BGIOSGA027971

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Revision as of 07:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA027971| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA027971, complete gene.| tag = P0473D0...")
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Gene Name

BGIOSGA027971

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027971, complete gene.

LocusTag

P0473D02.40-2

Ensembl Transcript ID

BGIOSGA027971-TA

Ensembl Protein ID

BGIOSGA027971-PA

Length

2945

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2490090..2493034

Sequence Coding Region

2490090..2490732,2491266..2491341,2491454..2491569,2492469..2493034

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2490090..2493034 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2490090..2493034 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGAAGAGCTGGGGGCTCGGGCGGCCGTCGGGTGACCGGCGGTGGCTGCTCCCCTTCGCCGCGAGCCTCCTCGTCTCGGCGACCCTCTTCCTCGCCGCGGCATGCGGCCTCTTCTCCCCGCCCTCTCTCGCCGACGGCGACGACGACTCCATCCTCATCGACGTCGCCACCTGGGACACCGCCTCCGCCGCAGAATCCGAGATCAAGAACCGCCTCCTCGACTCCAACTCCGACTCCGACGACGGCGACAACCCGGACGACGCGGCGGTGAACTCGGACGCCTCCTCCGCGGATCCCCCGCGGATCGCCTACCTCCTGGAGGGAACCAAGGGGGACGGGGCGCGGATGAGGCGGGCGCTGCAGGCGATCTACCACCCGCGGAACCAGTACATCCTCCACCTCGATCTGGAGGCGCCTCCGCGGGAGCGGATCGACCTGGCCATGTACGTCAAGGGGGACGCCATGTTCAGCGAGGTCGGGAACGTGAGGGTCATCGCCAAGGGCAACCTGGTCACCTACAAGGGGCCAACCATGGTGGCCTGCACGCTGCACGCCGTCTCCATCCTCCTCAAGGAGGGTCTGGAGTGGGACTGGTTCATCAACCTCAGCGCCTCCGATTACCCCCTCGTCACGCAGGATGATATACTTCATGTGTTCTCTTCCTTGCCGAGAAATCTTAATTTTATAGAACACATGCAACTATCTGGTTGGAAAGTGATTTCAAGAGCAAAACCTATTGTTGTGGACCCAGGGCTCTATCTATCAAAAAAGTTCGATCTTACCATGACTACTGAGCGGCGAGAATTGCCAACATCTTTCAAGTTATATACTGGTTCTGCTTGGATAATGCTCACAAAAACCTTCCTCGAGTACTGCATATGGGGATGGGACAATCTCCCACGGACACTCCTTATGTACTATGTTAACTTCATCTCCTCTCCAGAAGGTTATTTCCACACCGTCATCTGCAACTCGGACGAGTTTCGGGGCACTGCGGTTGGCCATGACCTGCACTACATTGCTTGGGACTACCCTCCAAAGCAACATCCAAATATGCTCTCCATGAAGGACTTCAACAAGATGGTCAAGAGCGGCGCGCCGTTTGCACGGAAGTTTCCCAAGGATGACAAGGTCCTGGACAAAATCGACCGTGAGCTGCTGCACCGCTCCGAAGGCCAGTTCACCCCCGGAGCATGGTGCGACGGGAGCTCTGAAGGAGGAGCTGATCCATGTTCCTCAAGGGGTGAAGATTCGGTATTCGAGCCTAGTCCCGGTGCCGAGAGGTTGCGAGGCCTCATGAAGAAGGTGCTTTCATGGGATTACCGCAATGGCAGCTGCTCGTCGCTCGGTTACGATCAGACAAAACGAGATTGGTATGTTCCAAAAGGTAGAGGATAA</cdnaseq>

Protein Sequence

<aaseq>MRKSWGLGRPSGDRRWLLPFAASLLVSATLFLAAACGLFSPPSLADGDDDSILIDVATWDTASAAESEIKNRLLDSNSDSDDGDNPDDAAVNSDASSADPPRIAYLLEGTKGDGARMRRALQAIYHPRNQYILHLDLEAPPRERIDLAMYVKGDAMFSEVGNVRVIAKGNLVTYKGPTMVACTLHAVSILLKEGLEWDWFINLSASDYPLVTQDDILHVFSSLPRNLNFIEHMQLSGWKVISRAKPIVVDPGLYLSKKFDLTMTTERRELPTSFKLYTGSAWIMLTKTFLEYCIWGWDNLPRTLLMYYVNFISSPEGYFHTVICNSDEFRGTAVGHDLHYIAWDYPPKQHPNMLSMKDFNKMVKSGAPFARKFPKDDKVLDKIDRELLHRSEGQFTPGAWCDGSSEGGADPCSSRGEDSVFEPSPGAERLRGLMKKVLSWDYRNGSCSSLGYDQTKRDWYVPKGRG</aaseq>

Gene Sequence

<dnaseqindica>1..643#1177..1252#1365..1480#2380..2945#ATGAGGAAGAGCTGGGGGCTCGGGCGGCCGTCGGGTGACCGGCGGTGGCTGCTCCCCTTCGCCGCGAGCCTCCTCGTCTCGGCGACCCTCTTCCTCGCCGCGGCATGCGGCCTCTTCTCCCCGCCCTCTCTCGCCGACGGCGACGACGACTCCATCCTCATCGACGTCGCCACCTGGGACACCGCCTCCGCCGCAGAATCCGAGATCAAGAACCGCCTCCTCGACTCCAACTCCGACTCCGACGACGGCGACAACCCGGACGACGCGGCGGTGAACTCGGACGCCTCCTCCGCGGATCCCCCGCGGATCGCCTACCTCCTGGAGGGAACCAAGGGGGACGGGGCGCGGATGAGGCGGGCGCTGCAGGCGATCTACCACCCGCGGAACCAGTACATCCTCCACCTCGATCTGGAGGCGCCTCCGCGGGAGCGGATCGACCTGGCCATGTACGTCAAGGGGGACGCCATGTTCAGCGAGGTCGGGAACGTGAGGGTCATCGCCAAGGGCAACCTGGTCACCTACAAGGGGCCAACCATGGTGGCCTGCACGCTGCACGCCGTCTCCATCCTCCTCAAGGAGGGTCTGGAGTGGGACTGGTTCATCAACCTCAGCGCCTCCGATTACCCCCTCGTCACGCAGGATGGTCAGTGCTCTGATTACTCTGCTGAATGAATTTTAGCTTACTTTGTGTGTTGTGCTTGTTCTAGAATGTAGAGATGTTTTGTTAATTAGCTATGAAATGCCACCGAATTTGCCTCTAGGATTGTCTACTTGATGACAAAGGATGGTCAGTGTTCTTCAGGTCAGCTGAATTTCAATTACATATTGTTGTGTTTGTTCTAGGATGTGGAGATATTTTCTTAGCTATGGAGTGCCACTGAAAAGATTGGAATTTAGGATTTGCCTCTAGGATAGCATTGTTGAGGGCAGCAATTAGCATCTGTGTAACTGTAATGGTTAAATTCGTTGTGTATGCTATAGCCTATCTGATAGCTCAACTAGATTTCTTTGCATTGGCATCAGTTATGTAGAGCTTGCTAGCTACTATTAGCAAGCTTCAGATTCAGGAAAATGAAAGTGTGCTGTAATGAAAGCTTTAATCCTCATTGAGGATATTGCAACATTCAGTGGCATTGTATAAGTATTTGCATGGCTAAACGTTATTTTTCTCTGCAGATATACTTCATGTGTTCTCTTCCTTGCCGAGAAATCTTAATTTTATAGAACACATGCAACTATCTGGTTGGAAAGTGTAAGTTTCCTTCTAGTCTTCAGTATTTTCAATTTTTTTCACGTTATCTAGTTCTTTCTACTTTTGATTATCCAGATTACTTGTTCTGATGCTTTATGTGGTTTTCTCACAGGATTTCAAGAGCAAAACCTATTGTTGTGGACCCAGGGCTCTATCTATCAAAAAAGTTCGATCTTACCATGACTACTGAGCGGCGAGAATTGCCAACATCTTTCAAGTTATATACTGGTGAGCATGTTTCTGATTTCTATATGTCTTACTTGGCATATTAGAAAGCTATTATGATTCTGCCCACAAGTTAACGATGCATTCATGCAGCGATTGGCATGGGTATGGAATCTAAATATTTATAATACTATTATTCCAAACTGACCTTTGAATAGTGCTGGTTTGTAAGTAATTACTTCATGGTAGCAGACAGTAGCGTTGAATCCTTGATTGACCAATATTGATTGCAATAGACCATTTCTTATTGTTAGCATTAGTGTGTGTCCTCTTGCTTTTCACTATGTCCACATGCCCTCTTATGTTTGCGAAAATAAATAAGTAGACATTATTTGCAAAAATAAATAAGTAGAGGGAGAGAGAGAGAACAGAGGATTTTTGTTGTTGTTGTTTTGAGTTAAAACAGAGGATGTTGGATTGAAGTATCAATCTTGACATCGGAGTTATCAATAATTTTCAAAGCAAGCCCTTACAGTTTAGAATGCACCAAGATGTTTTGAAATGAGCTACTTTTCCTGTTGACCACAATATGGCTTCATTTCCTGCTTGCTTCCTTCCTGTCATCATTTTTTGTTTGACTAGATCTGGTATTCCGATGAAATGGCAGATCAAATCTTCCATTAGCACTGACAAAATAAGAAGTTTGATCTCTCTGTTCAAAACGCCTAGGGGTGATGCAGAATAAACAAATGCTCTATGTGAAGTGTAAGGGCGTTATGCAGTTTTTAGCAAACATATTTCTATTTCGGTTGTGAAATCAAAATATTGTTTTTATTAATTACCTGTTTATACGAGAGGCACATCAGCATCATTCTATCTTGTACGCATTACATGTTTCCTGATACAAAACACACAAGACTCTTAAATGTATCTTAACATCAGAGTCGTCTTTTTATCGACAGGTTCTGCTTGGATAATGCTCACAAAAACCTTCCTCGAGTACTGCATATGGGGATGGGACAATCTCCCACGGACACTCCTTATGTACTATGTTAACTTCATCTCCTCTCCAGAAGGTTATTTCCACACCGTCATCTGCAACTCGGACGAGTTTCGGGGCACTGCGGTTGGCCATGACCTGCACTACATTGCTTGGGACTACCCTCCAAAGCAACATCCAAATATGCTCTCCATGAAGGACTTCAACAAGATGGTCAAGAGCGGCGCGCCGTTTGCACGGAAGTTTCCCAAGGATGACAAGGTCCTGGACAAAATCGACCGTGAGCTGCTGCACCGCTCCGAAGGCCAGTTCACCCCCGGAGCATGGTGCGACGGGAGCTCTGAAGGAGGAGCTGATCCATGTTCCTCAAGGGGTGAAGATTCGGTATTCGAGCCTAGTCCCGGTGCCGAGAGGTTGCGAGGCCTCATGAAGAAGGTGCTTTCATGGGATTACCGCAATGGCAGCTGCTCGTCGCTCGGTTACGATCAGACAAAACGAGATTGGTATGTTCCAAAAGGTAGAGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027971