BGIOSGA028161

From RiceWiki
Revision as of 07:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028161| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028161, complete gene.| tag = OS08G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028161

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028161, complete gene.

LocusTag

OS08G0200500

Ensembl Transcript ID

BGIOSGA028161-TA

Ensembl Protein ID

BGIOSGA028161-PA

Length

1582

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6215003..6216584

Sequence Coding Region

6215003..6215060,6215161..6215267,6215364..6215574,6215655..6215892,6215981..6216131
,6216240..6216584

Genome Context

<gbrowseImage1> name=IndicaChromosome08:6215003..6216584 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:6215003..6216584 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTGCTGCTTTATGTTTGGGAATGATACAAAACAAACTAGTGAAGGTGAACAAGGAGAAAAAGCGGTCAGGATTTTTTCTTACAATGAGCTGAGAAGAGCTACACATGATTTTAGTGGGGCGAACAAGATTGGTGAGGGCGGCTTCGGTTCTGTGTTCAGGGGAAGGCTCAGAGATGGGACAATAGTTGCAGTAAAGGTGCTCTCTGCTACTTCAAGGCAAGGCGTCCGTGAGTTCATTAATGAACTGACAGCAATTTCCGATGTGATGCATGAAAACCTAATTACGTTAGTCGGCTGCTGTGCTGAAGGGTCTCATAGGATCCTTGTATACAATTATCTTGAGAACAACAGCCTTCAACATACACTACTAGGGTCAGGCCGTAGCAACATCCAATTCAATTGGAGAGCTCGTGCCAAAATCACTGTAGGTGTTGCCCGTGGGCTTGCATTTCTTCACGAAGAAGTTCGTCCTCACATAATACACCGGGACATAAAGGCAAGCAATATTCTTCTCGACAAGGATATCACCCCCAAAATATCTGATTTTGGGTTGGCCAGGCTCCTCCCACCAAATGCGACTCATGTGAGCACCCGAGTTGCAGGAACAATAGGGTACCTAGCTCCTGAATATGCACTCAGAGGACAAGTGACTAAGAAGTCAGATATCTACAGTTTCGGTGTTTTGATCTTGGAAATTGTCAGCGGCAGATGCAACTATAATTCTAGGTTGCCTTATGAAGAACAATTTCTGCTTGAGAGGACATGGACATGTTATGAGCAAGGGCATTTAGAGGAGATCATAGATGCAGATATAGAAGATGATGTGGATGTCGAGGAGGCATGCCGGTTCTTGAAGGTTGGACTATTATGCACTCAAGATGCGATGAAACTCCGTCCCAACATGATCAACATCGTCCAGATGCTGACCGGAGAGAAGGATGTCAACACAGAAAGGATCACCAAGCCCTCTGTTGTTGGTGACCTGGGAGACCTGAGAGGTAGCAGCCAGCAGAGACCAATTGATCCACAGTCTCTCCTGATGAGATCCTTTGCCACCACTGACCCATCCACATCATCAGACACGACTACACGATCATCGCTATGA</cdnaseq>

Protein Sequence

<aaseq>MACCFMFGNDTKQTSEGEQGEKAVRIFSYNELRRATHDFSGANKIGEGGFGSVFRGRLRDGTIVAVKVLSATSRQGVREFINELTAISDVMHENLITLVGCCAEGSHRILVYNYLENNSLQHTLLGSGRSNIQFNWRARAKITVGVARGLAFLHEEVRPHIIHRDIKASNILLDKDITPKISDFGLARLLPPNATHVSTRVAGTIGYLAPEYALRGQVTKKSDIYSFGVLILEIVSGRCNYNSRLPYEEQFLLERTWTCYEQGHLEEIIDADIEDDVDVEEACRFLKVGLLCTQDAMKLRPNMINIVQMLTGEKDVNTERITKPSVVGDLGDLRGSSQQRPIDPQSLLMRSFATTDPSTSSDTTTRSSL</aaseq>

Gene Sequence

<dnaseqindica>1..58#159..265#362..572#653..890#979..1129#1238..1582#ATGGCTTGCTGCTTTATGTTTGGGAATGATACAAAACAAACTAGTGAAGGTGAACAAGGTGGGCATGTCTTCATTTAGTTCTATAGTCTCTTCTGTATACAGAATGCTCCTCATTCTGATACATTTGTTGACTTGCAACTTGTTTCTGGCGGTTTCAGGAGAAAAAGCGGTCAGGATTTTTTCTTACAATGAGCTGAGAAGAGCTACACATGATTTTAGTGGGGCGAACAAGATTGGTGAGGGCGGCTTCGGTTCTGTGTTCAGGGTAATGTACCAAAGCCTTTGGTCGCTTCAACTAAGTCTAATATCCATTCTATATTACATCGACCTCACTTGCTTAAAATTCATTTTGGTTGATCAGGGAAGGCTCAGAGATGGGACAATAGTTGCAGTAAAGGTGCTCTCTGCTACTTCAAGGCAAGGCGTCCGTGAGTTCATTAATGAACTGACAGCAATTTCCGATGTGATGCATGAAAACCTAATTACGTTAGTCGGCTGCTGTGCTGAAGGGTCTCATAGGATCCTTGTATACAATTATCTTGAGAACAACAGCCTTCAACATACACTACTAGGTAACATACTGGTCTACCTAGTCTGTCCTTGCTTAATCAAGACACTCTTTAACAGTAACCTCACTCACATGGCAATGCAGGGTCAGGCCGTAGCAACATCCAATTCAATTGGAGAGCTCGTGCCAAAATCACTGTAGGTGTTGCCCGTGGGCTTGCATTTCTTCACGAAGAAGTTCGTCCTCACATAATACACCGGGACATAAAGGCAAGCAATATTCTTCTCGACAAGGATATCACCCCCAAAATATCTGATTTTGGGTTGGCCAGGCTCCTCCCACCAAATGCGACTCATGTGAGCACCCGAGTTGCAGGAACAATGTAAGTTTAACTGTGTTTAGGGGGTCTTTTGGAAATTCCTGCATAGATATTCCCCATGTTGTCTTACTCTGTCCTTTTATTTTATCAGAGGGTACCTAGCTCCTGAATATGCACTCAGAGGACAAGTGACTAAGAAGTCAGATATCTACAGTTTCGGTGTTTTGATCTTGGAAATTGTCAGCGGCAGATGCAACTATAATTCTAGGTTGCCTTATGAAGAACAATTTCTGCTTGAGAGGGTAAGCTCTACCATAATACCATACTAAAGAATACTGACAATTATTATGTTTATGCATTGACGTCCGGACTCCAGACTAACCTGTAAAGGTTTGCCGGTGCTCTTGCAGACATGGACATGTTATGAGCAAGGGCATTTAGAGGAGATCATAGATGCAGATATAGAAGATGATGTGGATGTCGAGGAGGCATGCCGGTTCTTGAAGGTTGGACTATTATGCACTCAAGATGCGATGAAACTCCGTCCCAACATGATCAACATCGTCCAGATGCTGACCGGAGAGAAGGATGTCAACACAGAAAGGATCACCAAGCCCTCTGTTGTTGGTGACCTGGGAGACCTGAGAGGTAGCAGCCAGCAGAGACCAATTGATCCACAGTCTCTCCTGATGAGATCCTTTGCCACCACTGACCCATCCACATCATCAGACACGACTACACGATCATCGCTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028161