BGIOSGA028248

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Revision as of 07:55, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028248| Description = BGIOSGA028248| Definition = Oryza sativa Indica Group BGIOSGA028248, complete gene.| tag = | tid = BGIOSGA028248-TA|...")
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Gene Name

BGIOSGA028248

Description

BGIOSGA028248

Definition

Oryza sativa Indica Group BGIOSGA028248, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA028248-TA

Ensembl Protein ID

BGIOSGA028248-PA

Length

4356

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9051876..9056231

Sequence Coding Region

9051876..9052022,9052254..9052344,9052671..9052719,9052905..9053022,9053254..9053344
,9053811..9053900,9054062..9054150,9054382..9054472,9054940..9055029
,9055194..9055297,9056091..9056231

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9051876..9056231 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9051876..9056231 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGTGATAATGATGCTGAAAATTACAGGAAAATTGCTGACAAAGTTGGTCAAGCAGGATATTATGTCGCTGTACCTGATTTCTTCCACGGAGATCCTTACACACTAGACCTGAANCTTACGGAATGGTTCAGCAAACATTCTCCGGTAAAAGCAGCTGAAGATGCTAAAGCAATCTTTTCTGATCTAAGAAAGAAAGGGATATCTGTTATTGGAGTTGGAGGTTACTGTTGGGGTGCCGGCACTGATGCGTTGTTATCAGTGCCGCTTCTTGCTGTGTGGAGGGCGAAAATTGCTGACAAAGTTGGTCAAGCAGGATATTATGTCGCTGTACCTGATTTCTTCCACGGAGATCCTTACACACTAGACCTGAACCTTACGGAATGGTTCAGCAAACATTCTCCGGTAAAAGCAGCTGAAGATGCTAAAGCAATCTTTTCTGATCTAAGAAAGAAAGGGATATCTGTTATTGGAGTTGGAGGTTACTGTTGGGGTGGGAAGTTTGCCGTGGAGGTAGCAAAAACCAACGAGGTTGAAGCGATTGTCACCACCCATCCTGGATTGGTGACTGTCGATGACATTAAAGGATATTATGTCGCTGTACCTGATTTCTTCCACGGAGATCCTTACACACTAGACCTGAACCTTACGGAATGGTTCAGCAAACATTCTCCGGTAAAAGCAGCTGAAGATGCTAAAGCAATCTTTTCTGATCTAAGAAAGAAAGGGATATCTGTTATTGGAGTTGGAGGTTACTGTTGGGGTGGGAAGTTTGCCGTGGAGGTAGCAAAAACCAACGAGGTTGAAGCGATTGTCACCACCCATCCTGGATTGGTGACTGTCGATGACATTAAAGAGGTCAAATGCCCCATCGAGATCATTGGAGCTCAGAACGACACACTGACACCACCAAAACTAGTGTACCAGTATGTTCAGGCCTTGCGACATAGAACTGATCGGATTGATTACTTTGCCAAGGTCTTCCAAGGAGTGAACCATGGATTTGCTTGCAGATATAACGCCAGCAACCCATTCGAGGTCAAAAAAGCTGAGCAAGCTCTTGATTTAATGGTCGATTGGTTTCACAAACACTTGAAATAA</cdnaseq>

Protein Sequence

<aaseq>MCDNDAENYRKIADKVGQAGYYVAVPDFFHGDPYTLDLXLTEWFSKHSPVKAAEDAKAIFSDLRKKGISVIGVGGYCWGAGTDALLSVPLLAVWRAKIADKVGQAGYYVAVPDFFHGDPYTLDLNLTEWFSKHSPVKAAEDAKAIFSDLRKKGISVIGVGGYCWGGKFAVEVAKTNEVEAIVTTHPGLVTVDDIKGYYVAVPDFFHGDPYTLDLNLTEWFSKHSPVKAAEDAKAIFSDLRKKGISVIGVGGYCWGGKFAVEVAKTNEVEAIVTTHPGLVTVDDIKEVKCPIEIIGAQNDTLTPPKLVYQYVQALRHRTDRIDYFAKVFQGVNHGFACRYNASNPFEVKKAEQALDLMVDWFHKHLK</aaseq>

