BGIOSGA027586

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Revision as of 07:45, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027586| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027586, complete gene.| tag = OsI_279...")
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Gene Name

BGIOSGA027586

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027586, complete gene.

LocusTag

OsI_27974

Ensembl Transcript ID

BGIOSGA027586-TA

Ensembl Protein ID

BGIOSGA027586-PA

Length

6526

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4338366..4344891

Sequence Coding Region

4344077..4344891,4340147..4342190),complement(4338366..4338611

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4338366..4344891 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4338366..4344891 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTAGTGACAGGGGCAATGGGGAGCCTTCTCCCCAAGCTGGGTCAGCTCCTCAATGAGTATGGCCTGCAAGCAGGCTTGCAGAAGAAGATCGAGTCTCTCTCGTGGGAGCTTGAGAGCGTCCATGCCGTCCTCCGCATGGTTGGCCAGGTGCCACCAGAGCAGCTTGACCAGCTGGTCAAGCTCTGGGCGCGGGATCTCAGGGAGGCGATCATCGACGCTTTCATGGTGCATATTGATGGCCGCGAGGAGCCTGCCGACCCCCACATCCTCCGCCGCCTCAGGAAGAAGATCAGCATACTGTTCAAGAAGACCAAGGCTCGCCGAGAGATCGCTGGAGCCATCCAAGACATCAACGAGAAACTTGAGGAGGTGGCTGCAAGGCATGGGAGGTACACGGTCAATAATATCGTCACCAAGCCTGTAGTCCCAGAAGACATTGATCCTCGGCTCCTGAATCTGTACAAAAGGGCAACTGAGCTTGTCGGCATCGAAGGGCAAATGGACAATCTCATAAAGATGCTGTCTCTTGGGAATGATATAGATTTGTTCAACAAGACGGTGAGGGTGGTCTCTGTTGTCGGGATTGGAGGGCTGGGCAAGACAACTCTTGTCAAAGCAGTCTATGAAAAGCTTAAACCAGGTTTTGATTGTGGGGCTTTTGTTCCAGTCGGTCAGAACCCTGACATGAAGAAAGTCCTTAGGGATATTATCATTGATCTTGACAAGAAGACCTATACAGATTTTAATATCACCTTGTTCGATGAAAGGCAGCTAATCAATAAACTCCAGGAAATCCTCCAGGAAAAGAGTTTAGTTTCTAGCTCATGGGGCTCTTTCACTGTCATGCGGATCTATAGGTGTTTCATTGTCATTGATGACATGTGGGATAAGAAATCATGGGGGTTAATCAGATGTGCTCTACAAGACAGTAATCACAGAAGTAGAGTAGTTGTAACTACTCGTGTTTTTGAAGTTGCCACATATGTGGGTGATGTTTACAAAACGCAGCCACTTTCCCGTAATGACTCTGAAAAGTTATTGTATACAAGAATAGTTCAGGGTGAAGGGAAATGTCTTGATAGTTCGTTGGTTGAAGTATGTGACAAATTTTTGAAGAAATGTGGTGGTGTGCCATTGGCTATCATTACAATAGCTAGTCTATTGGCCAATAAACCTCAGGAGGATTGGTCTGAAGTGTACAGCACTATTGTCTTGGGGCATGGAGGCAATGATGATGTGGAAAACACTAGAAGGATATTATCTTTGAGTTACTATGATCTGCCTTTGCATCTGAAGCCTTGCTTACTGTATCTAAGCATATTTCCAGAAGATTATTATATTGAGAAAAATTTGTTGATATGGAAGTGGATAGCTGAGGGTTTCGTACATGAGAAACAAGCCCCTGGTGTAGGGTTATTTGAACTCGGGGAGGGATACTTCAATGAGCTCATAAACAGAAGCATGATCCAGCCAGTGGAGGCTGAAGACAAAGGGTATGTAGATGGTTGCCGTGTTCATGATATGGTGCTTGATATGATCCGTTTATTGTCATTTGAAGAAAACTTTGTCACTGTGTTGGACAGCAGTGAGAAACAGGAATCTCCAAGGATCAAGACTCGCAGGTTAGCCCTGCAGCATAGGAATTTTGAAGAGAACAGACATCAGTTGGGTAATGTGGGGGTGGACCAACTGAGGTCCTTTGTTGTGAGTGAATGCGATGGTATTACTGTGGAATCTCCAAGCTTTCATGTCTTACGTGTATTAGCTCTAGAAAATCATTTTTCTCGGAACTATTACTGTAAACATATTTTGCAGCACCTTGGAAATTTACATCACCTTAGGTACCTTGGGCTACAAAATGTTCGAACCAGCGAACTCCTGGATGAAGTAGGAGATTTAAAATTTTTACAGGTACTGGATCTATCGGGGACTGGAATTCAAGAGTTGCCAGAGTCAGTGGGCTTGCTGACAAAACTGTTGTGCCTACGAGCTAACGAGGGTACAAGGGTGTCGGCTGGTTTGATCGTGAAGTTGACATCCCTGCAGGAAATGTGGATATGTCCCGCTGATATAAGTCAGTTTGTGAAGGTGCTAGGCAAGCTGAGAGAACTAAGGGTGCTTCGTACTAGCCTTTTTACTCATGGACAGGATGAGAGAACAGATAGAGATTTGCTGGAGTCCCTACAAAATCTACACAAGATCCATACTATTGACATTGGGGGCTCATCAAGAATGAAGAGTGTCATGTGGGAAGCAGGATTCACTTCCCCTCGACGCCTCCGACACCTGCGATTGCGATCCTTGGTGTTCTATAGAATGCCTGTGGGGATTAACCCGTTACTTCTTCCAAACCTCTGCTATCTAGATTTGCAAGTGCAGATCGTGAAGGAACAGGACATGGAAACTCTTGGGAGGTTGCCAGAGCTCCGCCACCTAAAACTGTGTTCGTGTAAAACCCATGTGGTCAGCGTTGAGAAGGCTGCTGGTGACAGCTACTTTCGGAAGTTGAGATATTTCAGCACACCCTGTTCATTTCTCCGGTTTGATCTACATGGTGTCATTTGCAGCACAAAGACTATCATGCCAAGGCTTGAATCCCTCGAGTTTTTTGTCCGTGTGCTGTTCCTAAGAGATGCCAACCTACTTGGTTTTGACAAGCTGCTTGGCTTTGGGAACCATGGAAGAACTTCACTAAGAAGAGTTGAAGCTACCATGGCATGTTTGGGTGCCCGTGTCACGGAGGTGGAGGAAGCGGAGGCAGCGCTGGCACAAGTGGCTGCTGTCCATCCCAACCGCCCTACCCTTAAAACCACAAGACTGGGTGACAGTAAGATACATTCACCTTACAAAGAGCCTGAAGTTGTTCACCGTGATGTCAATGTACGGAAGATCAAGGATAAAGGTCGTAACATTAAATTCTCTTGGCTGTTGAGGAACCAATATGTCGAGAAATTGAGGATCTCCATAAACTGTGAGAATGCTAGTCTCAGGGAGGTCAAGGAAGCAGAGGAGACTGCAAGGGAGGTGACATGGATCCATCCAAACAGTCCCAGAGTTGAAATTGTGAGATATGGTGAAGATAAGATGGTGTCGGACTAA</cdnaseq>

