BGIOSGA027857

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Revision as of 07:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027857| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027857, complete gene.| tag = P0007D0...")
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Gene Name

BGIOSGA027857

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027857, complete gene.

LocusTag

P0007D08.11

Ensembl Transcript ID

BGIOSGA027857-TA

Ensembl Protein ID

BGIOSGA027857-PA

Length

2397

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:547788..550184

Sequence Coding Region

547788..548034,548138..548273,548454..548523,548642..548735,548831..549044
,549160..549301,549480..549650,549990..550184

Genome Context

<gbrowseImage1> name=IndicaChromosome08:547788..550184 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:547788..550184 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTATCACCTCCGCTTCCCGCCGCGCCGGCGCCGCCGCGCTCCCCATCCTCCGACGAATCGGCGGCGCGTTCCGCCGCCCCTTCTCGTCGGAGCCGGACCCGGCATCCTCCCCGGGGTACCACGTCGCCGGCGGGCCCAGCTTCATGCGCGGCGCGGTGTTCTGGGAGCCCGGCCGCCCTCTCACCCTCGAGGACTTCCGCATGCCGCGCCCCAAGGCCGGCGAGCTCCTCATCAAGACCAAAGCTTGTGGAGTTTGCCACTCCGATCTCCATGTTCTCAAGGGTGAGCTCCCATTCTCCAGCCCCTGCGTTGTTGGGCATGAGATCACTGGGGAGGTTGTTGACCATGGTACTCACACCCCTGCTGAGATCATCAACAGGTTCCCAGTTGGCAGTCATGTTGTGGGTGCCTTCATAATGCCCTGTGGGAATTGCTTCTACTGTGTTAAGGGCCAAGAAGATCTGTGTGAGTCTTTCTTTGCATACAACCGTGCTAAAGGAACGCTATACGATGGTCAAACCCGATTATTCCTTCGTAGCAATGGAAAGCCAGTGTACATGTATAGTATGGGTGGGCTTGCAGAATATTGCGTTGTGCCAGCCAACGCACTAGCAGTTCTTCCCAACTCTTTGCCATACACAGAGTCGGCGATTCTAGGATGTGCCGTGTTCACTGCATACGGCGCCCTGAGGCATGCTGCTGAAATGCGTGCTGGGGATTCAGTAGCTGTGATTGGAGTCGGAGGGGTTGGGTCAAGCTGTTTACAGATAGCCAAAGCCTTTGGAGCTTCCGAAGTCATTGCAGTGGATGTTCTTGATGAGAAACTCCAGAATGCTAGAACACTTGGAGCAACCCATACTGTAAATGCTGCAAAAGAAGATGCAGTTGAAAAGATTAAGGAAATTACTGATGGGAGGGGTGTGGATGTAGCTGTGGAAGCACTTGGTAAGGCATTGACATTTTCTCAGTGCGCCAAAAGTGTACGAGATGGAGGCAAAGCTGTTATGATTGGCCTTGCTGCCACAAATGTGATGGGGGAGGTGGATATAACCCGTCTTGTTCGCCGACAGGTGAAGATCATTGGGTCGTATGGTGCAAGGGCCAGGCAAGATCTTCCTCAGATAGTCAAGCTTGCAGAGAGTGGGGCCTTCAATCTTAAGAACACCATATCAAGGAAATGCAAGTTTGAAGAGGCGAACAGCGCTTACGAGGATCTTGACCGTGGCAAGATCGTTGGGCGAGCCGTAGTTGAGATCATGTCGTAG</cdnaseq>

Protein Sequence

<aaseq>MSITSASRRAGAAALPILRRIGGAFRRPFSSEPDPASSPGYHVAGGPSFMRGAVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELPFSSPCVVGHEITGEVVDHGTHTPAEIINRFPVGSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYDGQTRLFLRSNGKPVYMYSMGGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALRHAAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAKEDAVEKIKEITDGRGVDVAVEALGKALTFSQCAKSVRDGGKAVMIGLAATNVMGEVDITRLVRRQVKIIGSYGARARQDLPQIVKLAESGAFNLKNTISRKCKFEEANSAYEDLDRGKIVGRAVVEIMS</aaseq>

