BGIOSGA027821

From RiceWiki
Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027821| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027821, complete gene.| tag = OsI_274...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA027821

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027821, complete gene.

LocusTag

OsI_27472

Ensembl Transcript ID

BGIOSGA027821-TA

Ensembl Protein ID

BGIOSGA027821-PA

Length

4276

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:71961..76236

Sequence Coding Region

76110..76236),complement(75087..75431,74569..74687),complement(74350..74472,73948..74040)
,complement(73740..73840,73350..73396),complement(73192..73268,71961..72170

Genome Context

<gbrowseImage1> name=IndicaChromosome08:71961..76236 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:71961..76236 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAACAGCATTGTCCCTTTCCTTTCAGTTTGGCTGCAACGGCATGCACCGAGATTTATCCAGGTCATTGTCAATATATTCCTCTCTTCACATCTCGAAATCCTAACATATACAGACGACATGATGGAGCCGAGCCCCCCCACCCGCACAACCACAACCACAACCACAATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCCCAGAGGTTTCGCCGACTGGAGCGCCTCCACCAGCGCCTTCACCTCCCTTGCCGCGCACTCTTCTACTGCCCCCAGCAATGCCGTTCACTACAGCTTCTCCCCCTGCTATGCCTTCTGGACACATTACATGCTCAACAAGAACGCCTACCCCACCTCCTTCCCTGCGCCACACGACGACCACCTGCGCCTTGCCAACAACAATCATCCTACAGACGCACCAGGTCCTGCATCCAGCTACGGGGTCGAGTCTTTTACTTCACCGTCCATGGCACCGAATATTTGCACCCACATGCCTCCCATAGAAGGACCCATATCTGCCAAGGAAGATAAGAAACCAGAGATTTTGCCTAGAGTGGTTAAGAGCAGTGATGAATTGGAAACCAGAAACAGCAATGTTGAATTTCACTCTGAGACAGTTGGTACTCTCCCTGAGTCGAAGCAAGGCCATGACAGTCGTGCTACTAAACTACTCAACTCGGGAGAATACCAAGTCATTCTGCGCAAGGAGCTGACAAAGAGTGATGTTGGAAATGTTGGAAGAATTGTGCTACCCAAGAAGGATGCAGAGGCTAGTCTTCCACCTTTGTTGCAAAGGGATCCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTGACATGGAAGTTTAAGTACAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTCAGTACCCTGTATCCACAACATTCACCGTCCTGGTTGTCTGTGGTGCCTTTCTGCCAGTAGAAACATCAGCCAACAAAAAAAAGAAGTCGAGAACTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCGATAGTTCAAGTAAACACAACTATGTGATATATACCCCATGA</cdnaseq>

Protein Sequence

<aaseq>MEQHCPFPFSLAATACTEIYPGHCQYIPLFTSRNPNIYRRHDGAEPPHPHNHNHNHNIHNSHNHNHNHNAAPHPCHTPTPTPTPRGFADWSASTSAFTSLAAHSSTAPSNAVHYSFSPCYAFWTHYMLNKNAYPTSFPAPHDDHLRLANNNHPTDAPGPASSYGVESFTSPSMAPNICTHMPPIEGPISAKEDKKPEILPRVVKSSDELETRNSNVEFHSETVGTLPESKQGHDSRATKLLNSGEYQVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFQYPVSTTFTVLVVCGAFLPVETSANKKKKSRTGGAGNRTPCLSHAKRALYHMSYTPDSSSKHNYVIYTP</aaseq>

