BGIOSGA028336

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Revision as of 07:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028336| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028336, complete gene.| tag = RIX4| ...")
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Gene Name

BGIOSGA028336

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028336, complete gene.

LocusTag

RIX4

Ensembl Transcript ID

BGIOSGA028336-TA

Ensembl Protein ID

BGIOSGA028336-PA

Length

2559

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11306897..11309455

Sequence Coding Region

11306897..11307020,11308375..11308636,11308714..11308760,11308842..11308873,11308954..11309021
,11309089..11309455

Genome Context

<gbrowseImage1> name=IndicaChromosome08:11306897..11309455 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:11306897..11309455 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCTACTCGCACACGATCCTTGCGCGGAAGAGCCCACTGGGCACGGTGTGGATCGCCGCCCACCTCGAGCGCAAGATCAAGAAGCCGCAGATCGACGGCATCGACATCCCCTCCTACGCCGAATTTATCATGTTCCCTGAAGTTCCAATTGCTCTGAGGTTGTCAGGGCATCTTCTTCTAGGTCTAGTTCGCATTTATTCATGGAAGGTAAACTACCTCTTCCATGACTGTAACCGGATGCTAAGCACAATCAGAACCGCCTTCGCTTCTGTACAAGTAGATCTGCCCCTTCATGCGGATCATGCGCCTTTTGACACCATCACATTGCCTGATACATTCCGTCTTGATGACATAAACCTAGATGATGCAATTCGTCTGATAGATACGCCAGATAATCATCGGAAGAGTCTGGACCAGATCACCCTGGCTGAAGGAGACTATCTGATGATTGATCTTGATGAGGATGCTAGAGTAGAGCTATCAGCTCCTGGACAATCTTCACACATGGGACCTGAACCAACTGACGAAGAGAGATTGCCTCCATTTCACATCGATTTCGGGCCAAGTGACAATATGGATGAGGAAATTTCCGTAGATCCTTCCCAAGGCAACAACTCGGAGGCAGTGAACACCAGTAACATAAATCAGGCAGATAAAGCACCAGATTTACCTGAAATAATGCGTGAAGCACCATTTGAGGGCCCTGAACTTAACTTGCCAGATATTGATGAGGTAAACAATGATCCCATGGATGTGACTGAGGAATCTTCACCATTTGTGTCCAAGAATATCACCCCTCCGGCACTGGAACGAACTATATCCCTGGTCAAGGTGGATTATCTGGGACATCCATTCCCAATGCACGAGGAAGTACAAGCACCACATATGACAATATAG</cdnaseq>

Protein Sequence

<aaseq>MFYSHTILARKSPLGTVWIAAHLERKIKKPQIDGIDIPSYAEFIMFPEVPIALRLSGHLLLGLVRIYSWKVNYLFHDCNRMLSTIRTAFASVQVDLPLHADHAPFDTITLPDTFRLDDINLDDAIRLIDTPDNHRKSLDQITLAEGDYLMIDLDEDARVELSAPGQSSHMGPEPTDEERLPPFHIDFGPSDNMDEEISVDPSQGNNSEAVNTSNINQADKAPDLPEIMREAPFEGPELNLPDIDEVNNDPMDVTEESSPFVSKNITPPALERTISLVKVDYLGHPFPMHEEVQAPHMTI</aaseq>