Gene Sequence

<dnaseqindica>1..247#351..486#667..736#855..948#1044..1257#1373..1514#1693..1863#2203..2397#ATGTCTATCACCTCCGCTTCCCGCCGCGCCGGCGCCGCCGCGCTCCCCATCCTCCGACGAATCGGCGGCGCGTTCCGCCGCCCCTTCTCGTCGGAGCCGGACCCGGCATCCTCCCCGGGGTACCACGTCGCCGGCGGGCCCAGCTTCATGCGCGGCGCGGTGTTCTGGGAGCCCGGCCGCCCTCTCACCCTCGAGGACTTCCGCATGCCGCGCCCCAAGGCCGGCGAGCTCCTCATCAAGACCAAAGGTCGCATCATTGCAGCCATCTATCGTCTGCTGCTCCTGCGTTTCTTTGTTTCTTTGTTTGTTTCCTCGAATTATTGAGGCTGACGCTGGCCCAATCTGTGCAGCTTGTGGAGTTTGCCACTCCGATCTCCATGTTCTCAAGGGTGAGCTCCCATTCTCCAGCCCCTGCGTTGTTGGGCATGAGATCACTGGGGAGGTTGTTGACCATGGTACTCACACCCCTGCTGAGATCATCAACAGGTTAAGTATATTATACTGATGTGACTGACCCAGCTGGTATTATCAAGAAACAACCTATGCTTGCTTGTTTGTTTAGGCTGGTGAATGTATAGGCATGCGTGTTACTGTAAACTTGAGGTTGTGGATTGTGGATTGTGGACTTGGAATTGATTGATTCTTTCTCCCAAAAACATATTTTAGGTTCCCAGTTGGCAGTCATGTTGTGGGTGCCTTCATAATGCCCTGTGGGAATTGCTTCTACTGTGTTAAGGTAAGTAAATAATAATAGTACCTTCTCCTTCATGCCATTCTTTCCAAGAGAAAAAAAAAAGAAGAAGAGAGGTTGCTTTGCTTTCTTGATTGCACACATGTACATCGACTTGATATAGGGCCAAGAAGATCTGTGTGAGTCTTTCTTTGCATACAACCGTGCTAAAGGAACGCTATACGATGGTCAAACCCGATTATTCCTTCGTAGCAATGGTAATCTTAAATATACAACTCCTCACATGATATGTGGGTAATGATACAGGTATAACTGTGCCTTTGCTTACAGCATTCTTTTTATGCATTTCCAGGAAAGCCAGTGTACATGTATAGTATGGGTGGGCTTGCAGAATATTGCGTTGTGCCAGCCAACGCACTAGCAGTTCTTCCCAACTCTTTGCCATACACAGAGTCGGCGATTCTAGGATGTGCCGTGTTCACTGCATACGGCGCCCTGAGGCATGCTGCTGAAATGCGTGCTGGGGATTCAGTAGCTGTGATTGGAGTCGGAGGGGTTGGGTCAAGGTTAGCTGATATGAGATGTCTTCATCCATGCCTCTCTTTTTTTTTTTTGACCTTTTGAAATAAGCTGAGTGAAATTTTTTACTTTTCGTATGTCCTCATAATTGGAACATTGCAGCTGTTTACAGATAGCCAAAGCCTTTGGAGCTTCCGAAGTCATTGCAGTGGATGTTCTTGATGAGAAACTCCAGAATGCTAGAACACTTGGAGCAACCCATACTGTAAATGCTGCAAAAGAAGATGCAGTTGAAAAGATTAAGGTATTTGTTAACTGTCAAGTTTTCTTAGCTACTTAACCACCAGCAGTTCAAAAACAACTCGAATTCTGTTTTTAATTTCCCGTTGCTGATCTTAATATGCTATTTCCCGTCTTCTTCAAGTGTCCATCTTGAAAATTTCCCATTGAATGTGATTATTTGAATATCTTACTGGCTGCAGGAAATTACTGATGGGAGGGGTGTGGATGTAGCTGTGGAAGCACTTGGTAAGGCATTGACATTTTCTCAGTGCGCCAAAAGTGTACGAGATGGAGGCAAAGCTGTTATGATTGGCCTTGCTGCCACAAATGTGATGGGGGAGGTGGATATAACCCGTCTTGTTCGCCGACAGGTACAGAAACTAGCTCCAATGAAGTACTATTGACTTGGTTTTCTAAGAAAGAGAAGAGAGATACTAATACCTTCTTGGTACAAACAGCAAAGCCATTTGAGCTACTCATTCAGTCTAGATGCAGATACTTTCTTCTTGTTCTGCTTGCAAAAGAGGACCATAACATCTTAAACATAGGAACTACTAAACTGCAACATTGTGATAACACATTGCATTTGTTGTTCTGTTGATTCACCATAAATTTGCAATAGCCCCACACAAAAAAACATAACATCAACTGAATTGCTTTCTTGAATTGTACTATTATGCTTGTTTATTTACATGTTCACATGGGACCAGGTGAAGATCATTGGGTCGTATGGTGCAAGGGCCAGGCAAGATCTTCCTCAGATAGTCAAGCTTGCAGAGAGTGGGGCCTTCAATCTTAAGAACACCATATCAAGGAAATGCAAGTTTGAAGAGGCGAACAGCGCTTACGAGGATCTTGACCGTGGCAAGATCGTTGGGCGAGCCGTAGTTGAGATCATGTCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027857

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA027857&oldid=34114"