BGIOSGA027522

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Revision as of 07:44, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027522| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027522, complete gene.| tag = OsI_280...")
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Gene Name

BGIOSGA027522

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027522, complete gene.

LocusTag

OsI_28098

Ensembl Transcript ID

BGIOSGA027522-TA

Ensembl Protein ID

BGIOSGA027522-PA

Length

5482

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5585584..5591065

Sequence Coding Region

5591050..5591065,5590755..5590872),complement(5589788..5589833,5588338..5588394),complement(5588172..5588251
,5588014..5588077),complement(5587722..5587907,5587567..5587634),complement(5587350..5587468
,5587139..5587260),complement(5586902..5587000,5586296..5586775),complement(5586112..5586210
,5585783..5586025),complement(5585584..5585652

Genome Context

<gbrowseImage1> name=IndicaChromosome08:5585584..5591065 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:5585584..5591065 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTGCGCCAAGTGCGAGAAGAAGCTGGGGAAGGTGATCGTGCCGGACAAGTGGAAGGAGGGGGCCAGCAACACCAACGAGAGCGGCGGCCGCAAGATCAACGAGAACAAGCTCCTCTCCAAGAAGAACAGGTGGACTCCATATGGAAACACTAAATGTGTAATCTGCAAGCAGCAGGTGGCAATGATTGAAGCATATCTGCGAGCTAACAAGATGTTTGTAGACTACAATGAGCCTCAAACAGAAAGGGTTTACTCTTCGTATCTTGAGTTGGATCTTAATGAGGTGGAACCTTGCATTTCAGGCCCAAAGAGGCCTCATGACCGTGTCCCTTTGAAGGAAATGAAATCTGACTGGCATTCTTGCCTGGATAACAGAGGTTTTGCTGTACCAAAGGAACAACAAGATAAAGTTGTGAAATTTGACTTCCATGGACAACCTGCTGAACTCAAACATGGCAGTGTTGTCATAGCAGCAATTACTAGCTGCACAAACACATCAAATCCTAGTGTTATGCTTGGTGCTGCCCTTGTGGCAAAGAAAGCCTGTGAACTGGGTCTTGAGGTGAAACCATGGGTAAAGACAAGCCTTGCCCCTGGATCTGGGGTTGTCACTAAATACTTGTTACAGAGTGGCCTTCAAGAATACTTGAACAAGCAAGGTTTCCATGTTGTTGGATATGGTTGTACCACTTGCATTGGCAACTCTGGTGATCTAGATGAATCTGTATCAGCTGCCATTTCAGAAAATGATGTTGTTGCTGCTGCTGTTCTGTCGGGCAACCGTAACTTCGAGGGTCGTGTGCACCCATTGACCCGGGCTAATTACCTTGCTTCACCGCCTCTTGTGGTTGCATATGCACTTGCTGGCACTGTTGACATTGATTTTGAGAAAGAGCCGATTGGAGTTGGAAAGGATGGTAAAGAAGTCTTCTTCAGGGACATATGGCCCTCAACTGAAGAAATTGCAGAAGTGGTCCAATCTAGCGTACTGCCTGATATGTTCAAAAGTACATACGAGGCTATTACAAAAGGCAACCCGATGTGGAATCAGCTGACCGTGCCCGAAGCATCGCTCTATTCGTGGGATCCAAACTCCACCTACATCCATGAGCCTCCATACTTTAAGGACATGACCATGTCCCCACCTGGCCCCCATGGGGTGAAGAATGCCTACTGCTTACTGAACTTTGGGGACAGCATTACGACAGACCATATTTCACCAGCAGGTAGCATTCACAAAGACAGCCCTGCTGCCAAGTACTTGCTTGAGCGTGGTGTGGACCGTAAGGACTTCAATTCATATGGTAGCCGTCGTGGTAATGATGAAGTAATGGCAAGAGGAACATTTGCGAACATCAGGATTGTGAACAAGTTTTTGAATGGAGAAGTTGGACCCAAGACCGTTCATGTCCCTACAGGGGAGAAGCTCTATGTATTTGATGCTGCCTTGAAATACAAGTCTGAGGGTCATGACACTATTGTTCTTGCTGGTGCTGAGTATGGAAGTGGCAGTTCTCGTGACTGGGCTGCCAAGGGACCGATGCTCCTGGGTGTTAAAGCTGTGATCGCTAAGAGCTTTGAGCGTATCCACCGAAGCAACCTGGTGGGTATGGGAATCATTCCTCTCTGCTTCAAGGCTGGTGAGGATGCCGACTCACTTGGCCTTACTGGACATGAGCGGTATACCATCGACCTCCCGACCAACGTCAGCGAGATCCGTCCCGGGCAGGACATTACCGTCACAACCGACAACGGGAAATCCTTCACTTGTACTCTTCGCTTTGACACAGAGGTGGAACTGGCATACTTCAACCATGGAGGCATCCTCCCATACGTCATCCGCAACCTGGCGCAGAACTAG</cdnaseq>

