BGIOSGA027951

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Revision as of 07:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027951| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027951, complete gene.| tag = P0680F0...")
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Gene Name

BGIOSGA027951

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027951, complete gene.

LocusTag

P0680F05.45

Ensembl Transcript ID

BGIOSGA027951-TA

Ensembl Protein ID

BGIOSGA027951-PA

Length

2988

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2120126..2123113

Sequence Coding Region

2120126..2120491,2121160..2121516,2121626..2122068,2122150..2122244,2122938..2123113

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2120126..2123113 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2120126..2123113 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGCCGCAGCCGCTGTCGGGAACCCTAACGCGGCTGCCGCCGCTGCGTCGGTCTCGGCGTCGAGGGTCGGTGCGGGGGCGCTGCGCGCGGGGGGTTTGAGGGTGGCGGCGGGGGGAAGTGTGGCGAGGAGGGGAGGGGCTGTGGTGGCGGCGGCAATGCGGCCGGCGAAGGCGGTGGCGTCGCCGGCGAAGGAGGCGGCCGGGGAGGTGAACGGGGCGGCGCCGGGGGGGTTCGCGAGGCCCGACGCGTTCGGGAGGTTCGGGAAGTTCGGGGGCAAGTACGTGCCCGAGACGCTGATGCACGCGCTCACCGAGCTCGAGGCCGCGTTCCACGCCCTCGCCGGCGACGAGGATTTCCAGAAAGAACTTGATGGTATCCTCAAGGATTACGTCGGCCGTGAGACCCCGCTGTACTTTGCGGAGCGATTGACTGAGCACTACAAGCGCGCTGATGGCACAGGCCCCAAGATTTACCTCAAGAGGGAGGATCTTAACCACACTGGCGCCCACAAGATCAACAATGCTGTCGCGCAAGTCTTGCTTGCCAAGCGGCTTGGAAAGGAACGTATCATCGCTGAGACTGGCGCTGGCCAGCACGGTGTTGCCACTGCCACGGTGTGCGCGAGGTTTGGGCTGCAGTGCATCATCTACATGGGTGCTCAGGATATGGAGAGGCAGGCACTTAATGTTTTCAGGATGAAGCTTCTTGGAGCAGAGGTGAGGGCAGTACATTCTGGGACAGCAACTTTGAAGGATGCCACCTCGGAGGCCATCCGCGACTGGGTCACCAACGTCGAGAACACTCACTACATTTTGGGATCAGTTGCTGGTCCACACCCATACCCGATGATGGTGAGAGAGTTCCATAAGGTGATTGGCAAGGAGACCCGTAGACAGGCCATGGAGAAGTGGGGTGGCAAGCCTGATGTCTTGGTTGCTTGTGTTGGTGGTGGATCAAATGCCATGGGTCTCTTCCATGAGTTCGTTGATGATCAAGATATAAGAATGATTGGAGTGGAGGCTGCTGGCTATGGTGTAGACACTGACAAGCATGCTGCCACTTTGACAAAGGGAGAAGTGGGAGTTCTCCATGGATCATTGAGTTATGTGTTGCAGGATGATGATGGACAAGTTATTGAACCCCACTCCATTAGTGCTGGGCTGGACTACCCTGGTGTTGGGCCTGAGCATAGCTTTTTGAAGGATATTGGACGTGCTGAATATGACAGTGTGACAGATCAGGAGGCACTGGATGCTTTCAAGCGCGTCTCTCGGCTGGAGGGCATCATCCCTGCTCTGGAGACATCCCATGCGCTCGCCTACCTGGAGAAGCTCTGCCCAACGCTGCCCGACGGCGTGAGGGTGGTGGTGAACTGCAGTGGAAGAGGAGACAAGGATGTCCACACAGCCAGCAAGTACCTTGATGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAVGNPNAAAAAASVSASRVGAGALRAGGLRVAAGGSVARRGGAVVAAAMRPAKAVASPAKEAAGEVNGAAPGGFARPDAFGRFGKFGGKYVPETLMHALTELEAAFHALAGDEDFQKELDGILKDYVGRETPLYFAERLTEHYKRADGTGPKIYLKREDLNHTGAHKINNAVAQVLLAKRLGKERIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVENTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDQDIRMIGVEAAGYGVDTDKHAATLTKGEVGVLHGSLSYVLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVVNCSGRGDKDVHTASKYLDV</aaseq>

