BGIOSGA028075

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Revision as of 07:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028075| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028075, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028075

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028075, complete gene.

LocusTag

OSJNBA0054L03.25

Ensembl Transcript ID

BGIOSGA028075-TA

Ensembl Protein ID

BGIOSGA028075-PA

Length

4153

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4580167..4584319

Sequence Coding Region

4580167..4580886,4583258..4583731,4584296..4584319

Genome Context

<gbrowseImage1> name=IndicaChromosome08:4580167..4584319 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:4580167..4584319 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCACCACCATCGGTCACCGTCATCGAGGACGGCCGCGTCGCCGTGCCGCCTCCGCCGCCGCCAGCTTCCGGCGACGCCGCGCCGCCTCCTCAAACGACGCTGTTCAAGCTGACCGCGCTCGACGCGCAGTGGATCCCGCTCCCGCTCATCCAGCGGGTGCTCGTGTTCGACGGCGGCGAGGGGCGCATACCGCCGTTCGAGGACGTCGTCGCCGCCCTCCGCGCGTCCCTGGCGGAGACGGTGGCGCGGCTACTGCCCCTCGCGGGTAGGATCGTCCACCTGCCGGAGACGGGGGAGGCGGCGATCGACTGCTCCGGGAGCGGCGTGGCCGGCGGCGGCGTCAGGTTCGTCGTCGCGGAGTGCGGCGGCGCCGACGCGGCGCGCGTCGCCCGGGACGCCGACCACGACGTGGCGCTGCTGGAGCAGCTCGCGCCGGTGCTCGACGCCGACGCGCTCCCGGCGGAGACGATGGCCGCGCAGGTGACCAGGCTGGGCGGCGGCGGCGGCGTGGCGGTCGGCGTGGCGCTGCACCACGCCGTGGTGGACGGCCGCTCGGTCTGGAGGTTCATCGAGGCCTGGGCGGCGTGCTGCCGCGGCGACGACGCGTGGAGCGCCGCGCCGGCGCCGGCGTTCGACCGCGCCGCCGTCGCGCTCCCTGACGGCGAGGAGCTCGCCAGGGACGTGCTCCGGAAGTACGTCCCAAACCTGCCAGTGGCAACGGTACCCAAGTTCCTCGTCAAGGGCCGCCTGCAGCTCTCCCGCCGGACGTTCACCGTCGCCGCCGCGCAAATGCTCCGGCTGAAGCAGCGCATCGTCGTCGCCGGCGCCGGCGGCCTCACGCCGCCGTCCGGCTTCGTGGCGCTCGCGGCGCTGGCGTGGGTGTCGTTCGTCCGGAGCAAGCACGCGGCGGGCGCCATCGCCGCCGGCGACGAGGTGTACCTCTTCTTCTTCATCGACTGCCGCGGCCGCCGCGCCGCGTTCGACCCGCCGGTGGGGGAGGGCTTCTTCGGCACGTGCATCTCCGGCTGCCTCGCCACGGCCACCGCGCGGGACCTGCTCGGCGGCGGCGACGGCGGGCTGGTCGCCGCCGCCAGGGCCGTGCAGGAGGAGGTGCGGCGAGCGGCGGAGGACCCGCTCGCCGGCTGGGAGTGGATGTCGCTGGTGTGGCTGATCGCGCTGAGCCGGCTGTCAAAAATTTTGGAGTGCTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPPSVTVIEDGRVAVPPPPPPASGDAAPPPQTTLFKLTALDAQWIPLPLIQRVLVFDGGEGRIPPFEDVVAALRASLAETVARLLPLAGRIVHLPETGEAAIDCSGSGVAGGGVRFVVAECGGADAARVARDADHDVALLEQLAPVLDADALPAETMAAQVTRLGGGGGVAVGVALHHAVVDGRSVWRFIEAWAACCRGDDAWSAAPAPAFDRAAVALPDGEELARDVLRKYVPNLPVATVPKFLVKGRLQLSRRTFTVAAAQMLRLKQRIVVAGAGGLTPPSGFVALAALAWVSFVRSKHAAGAIAAGDEVYLFFFIDCRGRRAAFDPPVGEGFFGTCISGCLATATARDLLGGGDGGLVAAARAVQEEVRRAAEDPLAGWEWMSLVWLIALSRLSKILECF</aaseq>