Protein Sequence

<aaseq>MVCAKCEKKLGKVIVPDKWKEGASNTNESGGRKINENKLLSKKNRWTPYGNTKCVICKQQVAMIEAYLRANKMFVDYNEPQTERVYSSYLELDLNEVEPCISGPKRPHDRVPLKEMKSDWHSCLDNRGFAVPKEQQDKVVKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAALVAKKACELGLEVKPWVKTSLAPGSGVVTKYLLQSGLQEYLNKQGFHVVGYGCTTCIGNSGDLDESVSAAISENDVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGVGKDGKEVFFRDIWPSTEEIAEVVQSSVLPDMFKSTYEAITKGNPMWNQLTVPEASLYSWDPNSTYIHEPPYFKDMTMSPPGPHGVKNAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKFLNGEVGPKTVHVPTGEKLYVFDAALKYKSEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERYTIDLPTNVSEIRPGQDITVTTDNGKSFTCTLRFDTEVELAYFNHGGILPYVIRNLAQN</aaseq>

Gene Sequence

<dnaseqindica>1..16#194..311#1233..1278#2672..2728#2815..2894#2989..3052#3159..3344#3432..3499#3598..3716#3806..3927#4066..4164#4291..4770#4856..4954#5041..5283#5414..5482#ATGGTGTGCGCCAAGTGTAAGGATCTCTACCCCCGCCTCGATCCGCCGCCGGATCAGCTGTCCGCGCGCTCAATTTCTTCTGTTTCGCCCTAGATTTTTTTCTCCTCTTTTTTTTTGGGTTGGAAAGATCATGCCCTAGGTTTTTTCTCTTGCGTGCGCGGCTGAACCGGGTTGTGGTTTTGGGCTTGTGCAGGCGAGAAGAAGCTGGGGAAGGTGATCGTGCCGGACAAGTGGAAGGAGGGGGCCAGCAACACCAACGAGAGCGGCGGCCGCAAGATCAACGAGAACAAGCTCCTCTCCAAGAAGAACAGGTCGATCCCTTTACTCCCCGATCTTTCTTTTGATTCCGTGTCCCCATCCGTAGCAGCCGCGATCGGGGATTCAGATAGCGTAGGTTTGATTTCGATGGTGCGAATCCCCAGAGATTGATTGGTTGATTAGGTTAGAAATCGTTGACGGTTGACATTTTGTGCCCAATCTTGTGTGTCTTATGTTTTTGGATTATATTGCTTTTGGGGGAAATTTCAAGTGTGTTAACTAAGGAATGGGTAGATCATGTGTGTGATTCAAACAATAGCTATAGAAGTCACTGATGGGGATCATAATTCTTCCAAGAAAATGAATATCACCCTTTAAGATCCATAATAGTTATAACTGTTATTTTGATTGAATGATGTTGGTGAACTTGAAGTTCAACAATGCACCCAAGTGATATTTTTAGAAAATCATGCCGCGGTCATTTTTTGCCATCATCCTGTAACTACAGACTCATTTCTCCGTCAACTCGATAGCCAATACTTAGATGGGGCAAGGCTGCAAGGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATATATTATGCTGGTAGCTTTGTTCAAAATCAGGTTGGACAAATCATTTGAAATCATATTTCACACTTGTACTGGCTAGAAGGAGGTGTACCAGCAAGGAATAAAAAGTACTTCGTACGTAGCGCACATGTTGCCCAACCCCTTCTAAAACCGGATTGAACATAGCCAACTGTTTAGCCGATCCTGAACAATTATTGCATGTTTCCCTGAAAAAGCCATCTTGTTTACTTTCAGTAAAGTATTTTGTGCTTTTTCTACTACCTGTAAATCTTAAGTTTTTAAATTACATTCAAAAGATAGTTTGTTGTGACTTGTGAATGTAAGCTAATCTATGTATGGCATTTTAATATCAGGTGGACTCCATATGGAAACACTAAATGTGTAATCTGCAAGCAGCAGGTCCACCAGGACGCCAAGTACTGCCACACCTGTGCATATTCAAAAGGCAAGGAACTCGCTCTGTCAGGAACACCCTGTGCCTAATTGGCATCATTGACTTACAAGAACAATGTTGTTTCTTTTTCAACCTGATACATGTGCATTCTTGCAGTCCAAGTGAATATTATCTGAGACATGCTCAGTATTATGAGAACTATCCATTATTTACTAATTCTGATTTCTGACCATAATATTGACTTGTTTCAGGTGTATGTGCAATGTGCGGGAAGCAAGTGCTGGACACGAAGCTGTATAAGCAAAGCAATGTGTAATGTCAACTCCTGTGCCATCCATGATAATCTTGTAATGCCCTGTCAATGAGATATTGTACTTGGAATCTAGCTGTTGAAAAATAGTTACATGTGTTCAAGAACTATGTACCTGGCTAACCATTCTAGAAAACTCCAAACTGTCTACTTACCGCAAATCTATGCTACTCCAGTGTGGCTTGGTTGTGCTTTCTGCAAATGTTTGGTGCACAAGGCTGCTGCTGAACGAGTTACTGGAATTGCTTGCACTGATTTCTCCAAGTCTTTGTTGCTGCATCTGGCTATAATTTGTGTGTTTTTAGAGAGATTTTATACATGCTTCGAGGCATGACCGCATGAGCAAATGGAAAATTTTCCATTTGTCGATGTTACACACAGGATTTACGATTTCAATAGGCCCTTCCGTTTCGGGTACTGGTGGAATTTGGAATTTCGCGAAATTCGGTGGAAAACCGGTAAATTCCGAACAAATTTCATAAACCAAAATTTGAATACAAATTCCCTGAGTTTGCTGACAAGTTCTCGAAAACCGGTCGGTTTTAGTGAAATTCAGATCGAAATCATCGAAATTTCGATCAATAATCTGTAATTTGGACCAACTACTAATAATTGGGCCTAGTACATGTAATCCGGCCGATGCAAGTGTTTTCCTTTTTTTTAATTCTTTATTTATTCTTTCCTGATGTAAGTTTCAGTAAATACGCACAATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCTGTGACATGCACTTGTTTGCGATGGTAGAAATATCCATGGGATTTCATTTCCCTAAGGCCTAGTTCGGTTAATCCCCATGGGGAGGGATTGGAGGGGGATTAATTCCACACCTCAATAGGTGTGGAATTCCAAATCCCTCCAATCCCCTTATGATCGGGATTAACTGAACAAGTAATGTGGCCTTGCAGTTTTTTTTAGCACCCGTTGGTATTGTATTGATTACACATATAATGGCTTATTCACTTGTAAAATATTGTATGCTGATGGGTTTCACCTTCTCAGCGTCCTGTAAACTAAATATTGCGTTTTGATTTAGGTGGCAATGATTGAAGCATATCTGCGAGCTAACAAGATGTTTGTAGACTACAATGAGGTATGCCTTTTTTGTTTGTTGTTATAGCACTTGATTTTAATTATTTGTTAAACGTAATACAAAAATATTTGAATTCATGATGGCAGCCTCAAACAGAAAGGGTTTACTCTTCGTATCTTGAGTTGGATCTTAATGAGGTGGAACCTTGCATTTCAGGCCCAAAGAGGTACAATTATATGATCTTGATTATGTGCTTGTTGGATTGTTCAGCTAATGGAGAGGTGCATAATATTTACCTGTTTGATTTTTTTAACTTGTAGGCCTCATGACCGTGTCCCTTTGAAGGAAATGAAATCTGACTGGCATTCTTGCCTGGATAACAGAGTTGGTTTCAAGGCAAGCGCAAAGATTTGTAGGATACATCTTTTTGCACTACTGTTCTGTATCTGACATTCTAACTTACTAATACAATGCACGTGGAATATTACAGGGTTTTGCTGTACCAAAGGAACAACAAGATAAAGTTGTGAAATTTGACTTCCATGGACAACCTGCTGAACTCAAACATGGCAGTGTTGTCATAGCAGCAATTACTAGCTGCACAAACACATCAAATCCTAGTGTTATGCTTGGTGCTGCCCTTGTGGCAAAGAAAGCCTGTGAACTGGGTCTTGAGGTTTGATCTTCGTCATGTTTTCACAGATTGTTGCATTGCCTTCTTTTATCTGCTCTCTGTTGACTGTGCAATGCCATTTCTCTTCAGGTGAAACCATGGGTAAAGACAAGCCTTGCCCCTGGATCTGGGGTTGTCACTAAATACTTGTTACAGAGGTACCTTCGTGTCATTGAATAACTAATTTTAGTAAAGATGAAATTCCAGTGTCATATCTGGACCAATCTCAACCAAACATGGTAATTTCTCTGTGCAGTGGCCTTCAAGAATACTTGAACAAGCAAGGTTTCCATGTTGTTGGATATGGTTGTACCACTTGCATTGGCAACTCTGGTGATCTAGATGAATCTGTATCAGCTGCCATTTCAGAAAATGGTACATCTAGATTCTATGAATGTTGAATATTTAGCTGCAACGAGCCAATGAGTTTCTCTATTGGCAACTTATGGTTTTCTTTTTTATAGATGTTGTTGCTGCTGCTGTTCTGTCGGGCAACCGTAACTTCGAGGGTCGTGTGCACCCATTGACCCGGGCTAATTACCTTGCTTCACCGCCTCTTGTGGTTGCATATGCACTTGCTGGCACTGTAAGTTTGTGTTGTTTTCTCCTCCTTGATACTCATATTAACTTGATTCTGTTGGAAGGGTTGGCATGGTATTAAAATTTTGCCTATCTTTGCTTTTGTCTCAGGGAGCCTGCTAACATTAGAACTTGTACTTTTCAGGTTGACATTGATTTTGAGAAAGAGCCGATTGGAGTTGGAAAGGATGGTAAAGAAGTCTTCTTCAGGGACATATGGCCCTCAACTGAAGAAATTGCAGAAGTACGTGTTCTGTGATGTTATTTTAATATGTTTCAGATTTTCATCTGTAAGTGTGAGTTTCATTTATTGGAGATATTTATCTCTCGAGTCTCGCTTAATTATTGGCAATAAAATGCTACTTGACAGGTGGTCCAATCTAGCGTACTGCCTGATATGTTCAAAAGTACATACGAGGCTATTACAAAAGGCAACCCGATGTGGAATCAGCTGACCGTGCCCGAAGCATCGCTCTATTCGTGGGATCCAAACTCCACCTACATCCATGAGCCTCCATACTTTAAGGACATGACCATGTCCCCACCTGGCCCCCATGGGGTGAAGAATGCCTACTGCTTACTGAACTTTGGGGACAGCATTACGACAGACCATATTTCACCAGCAGGTAGCATTCACAAAGACAGCCCTGCTGCCAAGTACTTGCTTGAGCGTGGTGTGGACCGTAAGGACTTCAATTCATATGGTAGCCGTCGTGGTAATGATGAAGTAATGGCAAGAGGAACATTTGCGAACATCAGGATTGTGAACAAGTTTTTGAATGGAGAAGTTGGACCCAAGACCGTTCATGTCCCTACAGGGGAGAAGCTCTATGTATTTGATGCTGCCTTGGTATGTTGCTAGTATGTAGACAGACGATGTGATACTGTTGTTGTATCGACTAACATCCTTGGTTTTGTCTGGTACATTAATGCAGAAATACAAGTCTGAGGGTCATGACACTATTGTTCTTGCTGGTGCTGAGTATGGAAGTGGCAGTTCTCGTGACTGGGCTGCCAAGGGACCGATGCTCCTGGTAACTCCCCATATCTAGATTCGTCATCTTGTTTTGATACTCATGTTTGGGGAAGTATAGCATTATTAAGTACATGCTGTTTTCAGGGTGTTAAAGCTGTGATCGCTAAGAGCTTTGAGCGTATCCACCGAAGCAACCTGGTGGGTATGGGAATCATTCCTCTCTGCTTCAAGGCTGGTGAGGATGCCGACTCACTTGGCCTTACTGGACATGAGCGGTATACCATCGACCTCCCGACCAACGTCAGCGAGATCCGTCCCGGGCAGGACATTACCGTCACAACCGACAACGGGAAATCCTTCACTTGTACTCTTCGCTTTGACACAGAGGTACATACTTTCCAAATACTCGTTGGATAAACTTACCAGGCCAGTTCCGTATGGAGAATTCATTACAGCTGCTTAGGTCCTCTCAACCGGTTTGCTTACATATTACGTCGTTCTTTGTTGTGCTATATAGGTGGAACTGGCATACTTCAACCATGGAGGCATCCTCCCATACGTCATCCGCAACCTGGCGCAGAACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027522

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027522&oldid=33779"