BGIOSGA028295

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Revision as of 07:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028295| Description = BGIOSGA028295| Definition = Oryza sativa Indica Group BGIOSGA028295, complete gene.| tag = | tid = BGIOSGA028295-TA|...")
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Gene Name

BGIOSGA028295

Description

BGIOSGA028295

Definition

Oryza sativa Indica Group BGIOSGA028295, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA028295-TA

Ensembl Protein ID

BGIOSGA028295-PA

Length

2517

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:9905083..9907599

Sequence Coding Region

9905083..9907599

Genome Context

<gbrowseImage1> name=IndicaChromosome08:9905083..9907599 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:9905083..9907599 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCTCCACCGCCGCGCCGATGCTGCCTTGCCGACGGCGATTGGGGCGCTGCCCTCCCCTGCCATCCCCACCTGCGCCTGTGCAGCTGAGGTCGTCGTGGAAGGACTCCGGCGACGACGCGTGGATCCCGCCGACGCGCGTGAGCCGGTGGCGCAGCTCCTGGCCATCGCCGCCTCCTCGTTGCCACCACGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCAAGGCAGGTGCGGGGGCGGGGGCGGGGGCGCCTCGATCATCCGCAGCTTGAACCGCGCCCTCGCCGCCGTCGCGCGCGACAGCCCCGCGGCCGCCGTGTCCGGCTTCAACCGCATGGCACGATCCAGCGACGGCGCGGTGACTCCCACCTTGCACACCTATGGCATCCTCATCGGCTGCTGCTGCCGCGCGGGCCGTTTGGACCTCGGTTTCGCGGGATTGGGCAATGTTATTAAGAAGGGATATAGAGTGGAACCCATCATCTTTACTCCTCTGCTCAAGAGCCTCTGTGCCGAGAAGAGGACGAGCAACGCAATGAACATAGTGCTCCGCAGAATGACAGAGCTTGGCTGCGCGCCGCATGTCTTCTCCTACAACATTCTTCTCAAGGGACTCTGTCATGAGAGCAGAAGCCAAGAAGCTCTCGAGCTGCTGCACATGATGGCGGATGATGGAGGAGACTGCCCTCCTGATGTGGTGTCGTACAGCACCATCATCGATGGCTTGTTCAAAGAGGGGGATTCGGACAAAGCTTACAGTACATACCATGAAATGCTGGAGCGAGGGATTTTACCAGATGTTGTGACTTACAACACTATTGTCGCTGCCTTGTGCAAGGCTCAAGCTATGGATAAGGGCATGGATGTACTTAATAGGATGGTTAAGAATGGAGTCATGCCCGATTGCATCACATATAATAGTATTGTGCATGGATATTGCTCTTCTGGACAGTCGAAAGAAGCTATTGGAATTTTGGAAAAGATGTGCAGCGATGGTGTTGAACCAGATGCTGTTACTTATACATCTCTAATGGACTATCTCTGCAAGAACGGAAGATGCATAGAAGCTAGAAAGATTCTTGATTCTATGATCAAGAGGGGCCTAAAGCCTAATGTTATTACATACAGTACCTTGCTTCATGGTTATGCTACGAAAGGAGCTCTTGTTGAGATGCGTGATCTCTTGGATTTGATGGTACGAAATGGTATCCAACCTGATCGTCATGTCTTTAGCATACTAATATGTGCATGCACTAAGCATCAAAATGTAGATGTGGCCATGTTTGTATTCAGCAAAATGAGGCAGCAAGGATTAACTCCGGATGTAGTGACCTACGGAACATTGATAGATGGACTTTGTAAGTCAGGCAGAGTAGATGATGCAATGCTTAATTTGGAGCAGATGATTAGTGAAGGTGTAACCCCTAACATCGTTATTTTCAACACACTGATTCATGGTCTCTGTACCAGTGACAAATGGGAGAAGGCTGAGGAGTTAATCTCTGAAATGATTAACAGAGGAATCTGTCCGGACACAATTTCCTTTAATTCAATAATTGATAATCTTTGCAAAGAAGGGAGGTTTATAGAATCTGAAAAACTCTTTGGCCTGATGGGACGTATTGATGTGAAGGTTGATGTCATTACATACAGTACACTCATCGATGGATATTGCTTGGCAGGTAAGATGGATGAAGCAATGAAGTTACTTTCTGACATGGTCTCAGTTGGGTTGAAACCTGATACTGTTACTTATAGCACTTTGATTAATGGCTACTGTAAAATTAGTAGGATGGAGAATGCATTATCTCTTTTCAGGCAGATGGTGTGCAATGGTGTTAGTCCTAATATTATCACGTATAACATAGTTCTTCAAGGTTTATTTCAGACTGGACAAACTCGTGCTGCTAAAGAAATCTATGTCAGGATTATCAAAAGGGGAATACAGCTTGAAATTAGCACATGCAACATAGTCCTTCAAGGACTTTGCAAAAATAATCTCACTGGTGAGGCACTTCAGATGTTTCAGAATCTATGTTTGATGGATGTAAAGCTTGAGACTAGAACTTTCAATATAATGATTGGTTCCTTGCTTAGAAGTGGCAGAAAGGATGAATCAAAGGATTTGTTTGCTGCTCTCTCGGCAAATGGTTTAGCACCGGATGTTGTGACCTATACCTTAATGATTGAAAATCTCATAGAAGATGGCTTGCTCGAAGAGTCTGATAATCTATTTCTTTCAATGGAGAAGAATGGCTGTGTTCCTAACTCCCGTATGCTTAATTGCATCGTCAGAAAGTTACTTCAGAAAGGGGAGATAGGCAGGGCTGGTGTTTATCTGTCCAAAATTGATAAAAATGACTTCTCCCTTGAAGCTTCCACTGCTGAGTTACTGATTTTGCTGGTTTCAAGTGGGAAGTACAATCAACATATGAAGGGTCTCCCTGAGAAGTACCACTTCTTTGTGAAATCCAGGGCTGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAISTAAPMLPCRRRLGRCPPLPSPPAPVQLRSSWKDSGDDAWIPPTRVSRWRSSWPSPPPRCHHVXXXXXXXXXXXXXXXXXRQGRCGGGGGGASIIRSLNRALAAVARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKGMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQGLTPDVVTYGTLIDGLCKSGRVDDAMLNLEQMISEGVTPNIVIFNTLIHGLCTSDKWEKAEELISEMINRGICPDTISFNSIIDNLCKEGRFIESEKLFGLMGRIDVKVDVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNGVSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEALQMFQNLCLMDVKLETRTFNIMIGSLLRSGRKDESKDLFAALSANGLAPDVVTYTLMIENLIEDGLLEESDNLFLSMEKNGCVPNSRMLNCIVRKLLQKGEIGRAGVYLSKIDKNDFSLEASTAELLILLVSSGKYNQHMKGLPEKYHFFVKSRAV</aaseq>

