BGIOSGA028065

From RiceWiki
Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028065| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028065, complete gene.| tag = OS08G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028065

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028065, complete gene.

LocusTag

OS08G0170100

Ensembl Transcript ID

BGIOSGA028065-TA

Ensembl Protein ID

BGIOSGA028065-PA

Length

3822

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4371357..4375178

Sequence Coding Region

4371357..4372192,4373147..4375178

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4371357..4375178 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4371357..4375178 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCTGGTTACAGGGGTGCTGGGCAGTTTGCTCCCCAAGCTGGGCGAGCTGCTCAAAGACGAGTATGACCTGCAGAGGGGCACGAGAGAGAAGATCAAGTCTCTGTCGCGGGAGCTCGAGAGCGTGCACGCTGTCCTCCGTATTGTCGGCGAGGTGCCATCGGAGCAGCTCGACGAGCTGGTCAAGCTCTGGGCACGTGATGTGAGGGAGCTGTCCTATGACATGGAGGACATCGTCGACACCTTCTTGGTGCGTTTCAATGACGGTCATGAGCCCGATGACCCACGGGTGCTCAGGCGCCTCCGCAAGAAGATGAGCAAACTGTTCAAGAAAGCCAAGGATCGCCGCGAGATTGCTGGCGCGATACGAAGAATCAATGAGAAGCTCCAGGAGGTGGCAACCAGGCGTGCCAGGTACAGAGTCGACAGCATTGTCACAAAGCCTGCAGGCCCAGTGAGCATCGATCCTCGCATTCAGGCTCTGTACAAAAGGTCAACAGAGCTTATTGGCGTTGACGGACCAATGGACAAGATCATAAACATGCTATCACCTAGGAATGATATTCATCTGTCTGATAAGAAGAAGATTATCTCAATTGTGGGATTTGGAGGACTAGGAAAGACCACCCTTGCCAAAGCAGTCTATGACAAGCTTAAACCAGATTTCGATTGTGGGGCTTTTGTTCCGGTCGGTCGGAATCCTGACATGAAAAAAGTTTTAAGGGACATTCTGATTGATCTTAACAAGCAAAACTATATGCATTCAAATACAACGACGACATTGGATGAAAGGCAGCTCATCAACGGAATCAAGGATCTAGTCGAGAAAAAGAGGAGCATTGTTATTATTGATGACATATGGGATAAGAAATCATGGGAATTAATCAGATGTGCACTGCAAGATAGTAATTATGGAAGTAGAGTAGTCGTAACTACTCGTATTTCTGAAGTTGCCACACATGCGGGTTGTGTTTACAATATGGAGCCACTTTCTCGTGATGACTCTGAAAAATTGTTGTACACAAGAATAGCTAGTGCTGAAGGCAAATGTCTTACTAGACCATCAGCCGTGGCATGTGAGAAAATTTTGAACAAATGTGACGGTGTGCCATTAGCTATAATAACAATAGCTAGTCTGTTGGCGAACAAACCCGAAGAGGATTGGTCTGAGGTGTACAATTCCATTGGTTTTGGGCATGGAGGTAATAACGATGTAGAGAATACTAGAAAGATATTGTCTTTTAGCTACTATGATCTGCCTTCACATCTAAAGGCTTGCCTATTGTATCTAAGCATATTTTCTGAAGATGTTGAGATCGATAAAAATATTTTGATATGGAAATGGATAGCTGAAGGTTTTGTTCAAGACGAACAAGCAGCAGGGGTAGGGTTATTTGAGCTTGGAGAGGGTTGTTTCAACGAGCTGATAAACAGAAACATGATCATGCCAGTGGAGGTACAATATCAAGGGTATCAATCTAAGGCACGCTATAATGAAGGGTATGTATATGGTTGCCGTGTCCACGATATGATGCTTGATTTGATCTGTTCATTGTCGAAGGAAAAAAATTTTGTTACCCTGGTGGACAGCTATGAGCAAGTGGAACTTCCGCTGAGCCATGCTCGCAGGTTAGCCATGCAGAGTATGAGTATTAAAGAGATAAACCGTCTTCAGCTGCCTAATATGGGCATGGAGCAAGTGAGGTCCTTTTTGGCTAATCGTTGTTATGGTATTAGTTTGGCATTCTCAGACTTTCGAGTGTTACGTATATTAGCTCTAGAATATTGTCAGGGCAAAATTAATTTGTCGCATTTCAGGAGTTTATATCACCTGAGGTACCTGGGGCTAGTCAATGCGGAAATTACAGAGCTCCCCAAGGAAGTGGGAGATCTGATGTTTCTCCAGACATTGGATCTACGAGAAACTTCTATACTGGAGCTGCCAGAATCTGTGGGTCTGCTGACACAACTGTTATGCCTATATGTTGATCATCGTACATGGGCGCCAGTTGATCTGATCGGGAAGCTGACGTCCCTGCAAGAGCTGTGCATAAGGCCTGCTTATGCGTACGACAGGTTCTACGATGACAAGGCCAATGGTATGAGACAGTTTGTGAAGGCGTTGGGCAGGCTGGGAGAATTGAGGGTGCTCCAGACTCAGATTGATATATTGGATGATAGCATGGAGAAAGATTTGCTAGAGTCTCTAGACAATCTGCAGAAGATACGGTCCTTGGAAATTTTGGGGGCATCACGAGGGTTGAACGTCGAATGGACTAGAACAGGATTCATTTCCCCTAGGCATCTCCAGCGCCTGTATTTGGAATGCCTTGAGTTTTCTGGACTGCCTGCATGGATTAACTCGTCACTTCTTCCAAACCTCTCCTATCTAAATATGACAATGGAGGTTGTGCAAGAGCAGGACATGGAAACCCTTGGGATGTTTCCTATACTCTGTTACCTAAAATTATATTCGCGTTGTACAAAGCTAGTAAGCTTTAAGCATACAAGCAATGCAGGCTACTTCCAGAAGTTGAAATCCTTCAAGATTGTTGGTTCATCAGTCAGGTTTGATCTGAGTGGCTGCGACATAGAATCTTCTTTCATGCCAAGCCTTGAAACCTTTGAGACTGATGTCCATGTGCGCTTCCTAAAAGATGCGAACATGCTTGGTTTCGACAAGCTTGGCTTGGAGAACCTCCCAAGTTCGCTAAAGAGAATCATTGTTGTAATCTGCTGTCGAGATGCCAGTGATGCAGAGGTTGAGGAAGCACAGGCGGCATTGGAGCATGCAACTGACAGCCATGCCAACAGTCCTAAACTTACAATTATGAGATATGGAGTACAAATTAAACGGCCCTTGTGA</cdnaseq>

