BGIOSGA027690

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Revision as of 07:47, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027690| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027690, complete gene.| tag = OJ1119_...")
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Gene Name

BGIOSGA027690

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027690, complete gene.

LocusTag

OJ1119_D01.12

Ensembl Transcript ID

BGIOSGA027690-TA

Ensembl Protein ID

BGIOSGA027690-PA

Length

2979

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2270294..2273272

Sequence Coding Region

2272950..2273272,2271719..2271872),complement(2271524..2271650,2271333..2271418),complement(2271178..2271249
,2270769..2270972),complement(2270294..2270632

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2270294..2273272 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2270294..2273272 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGATGAAAGGGGTTTCTGAGGGCCTGATCATTGGAATAACAGTTGGAGTGGTGATAGGGGTGCTGCTGGCAGTTGGGATACTTCTGTGCTTGAGGTATCGGCGATCTCAGGCACAGATAAGGAGTAGTAGCTCAAGGAGGGCATCGACGATTCCCATCCGTGCCAATGGTGTTAATGCTTGCACGATACTCTCGAACTCCACTACGGGGCAGGAATCGCCAAGGGAGGTTGAAGATCGCGGAGCATCTATGTGGCTGGAAGGGCCTGGTAGGAAGAGTGTGATATCAGCTTCTGGGATACCCAAATATGCATACAAAGAGCTGCAGAAGGCCACCAGCAATTTCACAACACTATTGGGTCAAGGAGCCTTTGGTCCTGTTTATAAAGCTGATTTGTCATCTGGTGAAACTCTTGCTGTTAAAGTGCTTGCTAACAATTCAAAGCAAGGTGAAAAGGAGTTTCAAACTGAGGTTTTACTTCTTGGACGATTGCACCACAGGAACCTGGTGAATTTGGTTGGCTATTGCGCTGAAAAAGGGCAGCATATGCTATTATATGCATTCATGCCTAATGGAAGCCTTGCATCGCACTTATATGGTGAAAACATTGCACCGCTCCGGTGGGATTTGAGGGTAAACATAGCTCTGGATGTTGCTCGGGGCTTGGAGTACCTACATGATGGGGCAGTTCCTCCAGTAGTTCACCGTGACATCAAATCACCAAACATTTTGCTGGACCAGTCCATGCATGCCAGGGTTGCAGATTTTGGATTATCAAGAGAAGAAATGGTTACTCGAAATGGAGCCAACATACGTGGAACTTATGGATATCTTGATCCAGAGTATGTGTCCTCACGATCGTTCACAAAGAAGAGTGATGTATACAGCTACGGAGTTTTGCTGTTTGAAATGATTGCTGGCAGAAACCCTCAACAAGGTCTAATGGAATATGTAGAGCTTGCTGCAATCAATGCTGATGGCAAAACTGGATGGGAGGAGATTGCAGATTCTCGATTAGAAGGCGCATTCGATGTGGAGGAGCTCAACGACATGGCTGCTATGGCCTACAGATGCGTAAGCCGAGTTTCCCGCAAGCGCCCAGCAATGAGAGATGTTGTCCAGGCTCTGATCCGTGTGGCGAAACACAGCCAGAGCAAGAAGCATCACAATAGGAGGCCTCCACCAGGTAGAGCAGACGATGAATCTGTCGACTTGGAAGCATCCGAGGTTCAATCTTCGCTCTCCGGCCATCAGAGACAGGAATCAGTTGGGAGTGTCTCTGATCTTGCAGATGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MGRMKGVSEGLIIGITVGVVIGVLLAVGILLCLRYRRSQAQIRSSSSRRASTIPIRANGVNACTILSNSTTGQESPREVEDRGASMWLEGPGRKSVISASGIPKYAYKELQKATSNFTTLLGQGAFGPVYKADLSSGETLAVKVLANNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCAEKGQHMLLYAFMPNGSLASHLYGENIAPLRWDLRVNIALDVARGLEYLHDGAVPPVVHRDIKSPNILLDQSMHARVADFGLSREEMVTRNGANIRGTYGYLDPEYVSSRSFTKKSDVYSYGVLLFEMIAGRNPQQGLMEYVELAAINADGKTGWEEIADSRLEGAFDVEELNDMAAMAYRCVSRVSRKRPAMRDVVQALIRVAKHSQSKKHHNRRPPPGRADDESVDLEASEVQSSLSGHQRQESVGSVSDLADV</aaseq>

