BGIOSGA028412

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Revision as of 07:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028412| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028412, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028412

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028412, complete gene.

LocusTag

OSJNBA0063H21.109

Ensembl Transcript ID

BGIOSGA028412-TA

Ensembl Protein ID

BGIOSGA028412-PA

Length

6916

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:13603797..13610712

Sequence Coding Region

13603797..13603879,13604020..13604275,13604691..13604711,13605304..13605328,13605961..13606045
,13606123..13606191,13606841..13606953,13608654..13608765,13608868..13609011
,13610306..13610480,13610566..13610712

Genome Context

<gbrowseImage1> name=IndicaChromosome08:13603797..13610712 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:13603797..13610712 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTCGCACAAGCAATAGCCCCGACAAGCCCAAAGAAATTCACATCAAAAACAAAAGGTAAAGAAGAAAGGGTTAATTGGTGCCATTTCGAGGCTCTGATGCCTGGGCGGTCTCACTTTCCTGTTCATCGCGAACTCCCAGCGGATTTCTTGAGTGCGAGTATGGCCATGCAGCCGCAGCGCCCCATAGAAATACCGGAGAATGCAGAGCGGATTTGCTGCCGATTTGCTATGGCGGTGGAGAGCGAGGAAGAGAGGAAAACGGGATGGGCGCACGAGATTCGTCGCCGCCGCCGCCGCTTGCGTGGATGGAAGGATTGCGTGAAGCCGCTCAGGCCCGAACGGAAAGAAAACAAGGTTGTTGTGGATAATCTGTTTGATACCAGGAAACTGGATGAGGAACTTGATGGTTGGCTGAGGGCTGCTGGTCTCACCAAGTCCCCTGATGTGAGGGCAGTAATTGCGCCCCATGCTGGCTATTCATACTCAGGGCGGTGTGCGGCTTATGCTTTTGGCAACATTGATCCAACTAACATTTCTCGGGTCTTCCTGTTAGGCCCTTCACATCACTACTATACTCCAAAATGTGCATTAACAAGAGCTACTATTTATAGCACCCCAATTGGGGATTTGCCAGTAGACCATGAAGTAATTGAGGAACTCAACGCTACAGGAAAATTTGATTTTATGGACCTTAGTGTGGATGAAGCTGAACATAGCATGGAAATGCATTTACCCTATCTTTCTAAAGTTTTTCAGGGACATAACGTAAAAGTTGTCCCTATCCTTGTTGGTGCCCTTAACTCCCAAAATGAAGCCATGTATGGGCAGTTGCTCTCTAAATATCTTGACGATCCGAAGAACTTCTTTTCTATCTCCTCAGATTTCTGCCACTGGGGAACCCGGTTTAGTTACACATACTACGACAAGAGCCATGGTGCTATACATAAATCGATAGAGGCCTTGGACCGCATGGGCATGGAGATAATAGAGACTGGTAATCCAGATGCATTCAAGCAGTACCTGCAAGAGTATGAGAATACCATATGTGGACGCCACCCCATCAGCGTTTTCCTCAGCATGCTGAAACATTGTTCGACAAAGATCAAGATCGGATTTGTTCGGTATGAGCAGTCAAGCCAGTGCAAGAGCATGAGGGACAGCAGCGTGAGCTACGCTTCTGCGGCAGCCAAGGTGGATACTCCAGCCGAAGAAGAGAAGGATTAG</cdnaseq>

Protein Sequence

<aaseq>MDVAQAIAPTSPKKFTSKTKGKEERVNWCHFEALMPGRSHFPVHRELPADFLSASMAMQPQRPIEIPENAERICCRFAMAVESEEERKTGWAHEIRRRRRRLRGWKDCVKPLRPERKENKVVVDNLFDTRKLDEELDGWLRAAGLTKSPDVRAVIAPHAGYSYSGRCAAYAFGNIDPTNISRVFLLGPSHHYYTPKCALTRATIYSTPIGDLPVDHEVIEELNATGKFDFMDLSVDEAEHSMEMHLPYLSKVFQGHNVKVVPILVGALNSQNEAMYGQLLSKYLDDPKNFFSISSDFCHWGTRFSYTYYDKSHGAIHKSIEALDRMGMEIIETGNPDAFKQYLQEYENTICGRHPISVFLSMLKHCSTKIKIGFVRYEQSSQCKSMRDSSVSYASAAAKVDTPAEEEKD</aaseq>