Gene Sequence

<dnaseqindica>1..147#379..469#796..844#1030..1147#1379..1469#1936..2025#2187..2275#2507..2597#3065..3154#3319..3422#4216..4356#ATGTGTGATAATGATGCTGAAAATTACAGGAAAATTGCTGACAAAGTTGGTCAAGCAGGATATTATGTCGCTGTACCTGATTTCTTCCACGGAGATCCTTACACACTAGACCTGAANCTTACGGAATGGTTCAGCAAACATTCTCCGGTAATTCGTTTCACCGTCTTATGCAATTTGATTGAATATTCCCTAGAACATTAATTACCTAGTAATCGTGATCGTTCAGATGAAAATTCTCTCCTGCACCTATCAGGATGCACAAATTAAGCCGCAAATTAAGCAAAACTATATCCAAAGTACTTAACCTATACTAGCTAGATGCTAATCAAGGACTCAATAAGTTGATTTTTGACCAGTATATATGAATTGATCCTGCAGGTAAAAGCAGCTGAAGATGCTAAAGCAATCTTTTCTGATCTAAGAAAGAAAGGGATATCTGTTATTGGAGTTGGAGGTTACTGTTGGGGTGGTGAGTGATATTAATCAACATAAAGAAGAAGCACATTAATTTGTGCATTTATAATTATACTACTACATCTATCAGTGGTGTATCTTAAAAATAAAAAGAGCCCAAGTAAACTTATTTGCTATAAAAACTCTGTTTCAATCTGTCTAATATAGAATTTCAATGGATTCAGCAATGAGCCTGGGCAGCCGCCTCGAGGTTGCTAGGCAGTTGATCTGCTATTACTATCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGTACTAATTGTCTGCCAACTAATCATCATCGGTTATTGTCATAGCCGGCACTGATGCGTTGTTATCAGTGCCGCTTCTTGCTGTGTGGAGGGCGTGGGTGTGTATGGTGGGAAAACCCTTATCAGTGATGTGTTTTGTTCGACTAGTACCCATAGGATGATATAATTGTGCTGTTTTGTTGTATTGAGTTAAACTGAATATATCGTGAATTGTGATCCAGTAGTAGATCCGAAAACACCTTAAAAGCATATGTGCGATAATGATGCTGAAAATTACAGGAAAATTGCTGACAAAGTTGGTCAAGCAGGATATTATGTCGCTGTACCTGATTTCTTCCACGGAGATCCTTACACACTAGACCTGAACCTTACGGAATGGTTCAGCAAACATTCTCCGGTAATTCGTTTCACCGTCTTATGCAATTTGATTTTATATTCCCTAGAACATTAATTACCTAGTAATCGTGATCGTTCAGATGAAAATTCTCTCCTGCACCTATCAGGATGCACAAATTAAGCCGCAAATTAAGCAAAACTATATCCAAAGTACTTAACCTATACTAGCTAGATGCTAATCAAGGACTCAATAAGTTGATTTTTGACCAGTATATATGAATTGATCCTGCAGGTAAAAGCAGCTGAAGATGCTAAAGCAATCTTTTCTGATCTAAGAAAGAAAGGGATATCTGTTATTGGAGTTGGAGGTTACTGTTGGGGTGGTGAGTGATATTAATCAACATAAAGAAGAAGCACATTAATTTGTGCATTTATAATTATACTACTACATCTATCAGTGGTGTATCTTAAAAATAAAAAGAGCCCAAGTAAACTTATTTGCTATAAAAACTCTGTTTCAATCTGTCTAATATAGAATTTCAATGGATTCAGCAATGAGCCTGGGCAGCCGCCTGAGGTTGCTAGGCAGTTGATCTGCTATTACTATCTAGTGCCTAGGGCTCGACCAAAAAATGTTTGCAGTCACGAGTAACAACATACTCCCTCCATCCAAAAAAATCCCAATCTAATATTGATGAGATGTTTTCTAGTTCAACGAATCTGGACATGAGTCTGTCCAGATTCGCATTGTAAGGATACACTCTGAACCTTCGTGATCTCCTCTCCACATTGAACAAGCAGAGATCTGATTCATATTAAAGTCTCTCAAAGGCAAGTTTTAACTGGCAGGGAAGTTTGCCGTGGAGGTAGCAAAAACCAACGAGGTTGAAGCGATTGTCACCACCCATCCTGGATTGGTGACTGTCGATGACATTAAAGGTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTGAAAATTACAGGAAAATTGCTGACAAAGTTGGTCAAGCAGGATATTATGTCGCTGTACCTGATTTCTTCCACGGAGATCCTTACACACTAGACCTGAACCTTACGGAATGGTTCAGCAAACATTCTCCGGTAATTCGTTTCACCGTCTTATGCAATTTGATTTTATATTCCCTAGAACATTAATTACCTAATAATCGTGATCGTTCAGATGAAAATTCTCTCCTGCACCTATCAGGATGCACAAATTAAGCCGCAAATTAAGCAAAACTATATCCAAAGTACTTAACCTATACTAGCTAGATGCTAATCAAGGACTCAATAAGTTGATTTTTGACCAGTATATATGAATTGATCCTGCAGGTAAAAGCAGCTGAAGATGCTAAAGCAATCTTTTCTGATCTAAGAAAGAAAGGGATATCTGTTATTGGAGTTGGAGGTTACTGTTGGGGTGGTGAGTGATATTAATCAACATAAAGAAGAAGCACATTAATTTGTGCATTTATAATTATACTACTACATCTATCAGTGGTGTATCTTAAAAATAAAAAGAGCCCAAGTAAACTTATTTGCTATAAAAACTCTGTTTCAATCTGTCTAATATAGAATTTCAATGGATTCAGCAATGAGCCTGGGCAGCCGCCTGAGGTTGCTAGGCAGTTGATCTGCTATTACTATCTAGTGCCTAGGGCTCGACCAAAAAATGTTTGCAGTCACGAGTAACAACATACTCCCTCCATCCCAAAAAAATCCCAATCTAATATTGATGAGATGTTTTCTAGTTCAACGAATCTGGACATGAGTCTGTCCAGATTCGCATTGTAAGGATACACTCTGAACCTTCGTGATCTCCTCTCCACATTGAACAAGCAGAGATCTGATTCATATTAAAGTCTCTCAAAGGCAAGTTTTAACTGGCAGGGAAGTTTGCCGTGGAGGTAGCAAAAACCAACGAGGTTGAAGCGATTGTCACCACCCATCCTGGATTGGTGACTGTCGATGACATTAAAGGTGATATATATATATATATATATATATATATATATATATATATATTCTTTCTTTGTTGCTTTTGCTGAAATATGCATGTATCATCTGATCTAGCTAGGTTGCACAGGAATATATAGCTAGCCATTGTTTTCTTATTCCAAAGTTCGCCGTGACATTTCACGCAGAGGTCAAATGCCCCATCGAGATCATTGGAGCTCAGAACGACACACTGACACCACCAAAACTAGTGTACCAGTATGTTCAGGCCTTGCGACATAGAACTGATCGGGTGAGTTCCCCTATTACCAGTTTCGTTTACAGTTGATATATATAGCAAATGCATCAGCATATATAGGTCCATTTGCCTTGCAATTGTTATTCTTTTTGTTTTTTTTCAGATAAGATAATTTGCACATATACATGAAGCACAGGAATTCAATAGACCGGAAGAGACAGAACACTTAAACTGAAACACTAGGTCTATTTTCTGAAAGGAAATGAAACTGTAGACACACAAGAGAATTTTCCACGGATGATGAGATGATAAAGGATCATGCATGCTGGCTATATTTTTGAGGGAATGCTGGCTCTAATGGCTGGTCAACATCTGGCAAAAGTTAGAGCAGAAGCAGATTATACAATAGCATAAAAACTGAAAGATTACTAGCACATTGTAAACGAGAACCGAGAAATACCATTAGTACATGATTAATTAAATATTAACTATTAAAAAATTAAAACATATTTATTTAAATTTTAAAGAAACTTATATATATAAAGTTTTCTTAAAAAGACACTGTTTTGTGGTTTTAAAAAATATAGTCGCAGTAAACAAGTGAGTTGCATAAGAGAAACGAGGAAAATAACTCACCCAAAATCTAATCCACAAAAGCTAGGCCATCATTTGGGGCACTGTGGCTTTGATCCTATACCTATTCCTTTCTCTCCTTTTTTGCAAGAAGAATATATTTTTCTTTGAAACATTCATCAAATATTTCAATAATAAATCTTTGCAAAGAAATATATTATTCATTAGCAAAAATGAACATTAGAAATAACCTTTTGTTCATTAATTGTTGCAGATTGATTACTTTGCCAAGGTCTTCCAAGGAGTGAACCATGGATTTGCTTGCAGATATAACGCCAGCAACCCATTCGAGGTCAAAAAAGCTGAGCAAGCTCTTGATTTAATGGTCGATTGGTTTCACAAACACTTGAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028248

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028248&oldid=34505"