Protein Sequence

<aaseq>MELVTGAMGSLLPKLGQLLNEYGLQAGLQKKIESLSWELESVHAVLRMVGQVPPEQLDQLVKLWARDLREAIIDAFMVHIDGREEPADPHILRRLRKKISILFKKTKARREIAGAIQDINEKLEEVAARHGRYTVNNIVTKPVVPEDIDPRLLNLYKRATELVGIEGQMDNLIKMLSLGNDIDLFNKTVRVVSVVGIGGLGKTTLVKAVYEKLKPGFDCGAFVPVGQNPDMKKVLRDIIIDLDKKTYTDFNITLFDERQLINKLQEILQEKSLVSSSWGSFTVMRIYRCFIVIDDMWDKKSWGLIRCALQDSNHRSRVVVTTRVFEVATYVGDVYKTQPLSRNDSEKLLYTRIVQGEGKCLDSSLVEVCDKFLKKCGGVPLAIITIASLLANKPQEDWSEVYSTIVLGHGGNDDVENTRRILSLSYYDLPLHLKPCLLYLSIFPEDYYIEKNLLIWKWIAEGFVHEKQAPGVGLFELGEGYFNELINRSMIQPVEAEDKGYVDGCRVHDMVLDMIRLLSFEENFVTVLDSSEKQESPRIKTRRLALQHRNFEENRHQLGNVGVDQLRSFVVSECDGITVESPSFHVLRVLALENHFSRNYYCKHILQHLGNLHHLRYLGLQNVRTSELLDEVGDLKFLQVLDLSGTGIQELPESVGLLTKLLCLRANEGTRVSAGLIVKLTSLQEMWICPADISQFVKVLGKLRELRVLRTSLFTHGQDERTDRDLLESLQNLHKIHTIDIGGSSRMKSVMWEAGFTSPRRLRHLRLRSLVFYRMPVGINPLLLPNLCYLDLQVQIVKEQDMETLGRLPELRHLKLCSCKTHVVSVEKAAGDSYFRKLRYFSTPCSFLRFDLHGVICSTKTIMPRLESLEFFVRVLFLRDANLLGFDKLLGFGNHGRTSLRRVEATMACLGARVTEVEEAEAALAQVAAVHPNRPTLKTTRLGDSKIHSPYKEPEVVHRDVNVRKIKDKGRNIKFSWLLRNQYVEKLRISINCENASLREVKEAEETAREVTWIHPNSPRVEIVRYGEDKMVSD</aaseq>