Gene Sequence

<dnaseqindica>1..83#224..479#895..915#1508..1532#2165..2249#2327..2395#3045..3157#4858..4969#5072..5215#6510..6684#6770..6916#ATGGATGTCGCACAAGCAATAGCCCCGACAAGCCCAAAGAAATTCACATCAAAAACAAAAGGTAAAGAAGAAAGGGTTAATTGGTGAGCTCCAAAAGAACTTCTGAATCTTGTAGCTGGACAGGTGGTGGAAACAAAGCAAACACATGAAAAACACTAACTCACTAAGAACCAATCTCTCGGCCACTAGGAAGACAAATTTAACTTGTGAACCATGCATCCAGGTGCCATTTCGAGGCTCTGATGCCTGGGCGGTCTCACTTTCCTGTTCATCGCGAACTCCCAGCGGATTTCTTGAGTGCGAGTATGGCCATGCAGCCGCAGCGCCCCATAGAAATACCGGAGAATGCAGAGCGGATTTGCTGCCGATTTGCTATGGCGGTGGAGAGCGAGGAAGAGAGGAAAACGGGATGGGCGCACGAGATTCGTCGCCGCCGCCGCCGCTTGCGTGGATGGAAGGATTGCGTGAAGCCGCTCAGGGTCAGGGACATCTAGGGTTAACATATTGGGATGGATTGGTGGAAAATGGGCTGGGCCGCCGGCTATTGGGCCACTGGCCTGTTACTCGCCCTCAGCTCGTTTGAGCTCGCGAGCCACTCGCGAGCCAGCTCGAGCTGGCTCGTTATGTGTAACGAGCTGAGATGTCAGCTCGGCTCGCTAAGAAAACGTAACGAGCCGAGCCGAGCCGAGTCGAGCTAGTCACGAGCCGAGCGAGCTAACGAGTCACGAGCTTTTCGTCCAGCCCTACCCACCGGCCACCGGGGATGGCCCCGTTGCCATCCCTCCAGTGACGACACAACTGAATTCGGTGCCTTCCTTCGGCTAAAGCGCAGAGAGAGAGAGAGGGAGGACCGGACGGCCTACTTTATTATTTTTTTTCTTTTTTATTTTGCAGCCCGAACGGAAAGAAAACAAGGTGAGAGGGTGAGGAAGGGATTCCTCTTCCTTGCTGCCGCCATCGAAACCGCTCTTCTTCCCTGCTGCGGGGTGAGGGATGGAGCGCGTGAGGAGGGCTTCGCACGCCGGCTCTTGGTACACCAACAATGGTACTCGATCCACTCTCCTCCGCTATTGCAATCTCAACTAGTTCAATCCGATCGATGGATTCTCCCACTTCTGGGCAGGGGGAGGGGGTTGGACGAGGGGACTTCCTGCTAGTTCAATCCGATCGATGGATTCTCCCACTTTTCGGGAGTGGGGAGGGGTTGGAGGGGATTTCTTGCTGACGAGATTTGGGGAATTAACGGGGTCCGGTTCGCTGGTGGTGATTACTCGATTCCGCGGCCTAGCCTAGCTTCTTGGAGTGCACTTGTGTAGTTGTGTTGTCTGTTGGGGAGGGGAGAGTGTGTTGACTTGTTCGATTGTGTGCGCTTTCCATAATGCAAAAGAGGATGCTGCATAGTGCATACCTTCGGAGTGTTAGTTTTAACCGATCTGGAGTGTAAATAGGCCAGCAGTTCTTCGAACTGTTTTGATAACTTGATATGTTGGTGATTGATGTTCTTCAGGTTGTTGTGGATAATCTGTTTGATAGTTAGCCAAAGATGCGTGCTCTAATTGCTTGGTGGGCATTTTGGATGATTTCGCCAGTCATTACGGCTCTCTTGCTTCAAATTTAGTTGCTGAGTTGGCAACAGATTTGTGAGAACAATGTATATTGTTAGACAAATGCAGGAACCGCTTGCCATTGTTATATAGGTTTCATATAAATTATGCACTTTCGGAATAGTTTTTCATTAGAAGAAATGAATTGTCGGCAATCTTATCGTATGGACATGGATCAATTTTATTGTGCTATTAGGCATGATGACATTTTAGGTACTGCTTGTTAGATTGATATTATTCTTTTTGCCCAGACACGTAGTAGCCTGACATGATAGATGAAACTGGATCATTTGCTATTTGTTATGCAAATGCCTTACTTTTATTTTAGCTGTCAGGCCATTCTAGAAACACATGAGCTGTTTAGTTTCACTGGGAGTCGAACCATTCATTCCTAGCTGACTCCATTATCTTCTTGCTCTGCAGTTTCCAACATTAATTAATAAAAGCATGTAATTTGTAGAAAAATTTCAGGGATCTCAACCAGTTTCTTCTATTTTTAAATTTCTGTTCGACAATTTACCACTTCAGCTCCGTCTCCTAAATTCATTGCTCCATGTTAGCCAGGAAACTGGATGAGGAACTTGATGGTTGGCTGAGGGCTGCTGGTCTCACCAAGTCCCCTGATGTGAGGGCAGTAATTGCGCCGTAAGTTGGTATTTAACTATTCATATGACAGTGAATTTCTTCTGTTCTATTTTAACAATTGTTTCTTTCCATTACAGCCATGCTGGCTATTCATACTCAGGGCGGTGTGCGGCTTATGCTTTTGGCAACATTGATCCAACTAACATGTATGTTATTTACACATTACTGTTACTCTTTCAAAATTTCAGATCTTCTAATAGTAAATCACTGTCTTGCTGTACCGGTAATACCTTGACTTGAATGCTTTCATGTAAAAGTACCACAGATGTACCGTTTTATCAACCTGTAATTTTATTTCTCAGTGGTATAATTCGTAAAGTGATATTTATTTTATTTTGAAAGTTGGGCATGGGTTCTAGCATTAACTAAAGAATGAGATGGTCACATGTGTTAATCCTAGAGTTTAAACCCGGGTGAGTGAGGAGGTTAAACACCTTCCTCACCACCAAACATCCTATGTCAGTTGTTCGAACTGAACGCCAAGATAATCATAAACATTCACTTTTATTGCATAGATATATGATATACTTCTCTCATTCTGAACGCTGCAATAGTTCTGCTACTTTTGAATTTTGAATATGTATTTTTAAGAATAGTTTTGGTAGATTTCTTACTTGTCTCCTTAGCAGCCATGAAAAGGGAGATGTAAAATCAAAATGTGAAATTCACAATCAGCTTCAGCTTTTAAGAATGCCCAAAAAATACTATTTAGTATTTACATTATTATAGCTGATTACTTTATTCTAATTTTCACTTTGCCCTGTTATCTCATATGTTTTCCTGTATGTGATCCAGTTCTCGGGTCTTCCTGTTAGGCCCTTCACATCACTACTATACTCCAAAATGTGCATTAACAAGAGCTACTATTTATAGCACCCCAATTGGGGATTTGCCAGTAGACCATGAAGGTATGCTGCTACTGAGCTTTGTTTTTGTTTGACTTGGATATTTTACTTTCATAATATTACATGCCATGCAATCTGTTAAATTACGGTCTTTACCTAAGATTTCTCTTCGATTATAGGCCAGAACACGAACATTAGTATTGCCATAAATCTGACCCAATATGCCTTTCATGCATGATTAGCACTTTAGCAGTACTAATATGATTTTACAACATAATTATTTTTAGACAGCCATCCATATTAATTATTTATGTTTTGAACTTGCTATATTTTCAGACAGAGCCATTTGTGCTTAAGATTCCCGTTTAAAAGAAGGTAGTGGTGGTAACAATCTGCCACCCCACCTGCTACCGTTGCTACTTTCTCTTGAGTTGCCTGAAAATTTTCAGTATCACACATTAGTCAAATATAATTGAATTGCCACAGGCACACAGTACATTATATGAGCTACTATATTATTCAATGTGCTTAAACATTGTCAAGTGCTCCTAGTTGCAAACAATGTGTAACTGGTTTGATGCAAAAACCACATATCTACGAATGTGGTACTCGATTAGACACCACTTGGTACTACAGATGTGGACAGACCCCTGTCTAGATTCGTAGTACTAGGTGGTGTCTTAGATTTGTATAGTACTAGGTTGATATATTTTGGGTCGGAGGGAGTATATTTCTATCAGTAGCAATGCATAGCCTTTAGTTACATTGATGAAAGCAAACATCATGGTCATAAGACCCTTGCAAGGCAGACCAGCATAAGCCATAAACAAAATAAGCAAGTTGCCAGAACAAACTATTTAGCCTTCAAACCTCACTAAACAAAACACTCAGGCTATCAGTTAAAGCGCTGAGCATGCCCATACCCTTCCTAGCACAATAACTGATAGTAGGGGCGTCACATCCCTAACTAAACATTCTTTGCAGGTTCTTATCCATGATGTATCAACAAATCTCTTCCTGTTGTGCTTCAACAATCTGCTTGCATTTTGTTTGAATTCTACCCATCTATCGAGAAAAACAAAAGCAAATTAGTATAAGTCTGGTCTGAGGGGAAGAGGGAGCCATGTTGCACACTAGGCCTTCTCTCCAAGGTGGTTACAAAGGCAAAGTTCTATGTGGCAAAGATGGAGGGCGTTGGTTTGGGACGGTGTATATCATGCCAGATAGGGTAGCTCAGGGTCTCAGTTAATGGGTCATCACAAAATTATACGAGATTGGAAAAAAAGTTCTGAAAGGCACCTCTCCAGGTCAAATGCCTTACCAAAGGAAATATTTTTGGACTTTTTGCAAGGTTACCTACTTAAACCAATGTTTAACTCTCTAAACCTTGCCAGAATTGAGACCCTCCTGCACTCACTAAACAACTTACCCCTTTTTTCTGTAAATGGGCTGAGGCCAATCTTCTTTACAGCCCTTTTGAACAACTTCCAAGCCCACTTATTGAGCAAACAGATGGTCACAATTTCGTTATTAAGGATTCCCCGACTCTCCAAAGTTATAAGAATATGTTCTCTAATCCCTCCAGAATAATTTCATCCATAGTGTTCATTTTGTGATGACCGATGAGTTCCTGAAAGTGATAAAACCATATATGAGATGAAATAGTTTGTTGAGCTTGAATTATATTTTGCATCCTGTGTGTTGATAGATTGCCTTTCTATTTGAATATTCTATGTATCTTACTTACAATACTGTTTTTGCAGTAATTGAGGAACTCAACGCTACAGGAAAATTTGATTTTATGGACCTTAGTGTGGATGAAGCTGAACATAGCATGGAAATGCATTTACCCTATCTTTCTAAAGTTTTTCAGGGGTACTTTCTTTTCTGATAACTTTGCATCAATCTAGTAATCCCGTTTAAAAATATACCAATCCCACACTAAATTTTCTGTCTTTTCATGTTATTATCTTACAGACATAACGTAAAAGTTGTCCCTATCCTTGTTGGTGCCCTTAACTCCCAAAATGAAGCCATGTATGGGCAGTTGCTCTCTAAATATCTTGACGATCCGAAGAACTTCTTTTCTATCTCCTCAGATTTCTGCCACTGGGGAACCCGGTAAATACTTAATTTCTACTGTCAGCTTTTTCATGATTTGCCAACTTGCTTGTTTTCCTATGGTAATCTTTAGTGTGAGAAAACTTTCATTGTCCTGTGTCACATTTGTCATCTACTAGTTCTGCAGAACTAATTAATGAAGTTTGCAATGTTTGGCCTATTCGAGGCTAAAGATCTGGCCGTGTAGAAAAGCAGAAGAGTTGGCATGCCTGGTTTTTCATTAAATTTGCTACCCAATTTAGTTAAAATGAGCTCTATAAAATCCACAATCTTTAGAGTTCTCTTGCCGAATATTTTTTTTATTAGACCTATAGATTGTCCAAATTCTTAGTCTTTCTACTTTTACTCTTTCCAGAAGGTAGATAGTATGTCATAATAACAGTTTTAGCTATGACTCTCTTCAGATCAATTCCTCATCACACTTAGAAATATGGTTCTTTCCAAGTTTAAATTTCAGTACAAAATCTGAATCTTGTATGTACAAATTTGGACTTCAGTAGATGTCAAAATTTGCTCTCAATAACAAAAAGGGTACCATCGAATGAGCAGCATTTGTCTATCATTGAACCCCTCATAGCCAGAGTACTCTAGTTATTGTTGTGCAGTATCTTATCTTGCCACTTAGCATAAGTGCGACTTGTCATGTGGAATAACATTTAGGCTCAAATAATCGATATAGGCATTAGATGGAATTTGAGAACCCATCAGATCCAATTGGCAGATTCTAGAACCATCTCAATTTAGAAAGAAAAAAATAACTCCACCTGGCACAGTGTTGTAATAACACTATATTGCAAACCCCAATCTCGAATCCATCTTCGGTGGATGGTGACAGCACCTTGCTTCCCTGCTAAATTCATCAATTGAAACACCAGATGCTGTAGATGTATCCTGGTTTACATCTGCCACATGGCTTAGCCTGATCAGGTTGGGGTCCACTATCCGCCCAATGATGATGATCACCAGTGTGCAAGCATTTGGAGTTGTCAGGAGTGTGAAGATGGGGGGAGGTCGCTTTGGGCTCATGGTGTTTGCGGTTCAGGGACGACACAATTTATTTGCATAAGATTTTGGTGGGAAGTGAAAAAGGGAGCTGATTTGCTCCAGGCTGTGTCAGGCGAATCTGCTTTAATTGATAGCGCAGAAAACGTGATTGAACAGCCCAGATCAATTCATTTCATAATTGGACACCAAAGAATGCTTGCCCATGATACATCACCAGGCTAAGTTGTAGTTGTTACTTCAATCTTATAGGATTTGTATATGATTATGCTCATCCGCATCGTCTCATCAGGTTTAGTTACACATACTACGACAAGAGCCATGGTGCTATACATAAATCGATAGAGGCCTTGGACCGCATGGGCATGGAGATAATAGAGACTGGTAATCCAGATGCATTCAAGCAGTACCTGCAAGAGTATGAGAATACCATATGTGGACGCCACCCCATCAGCGTTTTCCTCAGCGTAAGCGTTGTGACGATCTAACTAGTGTTCTCTCTTCATTTCTACTTCTATAACTTCATCATCTTTATGTAATATAATGTTCCAGATGCTGAAACATTGTTCGACAAAGATCAAGATCGGATTTGTTCGGTATGAGCAGTCAAGCCAGTGCAAGAGCATGAGGGACAGCAGCGTGAGCTACGCTTCTGCGGCAGCCAAGGTGGATACTCCAGCCGAAGAAGAGAAGGATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028412

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028412&oldid=34669"