTTGCAGAATAAAACCATTAACAATTGTCACATTCTGATTAAACTTGCTAGCGATGAAACTTAATTTGCATGTGCCACTTTGCATGTATTTTTTTGGAAGAAGGTTCATCTAGTAAAGAAGATATTAGCGAGTGTGGATAATTGAACATATATGTTATTAACCAGCTATTGTTTGCATTTTGTGAATTCAATTAAAAGAGATGAAACCCATGGAGCTATCATTACCTGCTATATGAACATGTTGACTTAAATTTGTTATGTCAAATTATTGGTTGCCATGTTCCATGTATAACTTTGAAATGGACCTTGAAAATGACCATGAACCGTTATATGCTATTCAGCTTGTGAATTGATAAGTGAACTTGATTCTATCATGTGAAATACCTTTAATTTAAGTTGATGCCCTTCTGATTTACATTTATTGTTGTTTATTTGCTGTTTTGGTTACATTTTCTGAAGCATCTACTGATAGTGGTACTGTACAAATGTTGCCGAGTAATGCAGGATAGCATACATAGATTTTAAGGATCAGGCTTCCTTCTCGAAGGCACTTGAACTAAGTGGGTCTGACCTTGGTGGCTACAACCTGTATGTTGATGAAGCCAAGCCTAAAGGAGATAGCCGAGATGGTGGTGGGAGAAGAGGTGGCAGATCTGGTGACAGATTTGGCGGCCGATCTGGTGACAGGTTTGGCGGCCGATCTGGTGGTAGGTTTGGAGGTAGAGATGGTGGCAGAAGAGGTGGACGAGGTGGCAGAGATGGTGGCAGAAGAGGCGGACGTGGCGGTTTTCAGAGCAGGCAGAGTGCTGGTACAGCTAGTACAGGTAAATGTGTAAATCAAGTTTTGTTGCATGTTTTGAAAATTACATGTTATCAGTATCCTAGTTAGATACTCAGGTTTCTAAGACTTGCATTTTGGTTTGTCTTGCAGGAAAGAAGACAACTTTTGGAGATGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027515

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