Protein Sequence

<aaseq>MELVTGVLGSLLPKLGELLKDEYDLQRGTREKIKSLSRELESVHAVLRIVGEVPSEQLDELVKLWARDVRELSYDMEDIVDTFLVRFNDGHEPDDPRVLRRLRKKMSKLFKKAKDRREIAGAIRRINEKLQEVATRRARYRVDSIVTKPAGPVSIDPRIQALYKRSTELIGVDGPMDKIINMLSPRNDIHLSDKKKIISIVGFGGLGKTTLAKAVYDKLKPDFDCGAFVPVGRNPDMKKVLRDILIDLNKQNYMHSNTTTTLDERQLINGIKDLVEKKRSIVIIDDIWDKKSWELIRCALQDSNYGSRVVVTTRISEVATHAGCVYNMEPLSRDDSEKLLYTRIASAEGKCLTRPSAVACEKILNKCDGVPLAIITIASLLANKPEEDWSEVYNSIGFGHGGNNDVENTRKILSFSYYDLPSHLKACLLYLSIFSEDVEIDKNILIWKWIAEGFVQDEQAAGVGLFELGEGCFNELINRNMIMPVEVQYQGYQSKARYNEGYVYGCRVHDMMLDLICSLSKEKNFVTLVDSYEQVELPLSHARRLAMQSMSIKEINRLQLPNMGMEQVRSFLANRCYGISLAFSDFRVLRILALEYCQGKINLSHFRSLYHLRYLGLVNAEITELPKEVGDLMFLQTLDLRETSILELPESVGLLTQLLCLYVDHRTWAPVDLIGKLTSLQELCIRPAYAYDRFYDDKANGMRQFVKALGRLGELRVLQTQIDILDDSMEKDLLESLDNLQKIRSLEILGASRGLNVEWTRTGFISPRHLQRLYLECLEFSGLPAWINSSLLPNLSYLNMTMEVVQEQDMETLGMFPILCYLKLYSRCTKLVSFKHTSNAGYFQKLKSFKIVGSSVRFDLSGCDIESSFMPSLETFETDVHVRFLKDANMLGFDKLGLENLPSSLKRIIVVICCRDASDAEVEEAQAALEHATDSHANSPKLTIMRYGVQIKRPL</aaseq>