Gene Sequence

<dnaseqindica>1..366#1035..1391#1501..1943#2025..2119#2813..2988#ATGGCCGCCGCCGCAGCCGCTGTCGGGAACCCTAACGCGGCTGCCGCCGCTGCGTCGGTCTCGGCGTCGAGGGTCGGTGCGGGGGCGCTGCGCGCGGGGGGTTTGAGGGTGGCGGCGGGGGGAAGTGTGGCGAGGAGGGGAGGGGCTGTGGTGGCGGCGGCAATGCGGCCGGCGAAGGCGGTGGCGTCGCCGGCGAAGGAGGCGGCCGGGGAGGTGAACGGGGCGGCGCCGGGGGGGTTCGCGAGGCCCGACGCGTTCGGGAGGTTCGGGAAGTTCGGGGGCAAGTACGTGCCCGAGACGCTGATGCACGCGCTCACCGAGCTCGAGGCCGCGTTCCACGCCCTCGCCGGCGACGAGGATTTCCAGGTAACCGCCCGCCGTGCTGGATCCCCCCTCCGATTTAGTGGATTTGGTGCTCGCTTATTCGATTCGCGAAGTATATTTCGTTTGGGTTTTATTTTCTTCAACCCCCTTGGAAAACTCCACCATTTCATTTCGTCGCCGAATTGGTTGATGGTAGGAGATGTTGATTTGCAAGATTTAGTCCGTATATTTTGTTTTTTTTTTTGCGGATTAATGGCGATTGCTTCGATTGTATCCTTATAGTTTGTTTTTTTTTGTGTGTGGATTAACGCTAGTAATGCGTGATACTTTGTGTGTTCGAGATCTCTGGTTTGTGGTAGAGGGGAGAAGTCACATCAATTTGCAGAACCAATCGTCGTTTGAGACAGATTGATTTTTTGACGAAGATTCGGTTTTCGTCTGTGTCCCTTTCCGACAACTGCAGCCACATGACTTTTGAGCCCCTATTCTTCAGACAGCGGTTTCACTGTATTTGATCTGTAGTTGCATCACCTTACAGAGACCAAATGCATTTCGATAGTTTGTTTCATTTATCACTGCAATGCCTGCAACTTCATATGATTCCTGAATCATGCGAAATGTTTAGAAGTGGTAGTAGTCATTTTGATTGCTAGGGAGATTATGAAATGACAAGAGAGTTGTGTTTGACACCACCTTCCTGCTCTTTGCAGAAAGAACTTGATGGTATCCTCAAGGATTACGTCGGCCGTGAGACCCCGCTGTACTTTGCGGAGCGATTGACTGAGCACTACAAGCGCGCTGATGGCACAGGCCCCAAGATTTACCTCAAGAGGGAGGATCTTAACCACACTGGCGCCCACAAGATCAACAATGCTGTCGCGCAAGTCTTGCTTGCCAAGCGGCTTGGAAAGGAACGTATCATCGCTGAGACTGGCGCTGGCCAGCACGGTGTTGCCACTGCCACGGTGTGCGCGAGGTTTGGGCTGCAGTGCATCATCTACATGGGTGCTCAGGATATGGAGAGGCAGGCACTTAATGTTTTCAGGATGAAGCTTCTTGGAGCAGAGGTACGATGGAAACTTGTGCATCTTTGTGCTTGCAATCATGTACTCTTGTTTCGATATGAATGTACAATTGTTTCTCAACTTGATTTGGTGATCCCTTTTGCTGAAACAGGTGAGGGCAGTACATTCTGGGACAGCAACTTTGAAGGATGCCACCTCGGAGGCCATCCGCGACTGGGTCACCAACGTCGAGAACACTCACTACATTTTGGGATCAGTTGCTGGTCCACACCCATACCCGATGATGGTGAGAGAGTTCCATAAGGTGATTGGCAAGGAGACCCGTAGACAGGCCATGGAGAAGTGGGGTGGCAAGCCTGATGTCTTGGTTGCTTGTGTTGGTGGTGGATCAAATGCCATGGGTCTCTTCCATGAGTTCGTTGATGATCAAGATATAAGAATGATTGGAGTGGAGGCTGCTGGCTATGGTGTAGACACTGACAAGCATGCTGCCACTTTGACAAAGGGAGAAGTGGGAGTTCTCCATGGATCATTGAGTTATGTGTTGCAGGATGATGATGGACAAGTTATTGAACCCCACTCCATTAGTGCTGGGTGAGTATTCTATTGTTGGCATTGACAGTAATTCATTTTTACAGCAGTTGGGCTAATCATCTATGCTGTTTTGAATGATAGGCTGGACTACCCTGGTGTTGGGCCTGAGCATAGCTTTTTGAAGGATATTGGACGTGCTGAATATGACAGTGTGACAGATCAGGAGGCACTGGATGGTATGTGTTTCAGTGTCACTATCTACCAGTTCTCTTCTCTGATATTTTCCTTCCACTTGATAAATGCCAATAGTATATCTGTTTGATGGTGGGGAACTGGGGACTGCTGATGAGTAAGAGTAGGCTAATAGAACCAACAAATGTTAAAAACTGTTATTCTAAATGGCATATATTGTGAATGTTCTGAACTTTCTTGATACAAGTTTAAGCAGGGCTAAGGCACCAATATTGTTGTTTGGCCCCTTTACCATCTTAGTGATATCAGAGCGACTATGGTTTGGTTGTCTGTAACTCTCTATCTGATTCACGTGTTAGACAAAAACTGATTTACACTGGAAATTGAGCTTTGCGGTCGAGTTAGTCGGGTATCCGAAAGTGACCCTGAATTATAGATAAGACCAGGCAAGTTCTTAACATGCTGACTCAGTCGTTTGCAAACCGTCAGTCTGCCACACACATATGTTAAACATTTAGTTGATGTTCTGATCTTGATTGTTGCAACTTGTTTTAACATAATCCCAATTACTAAAATGCGTAAAGTTATGTTGGAAGTCTTTCACATCTTCACTGACATAATTATAAACATTTACTAGTTCATGTCCCAATCTTTGATTAATTTTGCAATATCTAACTCTTTAAGTGCTATGCTCAAAATCCAACTAATTCCTTTTCGAATGCTATCTTCACATGCAGCTTTCAAGCGCGTCTCTCGGCTGGAGGGCATCATCCCTGCTCTGGAGACATCCCATGCGCTCGCCTACCTGGAGAAGCTCTGCCCAACGCTGCCCGACGGCGTGAGGGTGGTGGTGAACTGCAGTGGAAGAGGAGACAAGGATGTCCACACAGCCAGCAAGTACCTTGATGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027951