BGIOSGA028408

From RiceWiki
Revision as of 07:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028408| Description = Putative steroid sulfotransferase 3Putative| Definition = Oryza sativa Indica Group BGIOSGA028408, complete gene.| ta...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028408

Description

Putative steroid sulfotransferase 3Putative

Definition

Oryza sativa Indica Group BGIOSGA028408, complete gene.

LocusTag

K0007B01.32

Ensembl Transcript ID

BGIOSGA028408-TA

Ensembl Protein ID

BGIOSGA028408-PA

Length

1287

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13474830..13476116

Sequence Coding Region

13474830..13475347,13475627..13476116

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13474830..13476116 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13474830..13476116 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAACGACCGCGAAATTAGCAGGATTGCTTCGCGATGAGCAAGGTCCCGTCGCGTTCAATGACGCCGTCGACGAGGATGCCGTCCCGGTGGAACCACTCACGGAGCACGACGACGCCATCTTCGCCATGCCGGCGGCCCACTGCGACAACATGCAGTTCCGCTGCTACCGAGGATTCTGGATATCGGAGATGTGGGCGCCGGGTGTGGTCGCCGTGCACCGCAGCTTCGCACCTCGCGCCGACGACGTCATCGTTGCGAGCCTGCAGAAGTCTGGTACCACGTGGCTCAAGGCCCTGACTTTGGCCACCATGGCGCGCGGCGCGTGGCCGCCGTCCAGCCACGACCACCCGCTCCGCCGCCTCAACCCGCATCTGTGTGTGCCTTCTCTGGAGGTCCTGTACACCCAAGGGCGCGACGCTCTGCTGGACATGCTGCCGTCGCCGAGGCTCTTGTCCACCCACATGCCGCTCTCGCTGTTGCCTCCTTCGACCTGCAAGATCGTCTATATTTGCAGGGACCAAAAAGAGACAGCAGTTTCTCTATGGCACTTCATGAAGCGTAGACATCCTGACTTGACATTCTCTGAGGTACATGAGGCCTTCTGCAATGGCATCTGCATGGGTGGACCTGCGTGGGATAATATTCTTGAGTTCTGGTACGCAAGCAATGCAGAGCCAACAAGGGTACTCTTCCTGACCTATGAGAAGGTTCTTCAAGACCCATGTGACGCAGTTAAGAAGCTAGCTCAGTTCCTTGGTCAACCGTTCTCGGGTGCTGAAGAAGAAGCTGGTGTTGTCACAGAGATTACAGACCTCTGCAGCATTGACAATTTGAGGAACCAAAAAGCTAACAAGTATGGCTTCATTGGCGGGAAGATCTCGCATGAATCCTTCTTTAGGAAGGGGATGGCAGGGGACTGGACGAACCACATGACTCTTGAGATGGCAGAGCGTTTGGATTCTATCCTCCGGGAGAAGCTCGATGGGTCAGGGCTAATTGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MSTTAKLAGLLRDEQGPVAFNDAVDEDAVPVEPLTEHDDAIFAMPAAHCDNMQFRCYRGFWISEMWAPGVVAVHRSFAPRADDVIVASLQKSGTTWLKALTLATMARGAWPPSSHDHPLRRLNPHLCVPSLEVLYTQGRDALLDMLPSPRLLSTHMPLSLLPPSTCKIVYICRDQKETAVSLWHFMKRRHPDLTFSEVHEAFCNGICMGGPAWDNILEFWYASNAEPTRVLFLTYEKVLQDPCDAVKKLAQFLGQPFSGAEEEAGVVTEITDLCSIDNLRNQKANKYGFIGGKISHESFFRKGMAGDWTNHMTLEMAERLDSILREKLDGSGLIV</aaseq>

Gene Sequence

<dnaseqindica>1..518#798..1287#ATGTCAACGACCGCGAAATTAGCAGGATTGCTTCGCGATGAGCAAGGTCCCGTCGCGTTCAATGACGCCGTCGACGAGGATGCCGTCCCGGTGGAACCACTCACGGAGCACGACGACGCCATCTTCGCCATGCCGGCGGCCCACTGCGACAACATGCAGTTCCGCTGCTACCGAGGATTCTGGATATCGGAGATGTGGGCGCCGGGTGTGGTCGCCGTGCACCGCAGCTTCGCACCTCGCGCCGACGACGTCATCGTTGCGAGCCTGCAGAAGTCTGGTACCACGTGGCTCAAGGCCCTGACTTTGGCCACCATGGCGCGCGGCGCGTGGCCGCCGTCCAGCCACGACCACCCGCTCCGCCGCCTCAACCCGCATCTGTGTGTGCCTTCTCTGGAGGTCCTGTACACCCAAGGGCGCGACGCTCTGCTGGACATGCTGCCGTCGCCGAGGCTCTTGTCCACCCACATGCCGCTCTCGCTGTTGCCTCCTTCGACCTGCAAGATCGTCTATATTTGCAGGTACCTATTAAACACATTTACTCTATTTTACACCAAAGGCCTGATCAGTCCAGCAGCTTCAGCATGGCTACGATGTTTAATTTTTGAAGTTTATTGGATAATTTTTCAACTCATTTTTTTGTTAACTCTAATATTTTTTCAAGCCGAAAATATATTAAGTAGCTTGTACCTGACAATCGAGAAGACTTGTAAATCAAAGTCCAAAACGTACCCTTGTAAATTTTTTGCATATTCTCCTCTGGATAAAATCTATTATATTGTACTGCTGCTAATTTATAGGGACCAAAAAGAGACAGCAGTTTCTCTATGGCACTTCATGAAGCGTAGACATCCTGACTTGACATTCTCTGAGGTACATGAGGCCTTCTGCAATGGCATCTGCATGGGTGGACCTGCGTGGGATAATATTCTTGAGTTCTGGTACGCAAGCAATGCAGAGCCAACAAGGGTACTCTTCCTGACCTATGAGAAGGTTCTTCAAGACCCATGTGACGCAGTTAAGAAGCTAGCTCAGTTCCTTGGTCAACCGTTCTCGGGTGCTGAAGAAGAAGCTGGTGTTGTCACAGAGATTACAGACCTCTGCAGCATTGACAATTTGAGGAACCAAAAAGCTAACAAGTATGGCTTCATTGGCGGGAAGATCTCGCATGAATCCTTCTTTAGGAAGGGGATGGCAGGGGACTGGACGAACCACATGACTCTTGAGATGGCAGAGCGTTTGGATTCTATCCTCCGGGAGAAGCTCGATGGGTCAGGGCTAATTGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028408