Gene Sequence

<dnaseqindica>1..836#1791..3822#ATGGAGCTGGTTACAGGGGTGCTGGGCAGTTTGCTCCCCAAGCTGGGCGAGCTGCTCAAAGACGAGTATGACCTGCAGAGGGGCACGAGAGAGAAGATCAAGTCTCTGTCGCGGGAGCTCGAGAGCGTGCACGCTGTCCTCCGTATTGTCGGCGAGGTGCCATCGGAGCAGCTCGACGAGCTGGTCAAGCTCTGGGCACGTGATGTGAGGGAGCTGTCCTATGACATGGAGGACATCGTCGACACCTTCTTGGTGCGTTTCAATGACGGTCATGAGCCCGATGACCCACGGGTGCTCAGGCGCCTCCGCAAGAAGATGAGCAAACTGTTCAAGAAAGCCAAGGATCGCCGCGAGATTGCTGGCGCGATACGAAGAATCAATGAGAAGCTCCAGGAGGTGGCAACCAGGCGTGCCAGGTACAGAGTCGACAGCATTGTCACAAAGCCTGCAGGCCCAGTGAGCATCGATCCTCGCATTCAGGCTCTGTACAAAAGGTCAACAGAGCTTATTGGCGTTGACGGACCAATGGACAAGATCATAAACATGCTATCACCTAGGAATGATATTCATCTGTCTGATAAGAAGAAGATTATCTCAATTGTGGGATTTGGAGGACTAGGAAAGACCACCCTTGCCAAAGCAGTCTATGACAAGCTTAAACCAGATTTCGATTGTGGGGCTTTTGTTCCGGTCGGTCGGAATCCTGACATGAAAAAAGTTTTAAGGGACATTCTGATTGATCTTAACAAGCAAAACTATATGCATTCAAATACAACGACGACATTGGATGAAAGGCAGCTCATCAACGGAATCAAGGATCTAGTCGAGAAAAAGAGGTGCTGATATATAATTATATATTCAGTTATTCAATCAGGTCGCAAATATTGGTGTGATTGTTAATTTTGGTAGCTTTAGTATGCTTACTTTATGCCTAACTAGTGTTATGTACACTTGTAATAATTCTACTCCCTCCAAGTATGGTTTCCAAAATTCCACAGGTAACCTTGCAAAAATAAAATAAAATAAAAATCCATAGATGACCTTTTGCCAAAAATATGTTATGCTCCTTCCCTCCGAATTTACAATTTATACTTAATCTTGCACAAAGACCAAGGAGGTATTGAAATTTGAAATGAGGATAACTACGTTTATTATTTCTAAATGCTAGTCTAAATGGATGTGCCTATAAAACACAAAGTAAGACTGTTTGAGTATGGAAGGAATAACACACCTAAAACACCTTGGAATATGAAATAAACCCTCTAAAACAAGGTTGAAAGGATACACCACATTCACTTTATAAGGGTTAGCTAGAAATTATCACATTGAGAGATGAAAAACTACCACACCGGTAATATCTACGCACAACAAAAAAAAAAGATTGAAGTTTTGTTTTACTAGGAATTCGTCATCTACTCAATTTTTTCATTGCATTTGCTGGTGCATGCATGTATTATATTTGTAATTTTATTTAAAACAGTGCCTTAACAGTCTGTGTAAACATCTTTATCTGTAACTTATTTGATACACTTTTTTTGCGGGGAAATATATTTGATACACTAATATAACATCCAATTTTGGATCTGTTTGTACTGTTTATTCTGGTTGTTAAATTTAAAACACAAGTATTGCGTACAATTGCCAGATTAGGACAATGACTGATTCTATGGGACAAATGTAATACTAATCATTACTTCTTGTTCTATCATTTAAGGGGAACTCTCTCCTGTTCTACCTGTTGATGGTTGACATGCTTCTTGCTTGTTAATGTTTATCCTTCCGATGTACAGGAGCATTGTTATTATTGATGACATATGGGATAAGAAATCATGGGAATTAATCAGATGTGCACTGCAAGATAGTAATTATGGAAGTAGAGTAGTCGTAACTACTCGTATTTCTGAAGTTGCCACACATGCGGGTTGTGTTTACAATATGGAGCCACTTTCTCGTGATGACTCTGAAAAATTGTTGTACACAAGAATAGCTAGTGCTGAAGGCAAATGTCTTACTAGACCATCAGCCGTGGCATGTGAGAAAATTTTGAACAAATGTGACGGTGTGCCATTAGCTATAATAACAATAGCTAGTCTGTTGGCGAACAAACCCGAAGAGGATTGGTCTGAGGTGTACAATTCCATTGGTTTTGGGCATGGAGGTAATAACGATGTAGAGAATACTAGAAAGATATTGTCTTTTAGCTACTATGATCTGCCTTCACATCTAAAGGCTTGCCTATTGTATCTAAGCATATTTTCTGAAGATGTTGAGATCGATAAAAATATTTTGATATGGAAATGGATAGCTGAAGGTTTTGTTCAAGACGAACAAGCAGCAGGGGTAGGGTTATTTGAGCTTGGAGAGGGTTGTTTCAACGAGCTGATAAACAGAAACATGATCATGCCAGTGGAGGTACAATATCAAGGGTATCAATCTAAGGCACGCTATAATGAAGGGTATGTATATGGTTGCCGTGTCCACGATATGATGCTTGATTTGATCTGTTCATTGTCGAAGGAAAAAAATTTTGTTACCCTGGTGGACAGCTATGAGCAAGTGGAACTTCCGCTGAGCCATGCTCGCAGGTTAGCCATGCAGAGTATGAGTATTAAAGAGATAAACCGTCTTCAGCTGCCTAATATGGGCATGGAGCAAGTGAGGTCCTTTTTGGCTAATCGTTGTTATGGTATTAGTTTGGCATTCTCAGACTTTCGAGTGTTACGTATATTAGCTCTAGAATATTGTCAGGGCAAAATTAATTTGTCGCATTTCAGGAGTTTATATCACCTGAGGTACCTGGGGCTAGTCAATGCGGAAATTACAGAGCTCCCCAAGGAAGTGGGAGATCTGATGTTTCTCCAGACATTGGATCTACGAGAAACTTCTATACTGGAGCTGCCAGAATCTGTGGGTCTGCTGACACAACTGTTATGCCTATATGTTGATCATCGTACATGGGCGCCAGTTGATCTGATCGGGAAGCTGACGTCCCTGCAAGAGCTGTGCATAAGGCCTGCTTATGCGTACGACAGGTTCTACGATGACAAGGCCAATGGTATGAGACAGTTTGTGAAGGCGTTGGGCAGGCTGGGAGAATTGAGGGTGCTCCAGACTCAGATTGATATATTGGATGATAGCATGGAGAAAGATTTGCTAGAGTCTCTAGACAATCTGCAGAAGATACGGTCCTTGGAAATTTTGGGGGCATCACGAGGGTTGAACGTCGAATGGACTAGAACAGGATTCATTTCCCCTAGGCATCTCCAGCGCCTGTATTTGGAATGCCTTGAGTTTTCTGGACTGCCTGCATGGATTAACTCGTCACTTCTTCCAAACCTCTCCTATCTAAATATGACAATGGAGGTTGTGCAAGAGCAGGACATGGAAACCCTTGGGATGTTTCCTATACTCTGTTACCTAAAATTATATTCGCGTTGTACAAAGCTAGTAAGCTTTAAGCATACAAGCAATGCAGGCTACTTCCAGAAGTTGAAATCCTTCAAGATTGTTGGTTCATCAGTCAGGTTTGATCTGAGTGGCTGCGACATAGAATCTTCTTTCATGCCAAGCCTTGAAACCTTTGAGACTGATGTCCATGTGCGCTTCCTAAAAGATGCGAACATGCTTGGTTTCGACAAGCTTGGCTTGGAGAACCTCCCAAGTTCGCTAAAGAGAATCATTGTTGTAATCTGCTGTCGAGATGCCAGTGATGCAGAGGTTGAGGAAGCACAGGCGGCATTGGAGCATGCAACTGACAGCCATGCCAACAGTCCTAAACTTACAATTATGAGATATGGAGTACAAATTAAACGGCCCTTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028065