BGIOSGA027898

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Revision as of 07:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027898| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027898, complete gene.| tag = OJ1005_...")
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Gene Name

BGIOSGA027898

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027898, complete gene.

LocusTag

OJ1005_B05.21

Ensembl Transcript ID

BGIOSGA027898-TA

Ensembl Protein ID

BGIOSGA027898-PA

Length

3359

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1209511..1212869

Sequence Coding Region

1209511..1209942,1211082..1211184,1211821..1211876,1212000..1212176,1212303..1212416
,1212540..1212869

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1209511..1212869 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1209511..1212869 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCGCGAGGGGGCCTCCTCCTCCTCCGGGAGCAGCAGCTCCCACCATGAGGCCGGCGGAAGGAGAAGCCCTCTCGAGCTCTCCCTGCTGCTCACCGCCGCCGCCGGCGCGGCAGTCGCCGCGGCGGCCACCCCGCGAGACGCGCACGCGGCGTCCGGCGGCGTCATGGGCGGCCGCCGCTCGTCGTCCCCATCATCTTACTGCAGGAGGACGTCGTCGTCGTCGTCATCGTCGTCGTCCTCTTCGTCGTCGTCGTCGTCGCCGTCGTCGCGGGAGGACGAGTCCGTCATCTCGGTGATAGTCGCGGGCGCCGTGGTTGTGGCGTACGGCGTGGCTTGCGTTGGGGCTTACGTGGCGTGCGGTGTGGTTTACATCGCCGCTCACCTCCTCCGGCCCAGGTCGGCGACCACCGTCGTTAAGCTCCAGGTTGCATTTCGTGGGCTGACAAAAATAATACAGAGGGATCTCAACGGGATTGCTAGGAAGGTGGACACTTCCAACCGGAGTTGGGACAAGTTCATGTTGACCGAGACCATATGCTCCTTGAACCGTCACAAAGATATCTGCATCTCTTCAAGCTTATCGGCTGACTTGCAAAAGAGACTGCTTTTCTGGGGTGATTGCTGGGAGAAACATTTTGATAAAATTTCTATCGAGGAGAGGAGCAAGTTTGATGAAGAAACTCTATACAACGTGCAAGGAATCAAGATGAAGAAAAAATATTTGAAACCCGGCCTCGGAAAAGAAAACGAGTATCTGGTGTTAACCATTCTTCTTGCTGCTGAGGGAAAATTGGAGTTCCCCATAGTCAGAAGCGCTTCTGATCTGACCACAGTACTGGGAATTCTCAACTCTATACATGCAAACAAAATTGAGGGTATTCAAGTTTTATGGACTCCACAAAAGATAGGTGATATCCTTCCAGAAGAGAGGCTACTAAAGGACTATCCATATCTTAAGCCCTTATTGAAAGAATCCGATTCCCTTGGAGTTGCCAGTGTAACTGAAATCGAGCAATCTAACCAAAGATCTATAACGGAAGGCCAAGATTCCTTTGCAGTTTCTAGTGTGACCGAAACTATGCAGTCTAACCAAGGATCTGTAATGCAAGACCAATATTTTATTGAAGTTGCTAATGTGACTGATGTTAAGCAGTCTAACCAAGAATCTACAAAGGAAGACCAAGATTCTAAGCAGTCCAACTAA</cdnaseq>

Protein Sequence

<aaseq>MAAREGASSSSGSSSSHHEAGGRRSPLELSLLLTAAAGAAVAAAATPRDAHAASGGVMGGRRSSSPSSYCRRTSSSSSSSSSSSSSSSSPSSREDESVISVIVAGAVVVAYGVACVGAYVACGVVYIAAHLLRPRSATTVVKLQVAFRGLTKIIQRDLNGIARKVDTSNRSWDKFMLTETICSLNRHKDICISSSLSADLQKRLLFWGDCWEKHFDKISIEERSKFDEETLYNVQGIKMKKKYLKPGLGKENEYLVLTILLAAEGKLEFPIVRSASDLTTVLGILNSIHANKIEGIQVLWTPQKIGDILPEERLLKDYPYLKPLLKESDSLGVASVTEIEQSNQRSITEGQDSFAVSSVTETMQSNQGSVMQDQYFIEVANVTDVKQSNQESTKEDQDSKQSN</aaseq>

