BGIOSGA027687

From RiceWiki
Revision as of 07:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027687| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027687, complete gene.| tag = OJ1119_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027687

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027687, complete gene.

LocusTag

OJ1119_D01.18

Ensembl Transcript ID

BGIOSGA027687-TA

Ensembl Protein ID

BGIOSGA027687-PA

Length

1429

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2288874..2290302

Sequence Coding Region

2289953..2290302,2289301..2289398),complement(2289143..2289208,2288874..2289049

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2288874..2290302 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2288874..2290302 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCCCTCCCGACCACCGCCGCCGCCGCCGCCGCGCAGGCATTCGCCTTCGCCCTCGCGCCGAAGCCATCCTCCTCCGCCGCCGCACCATCCGCGCTCTTCCCCCGCACCGCCGCGGCGGCGGCGTTCCCGACGCTGGCTGTGCGAGGAAGCGGGAAGGCGAGGCAGCCGGTGGTGGCCGCGGCGGCGGGGGCGGGGACGGGGAGCGAGCAGAGGGAGACGATACTGCTCCCCGGGTGCGACTACAACCACTGGCTGATCGTGATGGAGTTCCCCAAGGACCCCGCCCCGACGCGGGAGCAGATGATCGACACCTACCTCAACACCCTCGCCACCGTCCTTGGCAGCATGGAGGAAGCCAAGAAGAACATGTATGCCTTCAGCACAACCACCTACACTGGTTTCCAGTGCACTGTCGACGAGGAAACATCAGAGAAGTTCAAGGGTTTACCCGGCGTTCTGTGGGTGCTTCCTGATTCCTACATCGATGTCAAGAATAAAGACTACGGGGGTGATAAATACATAAACGGAGAGATAATTCCATGCACTTACCCAACCTACCAACCAAAAGAGCGGAGGACATCCAAATATGAAAGCAGACGGTACGAAAGGCGAAGAGATGGACCCCCAGCAAGCAGGAGACCAAGGCCGCAGACTGCTCGGCCTGAGTCAGCCTCTTCTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MASLPTTAAAAAAQAFAFALAPKPSSSAAAPSALFPRTAAAAAFPTLAVRGSGKARQPVVAAAAGAGTGSEQRETILLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVDEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPCTYPTYQPKERRTSKYESRRYERRRDGPPASRRPRPQTARPESASSS</aaseq>

Gene Sequence

<dnaseqindica>1..350#905..1002#1095..1160#1254..1429#ATGGCTTCCCTCCCGACCACCGCCGCCGCCGCCGCCGCGCAGGCATTCGCCTTCGCCCTCGCGCCGAAGCCATCCTCCTCCGCCGCCGCACCATCCGCGCTCTTCCCCCGCACCGCCGCGGCGGCGGCGTTCCCGACGCTGGCTGTGCGAGGAAGCGGGAAGGCGAGGCAGCCGGTGGTGGCCGCGGCGGCGGGGGCGGGGACGGGGAGCGAGCAGAGGGAGACGATACTGCTCCCCGGGTGCGACTACAACCACTGGCTGATCGTGATGGAGTTCCCCAAGGACCCCGCCCCGACGCGGGAGCAGATGATCGACACCTACCTCAACACCCTCGCCACCGTCCTTGGCAGGTATAATTATGTAAAATTTCTCATCCTCATTGTCAAGATCTCCACCTCTCTTTGACTCACCTAGTTTGGTTGCCAATTTGCAAGGACTGACTGACTGACTGACTAAGTCGGTAGAGTAATCTCGAGAGAAATGTTTGTTTCATGCTTCACTCAAACATAATAAATTTTGTTTCGATTGTAAATTATGATAGTCGAAATTTTAATTGGAGCGCACGTTTTTGGTAAAATGTAAAAAAGCTTTACATTCTATAGGTGGTTGCAACTTTTGCATGATAATTTGTTGAAGAAACAAGTGTGTAGTAGATTGGTAGACATGTCTATATGTTGCACAGTTTATGCTTGACGATTCACAAGGATTAAAATTTCTTGCGTAAACACAAGGAATGGTTGATTATTTGTTTAGGTATTCTTTGCTGGTCACTGCACGTTGGTGAAGTTATCATCGGTGCTATGTCTGAAATCAGCATTGCTATACTATAAACCAGGCCTACAGTTTTGTAATTTTCTGCCTTTAGTTCATTTTCTTGATACTGAGCATATGTTTGCAATCACAGCATGGAGGAAGCCAAGAAGAACATGTATGCCTTCAGCACAACCACCTACACTGGTTTCCAGTGCACTGTCGACGAGGAAACATCAGAGAAGTTCAAGGGTATTTGCTAATATACTGGTTGCCTCAGTATTTAACCAAGTCTAAACATTTTTGGATTGCCCTGGTTCAAACTATTGTTCTATTACCTGTAGGTTTACCCGGCGTTCTGTGGGTGCTTCCTGATTCCTACATCGATGTCAAGAATAAAGACTACGGGGGTTAGTTCAACATTATTGTCTGCAGCTGGTTATTTGCATAATCAATTAGTTGTTGCTTCTTAAATAAAAAATCTCAATCCTTTCACAATTCAGGTGATAAATACATAAACGGAGAGATAATTCCATGCACTTACCCAACCTACCAACCAAAAGAGCGGAGGACATCCAAATATGAAAGCAGACGGTACGAAAGGCGAAGAGATGGACCCCCAGCAAGCAGGAGACCAAGGCCGCAGACTGCTCGGCCTGAGTCAGCCTCTTCTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027687