Gene Sequence

<dnaseqindica>1..2517#ATGGCCATCTCCACCGCCGCGCCGATGCTGCCTTGCCGACGGCGATTGGGGCGCTGCCCTCCCCTGCCATCCCCACCTGCGCCTGTGCAGCTGAGGTCGTCGTGGAAGGACTCCGGCGACGACGCGTGGATCCCGCCGACGCGCGTGAGCCGGTGGCGCAGCTCCTGGCCATCGCCGCCTCCTCGTTGCCACCACGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCAAGGCAGGTGCGGGGGCGGGGGCGGGGGCGCCTCGATCATCCGCAGCTTGAACCGCGCCCTCGCCGCCGTCGCGCGCGACAGCCCCGCGGCCGCCGTGTCCGGCTTCAACCGCATGGCACGATCCAGCGACGGCGCGGTGACTCCCACCTTGCACACCTATGGCATCCTCATCGGCTGCTGCTGCCGCGCGGGCCGTTTGGACCTCGGTTTCGCGGGATTGGGCAATGTTATTAAGAAGGGATATAGAGTGGAACCCATCATCTTTACTCCTCTGCTCAAGAGCCTCTGTGCCGAGAAGAGGACGAGCAACGCAATGAACATAGTGCTCCGCAGAATGACAGAGCTTGGCTGCGCGCCGCATGTCTTCTCCTACAACATTCTTCTCAAGGGACTCTGTCATGAGAGCAGAAGCCAAGAAGCTCTCGAGCTGCTGCACATGATGGCGGATGATGGAGGAGACTGCCCTCCTGATGTGGTGTCGTACAGCACCATCATCGATGGCTTGTTCAAAGAGGGGGATTCGGACAAAGCTTACAGTACATACCATGAAATGCTGGAGCGAGGGATTTTACCAGATGTTGTGACTTACAACACTATTGTCGCTGCCTTGTGCAAGGCTCAAGCTATGGATAAGGGCATGGATGTACTTAATAGGATGGTTAAGAATGGAGTCATGCCCGATTGCATCACATATAATAGTATTGTGCATGGATATTGCTCTTCTGGACAGTCGAAAGAAGCTATTGGAATTTTGGAAAAGATGTGCAGCGATGGTGTTGAACCAGATGCTGTTACTTATACATCTCTAATGGACTATCTCTGCAAGAACGGAAGATGCATAGAAGCTAGAAAGATTCTTGATTCTATGATCAAGAGGGGCCTAAAGCCTAATGTTATTACATACAGTACCTTGCTTCATGGTTATGCTACGAAAGGAGCTCTTGTTGAGATGCGTGATCTCTTGGATTTGATGGTACGAAATGGTATCCAACCTGATCGTCATGTCTTTAGCATACTAATATGTGCATGCACTAAGCATCAAAATGTAGATGTGGCCATGTTTGTATTCAGCAAAATGAGGCAGCAAGGATTAACTCCGGATGTAGTGACCTACGGAACATTGATAGATGGACTTTGTAAGTCAGGCAGAGTAGATGATGCAATGCTTAATTTGGAGCAGATGATTAGTGAAGGTGTAACCCCTAACATCGTTATTTTCAACACACTGATTCATGGTCTCTGTACCAGTGACAAATGGGAGAAGGCTGAGGAGTTAATCTCTGAAATGATTAACAGAGGAATCTGTCCGGACACAATTTCCTTTAATTCAATAATTGATAATCTTTGCAAAGAAGGGAGGTTTATAGAATCTGAAAAACTCTTTGGCCTGATGGGACGTATTGATGTGAAGGTTGATGTCATTACATACAGTACACTCATCGATGGATATTGCTTGGCAGGTAAGATGGATGAAGCAATGAAGTTACTTTCTGACATGGTCTCAGTTGGGTTGAAACCTGATACTGTTACTTATAGCACTTTGATTAATGGCTACTGTAAAATTAGTAGGATGGAGAATGCATTATCTCTTTTCAGGCAGATGGTGTGCAATGGTGTTAGTCCTAATATTATCACGTATAACATAGTTCTTCAAGGTTTATTTCAGACTGGACAAACTCGTGCTGCTAAAGAAATCTATGTCAGGATTATCAAAAGGGGAATACAGCTTGAAATTAGCACATGCAACATAGTCCTTCAAGGACTTTGCAAAAATAATCTCACTGGTGAGGCACTTCAGATGTTTCAGAATCTATGTTTGATGGATGTAAAGCTTGAGACTAGAACTTTCAATATAATGATTGGTTCCTTGCTTAGAAGTGGCAGAAAGGATGAATCAAAGGATTTGTTTGCTGCTCTCTCGGCAAATGGTTTAGCACCGGATGTTGTGACCTATACCTTAATGATTGAAAATCTCATAGAAGATGGCTTGCTCGAAGAGTCTGATAATCTATTTCTTTCAATGGAGAAGAATGGCTGTGTTCCTAACTCCCGTATGCTTAATTGCATCGTCAGAAAGTTACTTCAGAAAGGGGAGATAGGCAGGGCTGGTGTTTATCTGTCCAAAATTGATAAAAATGACTTCTCCCTTGAAGCTTCCACTGCTGAGTTACTGATTTTGCTGGTTTCAAGTGGGAAGTACAATCAACATATGAAGGGTCTCCCTGAGAAGTACCACTTCTTTGTGAAATCCAGGGCTGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028295