Gene Sequence

<dnaseqindica>1..432#1572..1674#2311..2366#2490..2666#2793..2906#3030..3359#ATGGCGGCGCGCGAGGGGGCCTCCTCCTCCTCCGGGAGCAGCAGCTCCCACCATGAGGCCGGCGGAAGGAGAAGCCCTCTCGAGCTCTCCCTGCTGCTCACCGCCGCCGCCGGCGCGGCAGTCGCCGCGGCGGCCACCCCGCGAGACGCGCACGCGGCGTCCGGCGGCGTCATGGGCGGCCGCCGCTCGTCGTCCCCATCATCTTACTGCAGGAGGACGTCGTCGTCGTCGTCATCGTCGTCGTCCTCTTCGTCGTCGTCGTCGTCGCCGTCGTCGCGGGAGGACGAGTCCGTCATCTCGGTGATAGTCGCGGGCGCCGTGGTTGTGGCGTACGGCGTGGCTTGCGTTGGGGCTTACGTGGCGTGCGGTGTGGTTTACATCGCCGCTCACCTCCTCCGGCCCAGGTCGGCGACCACCGTCGTTAAGCTCCAGGTTAGTTAGTCTACCATATCACACCCAACCTAGCTTTGAATTGATGATCACGTGCTAATCTAATTGCATCTGTCACAATATGAGGGGAAACTATTTTCATCCCTCGAGGGGATATCCCCTCATTGTATGCATGTCATTCAAATGGTTATAAAAAAATTGAGAAGATATATTAACATGTGATATATCGCTCTACAAACATGCAAGTTCAAATTCAGCTTCTATATCTCGCAACGAAAAAAACAAATTTGACTAAGAATATACGTTAACTAGTTGTAGTTTAATTTATTTTTTCGTTGCGAGATGTAGAAGCTGAATTTGAACTTGCATATTTGTGGAGTAATATATCACATGTTAATACATTTTCTCAATTTTTTTTTCAAATTTTTGCATAATTATTTGAATGACATGCAAATAACAAGAGAATATCTCCTCGATGGATGAAAATCCACTCCCACAATATCAGTACTAATCTAAATTGTATTTGTCACAATTTTACTGATCTAAAAATAAATATACTGTAAGGATATATTTAATATGGATTAATTTGAACTCATTTGATGTTATAGATATTATTAATATTTTTTTCTGTAAAATTGATCAAATTTCAAGGGAGTTGACTTAGGATAATTCAAAGTGACTAAGGATAATAGCATATGAAGTGTTTTCATTGCATTGGTCTTGCGTGTTTCCTTACTCCATCATTCAAGAAGTGCTTCATATGGGTTGTGTGTGAAGTTTGTTGGGTTGCAGTTGATTCGTACGTGCCAAATATTCTCCCCAAATCTAGCACAAAATATTGCATATTTCGCCGTTTCAAGTTCCCTGTAGTACTAAGCTAACAAAAATTAGTTATTTTCCGGTAGTAGAGCTAAAAATAATTGTATTTGTCACAATTTTACTGATCTAAAAATAAATATACCATAAGGATATATTTAAAATGGATTCATTTGAACTAATTTGATGTTATAGAGACTAGCAAAAATATAATTTCATCTGTTACAATTTCACTAATCTTATATTGTAATTGTCACAATTTCAATAGTCTAATTTGCATTTGTCACACAATTGGTATGTATGCATCTATCGCTACACTAATCTCGTTGGGGGTTTGCGATTAAATTGTCTGAATTTTTTTTCAGGTTGCATTTCGTGGGCTGACAAAAATAATACAGAGGGATCTCAACGGGATTGCTAGGAAGGTGGACACTTCCAACCGGAGTTGGGACAAGTTCATGTTGACCGGTAATGCGGTTTCTAAATTCTTGTTTGCACCTATATATGGTTAATGCATCCTACGTTCGTAACCAGTCTTTTCTTTAGCTTTGAATTGAAGTCTGTCTTTTGTTTAGCTTTAAAGTCATCAGCTTCAGTCTTTCTTTTCTTTTTCAGTTATACATTTGATTCTATATATACTGCAATTTGCGATTAGATATACATTTGATCTGCAATTCTGATCAAATGGTATATACCCAATTCAACTTCAACAGAAGTTAGCTTGGGGTAGCATATAGGTATCTCAAGAGCCAGACCGCAGCTGTGAAGTGGCGATATCTTGAACTGAACTCGATTTTTGTTCTTCTTTCTTCAATCATAGCTAGATAGGTCATTTATATTTGACCTTTCATGCGCATGTGTGTGCAGAACATTTCAACAATCATCCAACAATGGTATCTCTGTAATCTGCATATATGTCTCTAGTAGATATGTACAATTTGTATCACTAATACATCAACTGCTAGCTTAGCTTTGGCTGTGTATATCCACTTTGGATATAGAGGCTGGATTTTATCCATTATCTTAAAAAAACTGCTAGCTTAGCTTGTTTATCATTCCTTGGTAGTTTTGTTTATGTATGTTCCTTGCTCACCATTTGTACAGAGACCATATGCTCCTTGAACCGTCACAAAGATATCTGCATCTCTTCAAGCTTATCGGTAAGAAATTTACACAATTTTATTACTCTTTTGGCGATATATAACATTCTTATTCCTACCTAATTAATTATTCCCTTTGAGATGACAAACCTCATGTAATTTGGGCGTGCCATTTTAACTTAGGCTGACTTGCAAAAGAGACTGCTTTTCTGGGGTGATTGCTGGGAGAAACATTTTGATAAAATTTCTATCGAGGAGAGGAGCAAGTTTGATGAAGAAACTCTATACAACGTGCAAGGAATCAAGATGAAGAAAAAATATTTGAAACCCGGCCTCGGAAAAGAAAACGAGTATCTGGTGGTATGTATATATAAACTCTCCATGGCTTATCAAATGCATTTACACATGAATTTCTTTTGATCGAGGCATGTTGGTTACATTCTTTAACATATATATGATCTTGGGATGATTGGACAAATCATGCAGTTAACCATTCTTCTTGCTGCTGAGGGAAAATTGGAGTTCCCCATAGTCAGAAGCGCTTCTGATCTGACCACAGTACTGGGAATTCTCAACTCTATACATGCAAACAAAATTGAGGTATAATTTTCTTAAGTTTGAGCAGATGCTTCTACAGATGAGATTAGGGAACAGTAATAGTTTGTCAAATGCTTGCTTACTCAATCATTCCTAATTGGATTTGCATTGGACATATTGTTTCAGGGTATTCAAGTTTTATGGACTCCACAAAAGATAGGTGATATCCTTCCAGAAGAGAGGCTACTAAAGGACTATCCATATCTTAAGCCCTTATTGAAAGAATCCGATTCCCTTGGAGTTGCCAGTGTAACTGAAATCGAGCAATCTAACCAAAGATCTATAACGGAAGGCCAAGATTCCTTTGCAGTTTCTAGTGTGACCGAAACTATGCAGTCTAACCAAGGATCTGTAATGCAAGACCAATATTTTATTGAAGTTGCTAATGTGACTGATGTTAAGCAGTCTAACCAAGAATCTACAAAGGAAGACCAAGATTCTAAGCAGTCCAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027898