Gene Sequence

<dnaseqindica>1..127#806..1150#1550..1668#1765..1887#2197..2289#2397..2497#2841..2887#2969..3045#4067..4276#ATGGAACAGCATTGTCCCTTTCCTTTCAGTTTGGCTGCAACGGCATGCACCGAGATTTATCCAGGTCATTGTCAATATATTCCTCTCTTCACATCTCGAAATCCTAACATATACAGACGACATGATGGTAAGCAAGCAGCTGTTTGCTCGCTGACTTTTGATGCCAAATTCCCCTATCAATTCATAGCTGAGAATTGCTTCTTTCTATAACATATTAATGTTATCTTCCGATACAACTAGATCAACGTGATAGAGATTATCTGATACCGACGGACAGCACCTTCAAAGGAAGAAGATAATTTTAGGGGAATGCATTTCGATAGCAGCTTCCCCAAGGTGAAAACGTCACATATTCCTTGATTATTAATTTAAAATAACCAACAGAACTAATGCAAAGATTAGGAGGGGGACACATTCGATGCCAAAAGACAATCTAACTAACATGTGTTGTCCATAGGGCTGGACGAAAAGCTCGTGACTCGTTAGCTCGCTCGACTCATAGCTAGCTCGGCTCGGCTCGGCTCGACTCGTTTGGATTTGTCAACGAGCCGAGCTAAGCTTTTAGCTCGTTAGACATAACGAGCCAGCTCGAGCTGGCTCGCGAGCTGCTCGCGAGCCAAACGAGCCGCATGGAAGCACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTTAGGGTGATCAATCATTCCTCACTCTGTCTATTCAATTCATTCACTTCACTTAATTGGCCCATCTATGTATGTATGTAAATGTAATTGACCATGTGCTTGGATTGCAGGAGCCGAGCCCCCCCACCCGCACAACCACAACCACAACCACAATATTCACAATTCTCACAATCACAACCACAATCACAATGCTGCTCCTCACCCTTGTCACACTCCCACTCCCACTCCCACTCCCAGAGGTTTCGCCGACTGGAGCGCCTCCACCAGCGCCTTCACCTCCCTTGCCGCGCACTCTTCTACTGCCCCCAGCAATGCCGTTCACTACAGCTTCTCCCCCTGCTATGCCTTCTGGACACATTACATGCTCAACAAGAACGCCTACCCCACCTCCTTCCCTGCGCCACACGACGACCACCTGCGCCTTGCCAACAACAATCATCCTACAGACGCACCAGGTACGTTAAAAGCTATCTCCTTTCCAACTAAACCAGCATGTACTGCATTGCCTTTTTTTTCCTTTTCCTTTTAAAGCAATAACCAAAATTAATCTTCCGTTGCGTTGTTCAGAGCTACAGATGTTGCTTGTAACAACTAGGAATTTTTACCGACCTAGCTCATTTTAATTATTCATGTGCCTCTGATGTTGAACAAGTAGGTCCATGAGGCATTTACATTATTCCTCTCCATGCTTCCATCAATATGGGTAGTACATCTAGGCTACTGTATTCCACTTTGGCATTAGCTAATAGCCAGGTTTTCTCAGTCATGTACATATGGGGCAGCTATTTGCGTCCCGCCAAATTCTTTCACCCAGCCATCCTCACTTTTTTCCACATATCCTGTTTTAATTACAGGTCCTGCATCCAGCTACGGGGTCGAGTCTTTTACTTCACCGTCCATGGCACCGAATATTTGCACCCACATGCCTCCCATAGAAGGACCCATATCTGCCAAGGAAGATAAGAAACCAGAGGTATATACATCAGAACATTCAAGATTTGGAAAACCCTTCCAGTTTTCATCATCCTCCATAACACATAATCTAACTACCGTAATGGATGCTAACCAGATTTTGCCTAGAGTGGTTAAGAGCAGTGATGAATTGGAAACCAGAAACAGCAATGTTGAATTTCACTCTGAGACAGTTGGTACTCTCCCTGAGTCGAAGCAAGGCCATGACAGTCGTGCTACTGTGAGTAACACACTACACTTAACATGTTGTCTGTATCTGATTTACTACACAAATTTCTATCTTGCATTTAATCTACATTAGGCAAGTACATAGCATAAGTAATGGAGCAAGTATCTATCAATTACTCAATGCCGATATAGTCATTTGAGCAGAAGGGCAAATGAAGCAGCAATTCCTTACTAGTTTAGTAATTCAAGTAGCTTGTAAAGATGATTAGCCAAAACACTGATGCAGTACACAGGCACATACTTCTGTCATAATTAGCAACTTCATTTCCTTTGTGTTCATGGGAGTGTGCTTTTATGCCAGAAACTACTCAACTCGGGAGAATACCAAGTCATTCTGCGCAAGGAGCTGACAAAGAGTGATGTTGGAAATGTTGGAAGAATTGTGCTACCCAAGGTGTGTTCCGTATTTCTGTCTCTTGGAAGTTCTCTAGTATCATTCTGTGAGAACTTTCATGTGGTCTAAACTATGCTTCATAATGTAACTGTCTGAATTTATTTCAGAAGGATGCAGAGGCTAGTCTTCCACCTTTGTTGCAAAGGGATCCTTTGATACTGCACATGGACGACATGGTGCTCCCAGTGACATGGAAGTTTAAGTACAGGTGCCTTTCCTGCCATCTTATGACATCTCTCACATGCGATTTCTGAAAGACAACAAAGAAAAAATGGTTCTGAATTGCAATGACTTAACAAGATGCCTAGATTAAGAAAAAGTGGGAGGTTGAAGGCACTGTATGCATTAAGTTCCACAGCATGTTTAGGAATCTGAAATTTGTAAAGCAGTTCATAGGTTCATACATCTTGTGGCAGCTGCCTGATTGCTAATTCTGGTTCGGTTACATGATCAGTTTTCACAGCATGGAGAAACCGATACATTGCTGCCTAACCTAGATATACTCTAGCACTTGCTACTACTAATTCACAGAGTCAACGATGCTATTTCAGGTACTGGCCAAATAACAAAAGCAGAATGTACATTCTGGATTCTGCAGGTATGATTCAACATGGAAAGTATTGAGTATTTCCTGCGGATGTGGACATGGTAGATTGATATTTCGTATTCATATTGGCAGGTGAATTTCTGAAGACACATGGTCTTCAGGCTGGGGATGTCATCATTATCTACAAAAACTTGGCTCCTGGCAAATTTGTATGCAACCCTTTTCTTTCCTGTTTCTTCCTTTTTGTATATTGCATATCTGACGTCAGCATTTATGGCTTGCAAATCTCAATCATCGCTTGACATAACTGATAAAAATGCTCAGTACAAAAAGTTGAGAAACCTTACTAAATACTACATCCGTTTTTTAATATATGACGCAATTGACTTTTTGACAAACGTTTGATCATTTGTCTTATTCAAATTTTTTGTGCAAATAAATATATATATATAAAGAACATTTCACAATAAATTAAGTCACAATAAAATATATGATAATTACATATTTTTTTGGAATAAAATGAATAGTCAAACGTATCTCAAAAAGTCAACGGTGTCATATATTAAAAAACAGAGGGAGTAAACCAAAATGACAAACATATAGATCACCACTCATGAATATTCTGTGGGATGCACTCAAAGTTGCCATCTCCGTTCATTTTCCCTGAAAAGTATGTTAATAACGATTCTTCGCATATCTTATTGGACCCTTGTGTTTTTTTTACAAAGATTATCCGAGGAGAGAAGGCCATTCATCAGCAGACAACAAATCCCTAGATGCATTTGGGGTTAATTGCAACAGTGTTAGTTGATGCATTTGAAGGGAAGGACGTGGACTTACCATAAGTTGGCAATCCAGGAGAAGTTGAAAGTGTCATCGATTTTTATATCACTGGTGGCCACCATCACATGGACAAAGATTAAAGCGCATGCAGCTTGGACCTGTTTAACTCTGAATGAATGAGGACGAAAAAAAGACAAAAGATTGGTAGAGTATTGGAAGTGTTGGCAATGGGCTTCTACAGCTTATCTTGGGTTGAGAAAAGCACTTGTCAGTTTATTTAATTCAGTTATGTTGGGGAGCTTGACTTGTAGTTTTCAGAACAATATATTTGCAGCTTCTGTAAATATTTTTGGATCTATAAGATAAAAGAGAGTGGTGTGTGATTTTGCTTTTGATGTCATCCATCTATTTCTCATACTAATGCCATGAATGTCTGTTCATTGTCAGCAGTACCCTGTATCCACAACATTCACCGTCCTGGTTGTCTGTGGTGCCTTTCTGCCAGTAGAAACATCAGCCAACAAAAAAAAGAAGTCGAGAACTGGAGGTGCGGGGAATCGAACCCCGTGCCTCTCGCATGCGAAGCGAGCGCTCTACCATATGAGCTACACCCCCGATAGTTCAAGTAAACACAACTATGTGATATATACCCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027821