Gene Sequence

<dnaseqindica>1..124#1479..1740#1818..1864#1946..1977#2058..2125#2193..2559#ATGTTCTACTCGCACACGATCCTTGCGCGGAAGAGCCCACTGGGCACGGTGTGGATCGCCGCCCACCTCGAGCGCAAGATCAAGAAGCCGCAGATCGACGGCATCGACATCCCCTCCTACGCCGGTAAGCCCTCCCCTCCCCTCTCTCCCAAAGACGCGCTCTTTCTTTTCCCCTTTGTTGTTGCTGCGCGGGTAGAAAGGCGGCGCCTTTCAGCGGCGGCGGGGGTAGAAAGGATAAGCTTTTTTTTTTTTTTTTTGGTTCCTCCGTGCAACTGGGATTTGTTCCGGAGTTGTGAGTGAAAAATGTTTTGGGGTTAGCAATGGGGTCAAGTGATGGTACAGAGATTTGGATCCCAATCTGCATTCTGCAATTTGGGACAGGAAGGAAGAAGGTTTGGATAGTTTTTTTTAGAGCATTTTGCTAGGGGTTCGCAGTATTTATCTGGTTATCAGTTAGAATTTCGTGTAAATGATTGTTCTAGTGGCATGATTATTCATTAATGACAAAAGATACAACAAAATTTGGTCTTTTAGTTATGGGAGGTTGTGGTGGGGTGTGCACCGGAGACTTTTGGGTGGATTTTTGCAGGCCCTATTTGGATGCTAAACATTTCAAGAATGACAGCATTTGCATATCCAGAAGGAAGAAAAAAAAAGAACGACCAAACCCAATTTTTTACCTCCCAGTACAGTATAATCACTTGCGGTGGAACACTGCCTACTTGAGCCACTCTATTTGAAGAGTAATTCATATATGTTTGTTCTACTTATATGAATTACACAAATAAGTTTATATGTTATCCAGTCAAATCATAGAACATTGACAAATAAACTGGCTTGTTGTGCTTGCATTGTTCTTTTAGTACATTATGTAACAGTTTTTACTTTATTCTGTGATTAACTTTACATATTTAACCTTGCAAACTCAAGAACAAAGTAGATAAGCCTTATGTTTAGGAAGCTTACTGATGGAATTTTATTAGAACAAAACATGTTTTTTGACTGGAAGTAAAACAACTGGATTAATATTGCATATTTGGGCATAGATGTCTATACTCTATGGGAAGTTTTTTTTATTCTCTTTGGGAGGAAAGTGTGACAATTTTTTTTATTTCAACTTCGAACTGTGCTTTGCAAGAACTTGTATTATAATGGCATGCTGAATAGGTCACATTTTTCTGCAGGTCGCTTACCCTTGGCAATTAGTTTGTGTTTGCTTAGTGAGGTCATGTGTCGCCCTTAGGTGTTGTGCACGTGAGCGTGTTCTTGGGTGTGTTTGTCAGTTTAACCTCCTCTTTTTCTATCTATTTTCTTCTTAAAGAAATGAAGTTCAGTCCTCCCGCATTTTTGAGAAAAATAGGTTACATATTTTCCTTAGTTAAGTATTGAACAATTTTCTCATATACATTGAATTTTCCCTATGCTTTACTCTGCAACCTAATGCCATGTCTTCTAATGCATGAGTTTTGTTTTTTCAGAATTTATCATGTTCCCTGAAGTTCCAATTGCTCTGAGGTTGTCAGGGCATCTTCTTCTAGGTCTAGTTCGCATTTATTCATGGAAGGTAAACTACCTCTTCCATGACTGTAACCGGATGCTAAGCACAATCAGAACCGCCTTCGCTTCTGTACAAGTAGATCTGCCCCTTCATGCGGATCATGCGCCTTTTGACACCATCACATTGCCTGATACATTCCGTCTTGATGACATAAACCTAGATGATGCAATTCGTCTGATAGAGTGAGTACTTTTCTTCTCATATATTTTCTCCGCGTCATACAACCTCAACTAATATTATTGTGTTAACTTTCTGACAGTACGCCAGATAATCATCGGAAGAGTCTGGACCAGATCACCCTGGCTGGTATACGAAGTTCAATTAGTCAATATATGTATTATTATCATTCCAATGCGGATGCTTAATGATTTCATTTTGGTGCTGCAGAAGGAGACTATCTGATGATTGATCTTGATGAGGTATTCCTCACTGACTTGCGCTTTTTGCAGGCTTGTTTAGTTTGCATGTTTTTTAATATTTGTGCTTATAAATTGTGTAGGATGCTAGAGTAGAGCTATCAGCTCCTGGACAATCTTCACACATGGGACCTGAACCAACTGACGAAGAGTACGTGTCATGTTTTTTTTCCTTCTAATTTCTATTTTGGTGGACTCATGTCCGCTTTGCTTATCAGGAGATTGCCTCCATTTCACATCGATTTCGGGCCAAGTGACAATATGGATGAGGAAATTTCCGTAGATCCTTCCCAAGGCAACAACTCGGAGGCAGTGAACACCAGTAACATAAATCAGGCAGATAAAGCACCAGATTTACCTGAAATAATGCGTGAAGCACCATTTGAGGGCCCTGAACTTAACTTGCCAGATATTGATGAGGTAAACAATGATCCCATGGATGTGACTGAGGAATCTTCACCATTTGTGTCCAAGAATATCACCCCTCCGGCACTGGAACGAACTATATCCCTGGTCAAGGTGGATTATCTGGGACATCCATTCCCAATGCACGAGGAAGTACAAGCACCACATATGACAATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028336