Gene Sequence

<dnaseqindica>1..323#1401..1554#1623..1749#1855..1940#2024..2095#2301..2504#2641..2979#ATGGGGAGGATGAAAGGGGTTTCTGAGGGCCTGATCATTGGAATAACAGTTGGAGTGGTGATAGGGGTGCTGCTGGCAGTTGGGATACTTCTGTGCTTGAGGTATCGGCGATCTCAGGCACAGATAAGGAGTAGTAGCTCAAGGAGGGCATCGACGATTCCCATCCGTGCCAATGGTGTTAATGCTTGCACGATACTCTCGAACTCCACTACGGGGCAGGAATCGCCAAGGGAGGTTGAAGATCGCGGAGCATCTATGTGGCTGGAAGGGCCTGGTAGGAAGAGTGTGATATCAGCTTCTGGGATACCCAAATATGCATACAAGTATGTTTCCTTGCACTCTCATGGTTGTTTGTACTAATTTGTATGTTGAACAATTGATCTAGTTTTAGGATTAGTGATGGGCAATTTGTTTATTACTGAAACATTTGGTAATCGATTCCTGTTAACTTTCAAAGTTTAGTGGTTGTTTATCCTCCTTTGACTTCCCACATATTTCTTTACCTACTAATTCTTTTCTTTTAGTTTTGGACTTTTTTTTTTCTGAATGTCACAGTGGAAGTGTACATTAGGAAAGTGGGACCTGGAGAACTTATAGAGAGGGGGTTGTACAATGAGATTTTGCAAGATTTATTTCTAGCATTCTAGATGGGGAGAAAACTGGTGTGAGGACAGGAAAACATGTCAAATATGCATATCTGGATGTAATGATCGATGATATGTCGAATTGGACAACCATGTTGGACCTTATTGTGGTCAATTTCAATATAATTGAGTTATATATTCGATGAAAATGTGCTTCACTTATTAACAGTTGACCATAGCATCCAGCCTCACTCAGGTGTTTTGGTGAATCAAACTGAAGGCCGATGTCTCTCTTTTATTTTTCAAGATCAATAGTTTTTCATCCAATTAAGATCAAGTTCTTTTTAGTTGATAAGCAAATCTTTTGAAACCATGAATTGGTTCATTATTGTTGACAGAGGTTATCTTTCTAAATCACATCGAGAGGAAACATTTAGTTAATTGTAGGAATTGTACTTCCCACGAGATATGCATATTTTATATTTGTAATTTCTTCTTCAATGAGTCTGATAATTTATAAATGTAAGGAGGGTAAAATTAAACCACTAAATGTCAGTAACTATTAGACATCAAAGGAGACTTTTATATCTTATGATTTTAAGTTCAACAAGAACATAGAATTTGCTGATATAAACTTCTCTCAAATTTTACCGGTAATTGGTGCCTCACATATTGATACTTCCAACACAATTATTATCACTAATTTTTTGCTTTCTACATAATTGTGTGCCATTAATTTTATTTTATTTTTTGCAAGACATTCATAAGGTATCTTGTACTATACACTTTCTGAAGTTCATAATTTTCTCTTTATAGAGAGCTGCAGAAGGCCACCAGCAATTTCACAACACTATTGGGTCAAGGAGCCTTTGGTCCTGTTTATAAAGCTGATTTGTCATCTGGTGAAACTCTTGCTGTTAAAGTGCTTGCTAACAATTCAAAGCAAGGTGAAAAGGAGTTTCAAACTGAGGTAAGCCAATCTTTATGCGCCAGAAACTCTGACTGCTTGGTATTTATTTGATAGACTGTTAATTTCAGGTTTTACTTCTTGGACGATTGCACCACAGGAACCTGGTGAATTTGGTTGGCTATTGCGCTGAAAAAGGGCAGCATATGCTATTATATGCATTCATGCCTAATGGAAGCCTTGCATCGCACTTATATGGTATTCATTATCTCCATATGATAGCATGCTATACTTTCTTGAAAGAACCTGTGCCCTCAGTTTTTTTTTTTTTTTGGCTTTCTTAATATCCTTTTTATGGTTTAGGTGAAAACATTGCACCGCTCCGGTGGGATTTGAGGGTAAACATAGCTCTGGATGTTGCTCGGGGCTTGGAGTACCTACATGATGGGGTAGGCTGTTGTATTTCATAATTGGAAGGATGATACATATGAAATGCAACCAGATTCCTTGATCTCATTCAACTCTAGTGCAGGCAGTTCCTCCAGTAGTTCACCGTGACATCAAATCACCAAACATTTTGCTGGACCAGTCCATGCATGCCAGGGTATGTGAAACATCTCTGCTACCCATCATGATATTAAGCACCTATATTCATCAAGTCAGCATCTAGTTTAGTGACATGGTCAACGTAGTACACAATAATGCAATTTTTTGAAGAAATACAGTACTTCTTGGATACCACTGGATATGGTGTCTTATTGTACTAAAATGTTTTATTCTCAGACTAATGAGCACTTTCTGTTGTCCAGGTTGCAGATTTTGGATTATCAAGAGAAGAAATGGTTACTCGAAATGGAGCCAACATACGTGGAACTTATGGATATCTTGATCCAGAGTATGTGTCCTCACGATCGTTCACAAAGAAGAGTGATGTATACAGCTACGGAGTTTTGCTGTTTGAAATGATTGCTGGCAGAAACCCTCAACAAGGTCTAATGGAATATGTAGAGCTTGTAAGGAAGCGCCCTCCTTAGTTCCTTACTCTTATTGTTCAAGAATTTGTTCCTTACTCTTTTTTGTTCAAGAATTGTTTTTTTCTCAGAACATTAAGGCTTGTAATTGCTGACTTACAATGCAATCTATGATCAGGCTGCAATCAATGCTGATGGCAAAACTGGATGGGAGGAGATTGCAGATTCTCGATTAGAAGGCGCATTCGATGTGGAGGAGCTCAACGACATGGCTGCTATGGCCTACAGATGCGTAAGCCGAGTTTCCCGCAAGCGCCCAGCAATGAGAGATGTTGTCCAGGCTCTGATCCGTGTGGCGAAACACAGCCAGAGCAAGAAGCATCACAATAGGAGGCCTCCACCAGGTAGAGCAGACGATGAATCTGTCGACTTGGAAGCATCCGAGGTTCAATCTTCGCTCTCCGGCCATCAGAGACAGGAATCAGTTGGGAGTGTCTCTGATCTTGCAGATGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027690