Gene Sequence

<dnaseqindica>1..815#2702..4745#6281..6526#ATGGAGCTAGTGACAGGGGCAATGGGGAGCCTTCTCCCCAAGCTGGGTCAGCTCCTCAATGAGTATGGCCTGCAAGCAGGCTTGCAGAAGAAGATCGAGTCTCTCTCGTGGGAGCTTGAGAGCGTCCATGCCGTCCTCCGCATGGTTGGCCAGGTGCCACCAGAGCAGCTTGACCAGCTGGTCAAGCTCTGGGCGCGGGATCTCAGGGAGGCGATCATCGACGCTTTCATGGTGCATATTGATGGCCGCGAGGAGCCTGCCGACCCCCACATCCTCCGCCGCCTCAGGAAGAAGATCAGCATACTGTTCAAGAAGACCAAGGCTCGCCGAGAGATCGCTGGAGCCATCCAAGACATCAACGAGAAACTTGAGGAGGTGGCTGCAAGGCATGGGAGGTACACGGTCAATAATATCGTCACCAAGCCTGTAGTCCCAGAAGACATTGATCCTCGGCTCCTGAATCTGTACAAAAGGGCAACTGAGCTTGTCGGCATCGAAGGGCAAATGGACAATCTCATAAAGATGCTGTCTCTTGGGAATGATATAGATTTGTTCAACAAGACGGTGAGGGTGGTCTCTGTTGTCGGGATTGGAGGGCTGGGCAAGACAACTCTTGTCAAAGCAGTCTATGAAAAGCTTAAACCAGGTTTTGATTGTGGGGCTTTTGTTCCAGTCGGTCAGAACCCTGACATGAAGAAAGTCCTTAGGGATATTATCATTGATCTTGACAAGAAGACCTATACAGATTTTAATATCACCTTGTTCGATGAAAGGCAGCTAATCAATAAACTCCAGGAAATCCTCCAGGAAAAGAGGTAAGAATATAATCATCTGACCACGGCTTGCAACAATTATACGATGATAATGATTTTAGTTTCAGTAGCTGTACAATATTTTATTTATGTCACCTATATATGCAGCTACGCCCAACTTTCACCCATGTATCTCCACTGTACATCAGCTATATTACTCTAAGTCTCAACTTTTAAATGGTCATATCACTTCCAAAACTCCAGCAGCAACCATTTGTAAAAATATCTTAAAAACTTTTCAAGACTTTTCTAGATCCATCAAATATCAAGGAAATTATTGAAATAAATTTAACAATAGTTAATATTCACTCTGTAAGGTTAGAAATTACAAGATTAATTGGTGGTTATAAGTTACGTGCACCAGCACGTCCTCCAATCCAAACAGACACTAAGCCAATCAAGTAGTTTGCTTATATAGTTATATATATTTTAACAGCAGCCCCACGTCGAGCTCTATCCCTTAATCATATCTAGAATAAAAGTGGGTTTCAATATTCTTATTTAATTGTGCCAACCAAGATTGAAGCTCAATATCTCTTGCTCTGATATATCATATTGAGTTCTATGAAATGACAGTGCATCGACAAAACAACCAGTTGAAATATTAAGTACTTTTTATTTTAGTGGATACATACTACATAGACTAGCTAGCTTATATTTGAGTCAATACAAAAGTATACAACCATGTAACATATACGAATGTATTTTTGGAAATAAGCACAGCCCACATTGTAAACATAGCTTTAAATATGTGGTAGTGTTTGGTCATAAAATTGTGAAAAACTCAGGTAACTAGTTTCCTATAATTATCGTTGATATCATATATATATATAATAGGAGTTGACAGCATGTGATTGGTGCTATGAAAAAAGAAATATTCCGCGAAGCCAAAATAAATATGGTCATTATTTGTGTGTTCTGTGGTTATAAAAGCTTAGTGTATGTCAGTGTGTTAAGAGAGACAGATTGATTTAAATAGATGTCCATTGGTGATCAGTATTAAGATAACACTCCATGTTCATAACCTCTGCCTATAAACTCTTTCGAACCGCCATGCTTAGTCTAAATTATCTCGCACCTTACACAGATGGATCAGTTCATCTTCTCGGCTACACCATATTATTGTGATATCTTGCATATTACGAAATATCACCAAATTCCTATTCATAAAACTTCTGTAATAATGAAACAATGTGTTCTCCAATATTGTTAGATCTTAGTTACTTAATTCTACTACCTGGCTGAAATGTTGGATGCTGAGTCCAATTAAACCTTTCCTATATTCCTTTTACCTGGTGTTGCCACAGGACTTCCAGTCCCTTGACCACAATATCATGTATGAGACAGAAGTTCTAAAAAAATAGAGTATGAGACAGAAAAACAACTATGGAATTATTTCTAAACTGAAGAAGGTTTCTGGGGGAATGTATAATAATCCGTAGACCATGGTGGAACCATTCTTGTCCTTGAAAGCATATAGTGTCCATAATCCGTGGATTGGCTGGTGTTTGAGGGGCGTTCGTAGCCTATGGATAGGTGTAGGTGGAATTCATTCATACACAAAAAGGGTGCAGCATATAGAAAGGGGGAAAACATGAGATAGAGAAAAGTATTGCTCTAATCTTCCAAGGAATTATACAGAAGGCAATTTAATAGCGCGTTGCAGTTCAAGCATAATTCACTTGAGTCAAATATTAAGATTGGCCTAATTGTAGCACATAAGTTTGATTTTAACTGCACTAATCTACATATAATTGTCAGATTGAAAAAATAAAATTGTTACAGTTTGGTTTCTCAGGGTTGGTGTGCTTTCTTGCCTGTGTATGTTCTCTCAGTAGCAGTTGCAATGTTAGCATTCCATTACCTAAACAAACATGTTCTTTCTCTAGTTTAGTTTCTAGCTCATGGGGCTCTTTCACTGTCATGCGGATCTATAGGTGTTTCATTGTCATTGATGACATGTGGGATAAGAAATCATGGGGGTTAATCAGATGTGCTCTACAAGACAGTAATCACAGAAGTAGAGTAGTTGTAACTACTCGTGTTTTTGAAGTTGCCACATATGTGGGTGATGTTTACAAAACGCAGCCACTTTCCCGTAATGACTCTGAAAAGTTATTGTATACAAGAATAGTTCAGGGTGAAGGGAAATGTCTTGATAGTTCGTTGGTTGAAGTATGTGACAAATTTTTGAAGAAATGTGGTGGTGTGCCATTGGCTATCATTACAATAGCTAGTCTATTGGCCAATAAACCTCAGGAGGATTGGTCTGAAGTGTACAGCACTATTGTCTTGGGGCATGGAGGCAATGATGATGTGGAAAACACTAGAAGGATATTATCTTTGAGTTACTATGATCTGCCTTTGCATCTGAAGCCTTGCTTACTGTATCTAAGCATATTTCCAGAAGATTATTATATTGAGAAAAATTTGTTGATATGGAAGTGGATAGCTGAGGGTTTCGTACATGAGAAACAAGCCCCTGGTGTAGGGTTATTTGAACTCGGGGAGGGATACTTCAATGAGCTCATAAACAGAAGCATGATCCAGCCAGTGGAGGCTGAAGACAAAGGGTATGTAGATGGTTGCCGTGTTCATGATATGGTGCTTGATATGATCCGTTTATTGTCATTTGAAGAAAACTTTGTCACTGTGTTGGACAGCAGTGAGAAACAGGAATCTCCAAGGATCAAGACTCGCAGGTTAGCCCTGCAGCATAGGAATTTTGAAGAGAACAGACATCAGTTGGGTAATGTGGGGGTGGACCAACTGAGGTCCTTTGTTGTGAGTGAATGCGATGGTATTACTGTGGAATCTCCAAGCTTTCATGTCTTACGTGTATTAGCTCTAGAAAATCATTTTTCTCGGAACTATTACTGTAAACATATTTTGCAGCACCTTGGAAATTTACATCACCTTAGGTACCTTGGGCTACAAAATGTTCGAACCAGCGAACTCCTGGATGAAGTAGGAGATTTAAAATTTTTACAGGTACTGGATCTATCGGGGACTGGAATTCAAGAGTTGCCAGAGTCAGTGGGCTTGCTGACAAAACTGTTGTGCCTACGAGCTAACGAGGGTACAAGGGTGTCGGCTGGTTTGATCGTGAAGTTGACATCCCTGCAGGAAATGTGGATATGTCCCGCTGATATAAGTCAGTTTGTGAAGGTGCTAGGCAAGCTGAGAGAACTAAGGGTGCTTCGTACTAGCCTTTTTACTCATGGACAGGATGAGAGAACAGATAGAGATTTGCTGGAGTCCCTACAAAATCTACACAAGATCCATACTATTGACATTGGGGGCTCATCAAGAATGAAGAGTGTCATGTGGGAAGCAGGATTCACTTCCCCTCGACGCCTCCGACACCTGCGATTGCGATCCTTGGTGTTCTATAGAATGCCTGTGGGGATTAACCCGTTACTTCTTCCAAACCTCTGCTATCTAGATTTGCAAGTGCAGATCGTGAAGGAACAGGACATGGAAACTCTTGGGAGGTTGCCAGAGCTCCGCCACCTAAAACTGTGTTCGTGTAAAACCCATGTGGTCAGCGTTGAGAAGGCTGCTGGTGACAGCTACTTTCGGAAGTTGAGATATTTCAGCACACCCTGTTCATTTCTCCGGTTTGATCTACATGGTGTCATTTGCAGCACAAAGACTATCATGCCAAGGCTTGAATCCCTCGAGTTTTTTGTCCGTGTGCTGTTCCTAAGAGATGCCAACCTACTTGGTTTTGACAAGCTGCTTGGCTTTGGGAACCATGGAAGAACTTCACTAAGAAGAGTTGAAGCTACCATGGCATGTTTGGGTGCCCGTGTCACGGAGGTGGAGGAAGCGGAGGCAGCGCTGGCACAAGTGGCTGCTGTCCATCCCAACCGCCCTACCCTTAAAACCACAAGACTGGGTGACAGTAAGATACATTCACCTTACAAAGAGGTACGTGCACACACATCTATCGATTGGAATTTGTGATCTCAACAATTTATTTGTTCTCTTAATTCACCTATTCTTTCCTTCTTTTCCATTCCTGCGATTAATTATAAGCCTTGATCAGGGTCTGAGCTGCCAGCTAGCCACACGATGTGGCATTCTTCTCTTGTTTAGTTCCTTTATTCTTAGTATGTGCCATGGTTTAGCTTTTCAATAATGGAATTCAATTCATCCTCTACAGTCTACATTGAAGATGTATCCAGCCGATCGAGAAAATTCCTTACATGCATCTAAAATTTCAGTCAATCCATTTCATACCCGCGAATTCTACTCAATCCCTTCTAAGACCCCAAATTTTGGTTTTGGTCCCATAAATACTCATTCCATTAATTGACAGGCAATTGACCATTTAGTAGTTATGGAAAGGTCCATTTTACCTTAGAGCATTGAATGGATGTTGGGATTTGTGGTGTGTTAGGTTGGCAGTATAAGTTGTCGTGCAAGGTTCACACTAAATTCATAACTTGTTGTATGGGATCATGATATATTTTAATTCCGTCCAACTCTTGTGCTTGGGCATAGAAGGAGTTTTCTCCAATTTATTACGGAATTACACAATTCATAGTTTATCTTACTTACTTGTCCATTCAATTCTTATTTTGCCGTACTCAGCCTACAAGTGTCAATCCTAAAGTTGTTTTCCAAAATGTCAATGTGCGGGAGATGAAGGATGATGACGGTTACTTTGACTTCCATTGGTTGCTGCGTAACCCATGGGTCGAGAAATTCGGTGTCTCCATCTTCTGTGAGGATCTACGCTTCAGGAGGTGGAGAAAGCAGAGGCGGCTGCGAGGTGCGCAGTCGACAATCATCCTAACTCTCCCACACTTGACATGATGAGATATGATGAAGATAAGATGGTGTTGTCTGACCAACATCAAGAGGTAAATCGCCTCTGTGATCTCTACTGGATTAAAAGAGTTAATCCCCCATTGTTGTACTTGTTACAAGTAGTTATGAAGCTAGTTGACTTGGTTACCAAGTTTTTAGTCTCCAATCCTATCCCTTATTACTAGTAGCTAACAATATAAATTCTTCTCCATTTGATTCCTATTTATGGAGGTACTTAGCAAGCATGCATGCTGTGCTGCTATGGTGATTTCAACCTTCCATCTATTGTCCTACTAAAATAGGGTGAGAAAGAGGCAAAAGAGGCACCACATTCGCTAGCTCATAAGGTTTAGAAAGTAAACCCTAATACCCAAAAATAAAATCGTACTTGACTGTGTGTGGATCCACCTTGTAACTGTCCATATTAATCACTATAAGCTAAATAGAAAATAATTTGTATCCTAGAAATGATTGAAAAGTTGTATAGAGAACGCAATTCGTTTTAAAACAATCCTGTTCAATTTGTTCATAAAGAGAACCACACCGTGTAAGCCTAAGGACCTACGCTAGCTGCATGCCTGCACCTGTTCTTAATTTACTTTACACGATAACACAGCTTTGCTTACTTGAAATTGGTGTCCCACTCTCAGCCTGAAGTTGTTCACCGTGATGTCAATGTACGGAAGATCAAGGATAAAGGTCGTAACATTAAATTCTCTTGGCTGTTGAGGAACCAATATGTCGAGAAATTGAGGATCTCCATAAACTGTGAGAATGCTAGTCTCAGGGAGGTCAAGGAAGCAGAGGAGACTGCAAGGGAGGTGACATGGATCCATCCAAACAGTCCCAGAGTTGAAATTGTGAGATATGGTGAAGATAAGATGGTGTCGGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027586