Gene Sequence

<dnaseqindica>1..720#3092..3565#4130..4153#ATGGCGCCACCACCATCGGTCACCGTCATCGAGGACGGCCGCGTCGCCGTGCCGCCTCCGCCGCCGCCAGCTTCCGGCGACGCCGCGCCGCCTCCTCAAACGACGCTGTTCAAGCTGACCGCGCTCGACGCGCAGTGGATCCCGCTCCCGCTCATCCAGCGGGTGCTCGTGTTCGACGGCGGCGAGGGGCGCATACCGCCGTTCGAGGACGTCGTCGCCGCCCTCCGCGCGTCCCTGGCGGAGACGGTGGCGCGGCTACTGCCCCTCGCGGGTAGGATCGTCCACCTGCCGGAGACGGGGGAGGCGGCGATCGACTGCTCCGGGAGCGGCGTGGCCGGCGGCGGCGTCAGGTTCGTCGTCGCGGAGTGCGGCGGCGCCGACGCGGCGCGCGTCGCCCGGGACGCCGACCACGACGTGGCGCTGCTGGAGCAGCTCGCGCCGGTGCTCGACGCCGACGCGCTCCCGGCGGAGACGATGGCCGCGCAGGTGACCAGGCTGGGCGGCGGCGGCGGCGTGGCGGTCGGCGTGGCGCTGCACCACGCCGTGGTGGACGGCCGCTCGGTCTGGAGGTTCATCGAGGCCTGGGCGGCGTGCTGCCGCGGCGACGACGCGTGGAGCGCCGCGCCGGCGCCGGCGTTCGACCGCGCCGCCGTCGCGCTCCCTGACGGCGAGGAGCTCGCCAGGGACGTGCTCCGGAAGTACGTCCCAAACCTGCCAGTGGTAAGCACGCAAATTCACAGGATTTCTTTGAATTCCATTGTTTTTTTTAAAAAAATTTACATTTCAAAAGAATATGTTCAAATATTTTTAAAAAGAAATAAATGTTACTCCCTCCGTCCCATAATGTAAGGGATTTTGAGTTTTTGTTTGTATTGTTTGACCACTCGTCTTATTCAAATAATTTGTGCAAATATAAAAAATGAAAAATTGTGCTTAAAATATTTTGAATAATAAAGTAAAAAAAATAACAATTCTAAAATTTTTTAAATAAGACGGGTGGTTAAACAGAACGAGCAAAAACTTAACATCTCTTCTTATTCTCTAGTATAGGGACGGAGGGAGTATTTTTTCAACCGTGCGATCGATCAGATTAGTGGGCCATGAGGTACGGCCTTTCACTGTCCAACTTTTAATGTCTTCATTGCAGTGCATGCCCTGCTACTGCTAGTTGTGTGGTTCTATCCAAATTTGAGGCTCCTGTCAGATTTGAGGGAATGTCTTCCCGGCAGATCAAGAAAACAAACACAAAATTTTACCGTAACTTACCCCCCGATAACTTCAAAACAGTAATTAACAGCCATTCCATTTGGAATTTATAGCTGGAGTTAAATGTAAACTCATTATATTTATACAGTGTAAATTTCACAAGAACCAGACCTACAACATAAGCTAAAGAATCATATAACCTCAAAACAATATAGTACCAAACCAACCCAAAAAAAGTCCAAATTTTTCCTCTAAATTATTGCGGTCGTCCGATTTATCATACTCATTTTAAATACTAAATATTTTACGCCTTAAACTTTTTAAACCGGACCGATAATTAACCTCCTTAACCTCCCATAAAGCAGTATCAGTCTTACGCGACACACACGTACAACAGTTTAGCCACATGTCCATCTAGTAAACAGTTTGGAAAAATATTTTTTCAGAAAATATAATAGTGGCCCCACATGTCATATTCTTATATCTTCTTCTTCCTCGCTCTCTCATAGTCCCGTGCCGTCGTCGCCCCCGCCCCCCGTTGATCTCTCCAGCTCTCCCTGCCACCACCCTCCACGAGCTTGCTAGCTCCACTAGTGTGGCTGCAGCTCGTTGCATCCATGTGCCATAGCACAAGCCAATCAAGCTCCTCTCAACTGAAGAGGAACACACCCATGCGACCTTCCGAGCCATTCCCCCTTCCCTCTCACTGAGATCGATGGGTGAGATGATGCATGATTCGGCAGGGTTGCTGCCTTTCTGGGGATGACGCCACCGCTATCGCCTACACATCAAACCTTTCTTCCTCTGCCGTCTCAGGGAGGCCATCGCCATCTTCCTTCGCCTCCTCACTGCTCCTCCTGTTGTGGGGAGGAGGGAGGGAGAGAGTGGGAGATGGAAGGAAGGAGACGAGAGGAGAAGAAGATGGAGCTCGCTGATTTTTTTTCTATCTTTAATTTCTAGCTTACTAGACTGCAGTCACGTAATATTAAAATCACTCCGGATTAAGTTAGGGGGGGTTAAGCATCTAGTTTAAAGAGTTCGAGATACAAAATATCTGGTATTTGTTGAATGGGTAAATCGAACGATCGCAATAGTCCAAAAAGGTAATTCGGATTTTTTTCCTACTAATTTATAGTCGCTTTTTTAAAAAAAAATAATTGGAGTTACAATCTAACATCACCATATTTACACTGTAAATTGCAGAACTTCGTAGAACCACACGTAGTTAGGACATAATCGGATAGCTGTTTACGTTTTACAGTCATTTTATGCTGGGGATAAAGCATTTTTAGCATAGTAACAAATCAAACATTTTTAACTTTGATTATTAATAGAAAAAAAAAATCAATCATGTAAGTAAACAATCATAATATGTAACTTTTTTATTTAAAACATTTTACTTTTATAAATATTATTGGTCAAAGTAGCATCTCGAAAACAGTGTGAGGATAAAAAATGCTTATATTTTGGAACGAAGAGAGTATTAGTTTTTTTTTGAAAAATGGACTAATATGATTTTTTAAAACAACTTTCATATAAAAATTTTTACAAAAAACACACAATTTAATAGTTTGAAAACGTACGTGCGGAAAACGATAAATATGAGTTAGGAAAGTGAGGTAATGACGTGGCATCCTAATGACTATACTAACTCAATGGAATGGGCTATGGTGTTATGTTTTGGCCTTGGTTCACACGTGTTACACAAGTCACTCATCACATAAAAGTTCTCTAAACTTTTGTACTATTAGGGCAATTTATACCTTTTAAGTTCGAGTAATTCTATACAATTTACTCAAATAACTTTTATAAATATAGTGTTTTTTAAAAAAAATGCAAAATAAGTTCATAAATTTGGCTTATTCGCGCCATTTCCGATGAGCAGGCAACGGTACCCAAGTTCCTCGTCAAGGGCCGCCTGCAGCTCTCCCGCCGGACGTTCACCGTCGCCGCCGCGCAAATGCTCCGGCTGAAGCAGCGCATCGTCGTCGCCGGCGCCGGCGGCCTCACGCCGCCGTCCGGCTTCGTGGCGCTCGCGGCGCTGGCGTGGGTGTCGTTCGTCCGGAGCAAGCACGCGGCGGGCGCCATCGCCGCCGGCGACGAGGTGTACCTCTTCTTCTTCATCGACTGCCGCGGCCGCCGCGCCGCGTTCGACCCGCCGGTGGGGGAGGGCTTCTTCGGCACGTGCATCTCCGGCTGCCTCGCCACGGCCACCGCGCGGGACCTGCTCGGCGGCGGCGACGGCGGGCTGGTCGCCGCCGCCAGGGCCGTGCAGGAGGAGGTGCGGCGAGCGGCGGAGGACCCGCTCGCCGGCTGGGAGTGGATGTCGCTGGTGTGGCTGATCGCGCTGAGCCGGCTGGTGAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGGTGTCGATGAAGCCGGAGCACATGGACAAGTTCAAGTCGGATTTTGAGAGCTACTTAGAATGATTATTTGACTAAAAAAATACCTGTGCGTTGTACGGGTGAAGTCTATTTTAATCTTATTATTATTATATGGTTTAATCTTATTATTATTATATGGTTTAGTTAAGATAAAATTTAATGTGAGAGTTCGCTTGAAAATATATATTTTTAGAAAATTATGGGTTGTAGTTAGGAATCCAATCACCTTAAGTTAGCATGCGAGTTTTTTTAAACATATTTTTTTTTGATTCCTTCTGTATTAAAAAAGTGAATTATCTTAAAAACCGTCTCAAATACGGATATGTATTTTCAAAAGCAAACGAACTTAAAAACCGACTCATACACGGATGACGTATAAAAATACCAACAAAAACATTTTCCATTTTTACTATAGTAGAGATCGAAGAAGATGAAAATTCCAATTGGAAACCATCGATCGTACTACGTGTTTCTTGTTTGTAGTCAAAAATTTTGGAGTGCTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028075