BGIOSGA028226

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Revision as of 07:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028226| Description = BGIOSGA028226| Definition = Oryza sativa Indica Group BGIOSGA028226, complete gene.| tag = | tid = BGIOSGA028226-TA|...")
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Gene Name

BGIOSGA028226

Description

BGIOSGA028226

Definition

Oryza sativa Indica Group BGIOSGA028226, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA028226-TA

Ensembl Protein ID

BGIOSGA028226-PA

Length

1092

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:8356926..8358017

Sequence Coding Region

8356926..8358017

Genome Context

<gbrowseImage1> name=IndicaChromosome08:8356926..8358017 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:8356926..8358017 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTCCAAGAAGAAGAATACAACGGCGTCGAGGCACACCACGGAGTCAGAGGAAGGCACGCACTCGTTCGAGATCGTCGGGTATAGCCTCCAGAAGGGCATCGGCGTGGACGAGTTCATCGAATCGGCCACCTTCGCCGTCGGCGGCTACGACTGGTGCATCCGCTTCTACCCCCACGGCAAGGGCGATGGTGCCAAGGACTACATCTCGGTGTATCTCGAGCTCCTGACCAAGAACTGCGCCGTCCGGGCGGCCTACGACCTGAGATTGGTTAATCTTGCCACCGGGTTGCCAAAGAGTGTCTACTCTGAAACAACTCACAGGATGTTCAATTCTGATGACAGTAGCAAATTTGCTCCGCATTACGCGACTTTCATGCACAGAAGTCAACTGGAGATGGAAGCGTCAGGCTACATCAAGGACGATCGCCTCACCATCGAATGCTTTCTTACCGTCATCGTCAAGGAATCGATGGCGTCTAATACCGTGAAGGCCCATGAATTAATCAATGTGCCGCCGTCAGATTTATCGGAAAATTTTGGCGAATTGTTGGAGAAGGGGGAAGGGTCGGATGTGACTTTCGTTGTTGGAGGAGAGAAAATCGCCGCTCACAAGATCATCCTTGCAGCACGGTCATCCGTCTTCAANGCGGAGCTCTATGGGCAGATGAAGGAGAAGAGGGCCCGGCGGGTAACCGTGGAAGACATGCAACCTGATGTTTTCAGGGGCCTCCTGCATTTCATCTACACCGATTCGTTGCCGGACATGGATGATCTCAGTGACGACGACTACTATGAGATGATCAGGCTTTTGCTTGTGGCTGCTGATAGGTATGCCATGGACAGGATGAAGTTGCAGTGCGAAAGCATCCTTGGCGAGCATCTTGATGTGCAGACCGTCGCAACTACATTGGCTTTAGCTGATCAGCATAACTGCAATGGCCTTAAAGATGTTTGCATTGAATTTATCACCAATCAAAACAAGATGGATGATGTGGTGGCAACTGAAGGCTATGCTGATCTCAAGAGAACTTGCCCTTCTGTCTTAGTTGATGTATTCGAGAAGGCAAGTAAGTTCCGTAGAATTTAA</cdnaseq>

Protein Sequence

<aaseq>MVSKKKNTTASRHTTESEEGTHSFEIVGYSLQKGIGVDEFIESATFAVGGYDWCIRFYPHGKGDGAKDYISVYLELLTKNCAVRAAYDLRLVNLATGLPKSVYSETTHRMFNSDDSSKFAPHYATFMHRSQLEMEASGYIKDDRLTIECFLTVIVKESMASNTVKAHELINVPPSDLSENFGELLEKGEGSDVTFVVGGEKIAAHKIILAARSSVFXAELYGQMKEKRARRVTVEDMQPDVFRGLLHFIYTDSLPDMDDLSDDDYYEMIRLLLVAADRYAMDRMKLQCESILGEHLDVQTVATTLALADQHNCNGLKDVCIEFITNQNKMDDVVATEGYADLKRTCPSVLVDVFEKASKFRRI</aaseq>

Gene Sequence

<dnaseqindica>1..1092#ATGGTGTCCAAGAAGAAGAATACAACGGCGTCGAGGCACACCACGGAGTCAGAGGAAGGCACGCACTCGTTCGAGATCGTCGGGTATAGCCTCCAGAAGGGCATCGGCGTGGACGAGTTCATCGAATCGGCCACCTTCGCCGTCGGCGGCTACGACTGGTGCATCCGCTTCTACCCCCACGGCAAGGGCGATGGTGCCAAGGACTACATCTCGGTGTATCTCGAGCTCCTGACCAAGAACTGCGCCGTCCGGGCGGCCTACGACCTGAGATTGGTTAATCTTGCCACCGGGTTGCCAAAGAGTGTCTACTCTGAAACAACTCACAGGATGTTCAATTCTGATGACAGTAGCAAATTTGCTCCGCATTACGCGACTTTCATGCACAGAAGTCAACTGGAGATGGAAGCGTCAGGCTACATCAAGGACGATCGCCTCACCATCGAATGCTTTCTTACCGTCATCGTCAAGGAATCGATGGCGTCTAATACCGTGAAGGCCCATGAATTAATCAATGTGCCGCCGTCAGATTTATCGGAAAATTTTGGCGAATTGTTGGAGAAGGGGGAAGGGTCGGATGTGACTTTCGTTGTTGGAGGAGAGAAAATCGCCGCTCACAAGATCATCCTTGCAGCACGGTCATCCGTCTTCAANGCGGAGCTCTATGGGCAGATGAAGGAGAAGAGGGCCCGGCGGGTAACCGTGGAAGACATGCAACCTGATGTTTTCAGGGGCCTCCTGCATTTCATCTACACCGATTCGTTGCCGGACATGGATGATCTCAGTGACGACGACTACTATGAGATGATCAGGCTTTTGCTTGTGGCTGCTGATAGGTATGCCATGGACAGGATGAAGTTGCAGTGCGAAAGCATCCTTGGCGAGCATCTTGATGTGCAGACCGTCGCAACTACATTGGCTTTAGCTGATCAGCATAACTGCAATGGCCTTAAAGATGTTTGCATTGAATTTATCACCAATCAAAACAAGATGGATGATGTGGTGGCAACTGAAGGCTATGCTGATCTCAAGAGAACTTGCCCTTCTGTCTTAGTTGATGTATTCGAGAAGGCAAGTAAGTTCCGTAGAATTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028226