BGIOSGA028458

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Revision as of 07:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028458| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028458, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA028458

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028458, complete gene.

LocusTag

OSJNBA0049I01.2

Ensembl Transcript ID

BGIOSGA028458-TA

Ensembl Protein ID

BGIOSGA028458-PA

Length

5634

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15520800..15526433

Sequence Coding Region

15520800..15521002,15522239..15522295,15522831..15523087,15524103..15524212,15524305..15524360
,15524449..15524533,15524613..15524660,15524816..15524890,15524995..15525106
,15525418..15525469,15525554..15525605,15525771..15525828,15526098..15526196
,15526303..15526433

Genome Context

<gbrowseImage1> name=IndicaChromosome08:15520800..15526433 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:15520800..15526433 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCATTCTCTTCGCCTTCCCTACACCGCATTTATTGGGCATGTGGAGTCCAACGAGGTTATATGGTTGATGGAATCGATCAAGTTGGCAAGGAGGAAGGTAACTGCGGTGGCGAGGTTGCCATTTGCCGTGGCTGGGGAGGGAGAAGAGGGAGGAGGTCAGGGAAAGGGTGATGAGGTCAGGGGCACCAATGGACAATGCGACCAGCAGCCGCGCCGAGCTCCTCAGATCCCTCGTGCATTCCGCCTTCTCCCGAGCAGGACGATGGGCGCTTCTGCAGCTACCGGTATGCAGATGGTGGCTGCACGCCCCTGCATCTCAGCCTCCCAGGGAATGCTTACTTCCAGGGCGGCGGTCTCCCGGATTGGCCGCGCACTCAGCACCACCACTGGCTTTGCAACCTGTCCCAGAATCTGCTACTCCAGCCCTCTTGGTTCTTCCAAGCGCAGCGGTGTCGCCATCAGAGCAATGTCAAGCGAAAGTGGCCCCCAAGGCCTACCAATTGATCTTAGAGGTAAAAGGGCGTTCATTGCTGGAGTTGCTGATGACAATGGCTATGGCTGGGCAATTGCAAAGGCTCTTGCTGCTGCTGGTGCTGAAATTCTTGTTGGTACATGGGTGCCTGCACTAAACATATTTGAGACAAGCCTAAGGCGTGGAAAGTTTGATGAATCACGAAAGCTGCCTGATGGATCTCTTATGGAAATTGTTAAAGTCTATCCACTTGATGCTGTCTATGATTCCCCTGAAGATGTTCCTGAAGATGTCAAAGGAAACAAAAGGTATGCTGGGTCATCAAATTGGACTGTTAAGGAAGTTGCTGAGTCAGTCAAGAATGACTTTGGCAGCATTGACATTTTGGTGCATTCTCTAGCTAATGGTCCAGAGGTAACAAAACCACTGTTGGAGACATCAAGAAGAGGGTATCTTGCTGCACTGTCAGCATCGAGTTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGGTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCCTGGATATGGTGGTGGCATGAGTTCAGCTAAAGCAGCTCTTGAGAGTGACACAAAAGTACTTGCTTTTGAAGCTGGAAGGAAAGGGAAAATCAGAGTTAACACCATATCTGCAGGTCCTTTGGGAAGCCGAGCTGCCAAGGCAATTGGATTCATTGAGAAGATGATAGAATACTCTTATGTTAATGCACCGTTGCAGAAAGAACTGTTGGCAGACGAAGTGGGGAACACAGCAGCATTCCTGGTGTCTCCATTGGCTTCCGCTATCACTGGCTCGACTGTTTACGTTGACAATGGACTCAATACAATGGGGCTTGCAGTTGACAGCCCTACAATATCATCATAG</cdnaseq>

Protein Sequence

<aaseq>MSHSLRLPYTAFIGHVESNEVIWLMESIKLARRKVTAVARLPFAVAGEGEEGGGQGKGDEVRGTNGQCDQQPRRAPQIPRAFRLLPSRTMGASAATGMQMVAARPCISASQGMLTSRAAVSRIGRALSTTTGFATCPRICYSSPLGSSKRSGVAIRAMSSESGPQGLPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEIVKVYPLDAVYDSPEDVPEDVKGNKRYAGSSNWTVKEVAESVKNDFGSIDILVHSLANGPEVTKPLLETSRRGYLAALSASSYSFVSLLQHFLPIMNPGGASISLTYIASERAIPGYGGGMSSAKAALESDTKVLAFEAGRKGKIRVNTISAGPLGSRAAKAIGFIEKMIEYSYVNAPLQKELLADEVGNTAAFLVSPLASAITGSTVYVDNGLNTMGLAVDSPTISS</aaseq>

Gene Sequence

<dnaseqindica>1..203#1440..1496#2032..2288#3304..3413#3506..3561#3650..3734#3814..3861#4017..4091#4196..4307#4619..4670#4755..4806#4972..5029#5299..5397#5504..5634#ATGTCCCATTCTCTTCGCCTTCCCTACACCGCATTTATTGGGCATGTGGAGTCCAACGAGGTTATATGGTTGATGGAATCGATCAAGTTGGCAAGGAGGAAGGTAACTGCGGTGGCGAGGTTGCCATTTGCCGTGGCTGGGGAGGGAGAAGAGGGAGGAGGTCAGGGAAAGGGTGATGAGGTCAGGGGCACCAATGGACAATGGTAATGCATAGTTGGTCATTCTCAGCGTGAGGTCAACCTCGGAGTTTATGCGGGTCTTGAGGTTGTGGTACTCCTCGCTAGCTCGTTGTGCTGCTCCTCTTCATTATAGGTAGGTAAGTTACTAGACTAGTATCAGATATCAGCTGTGAAACGTCGAGGCATATCACAGCTGATACCAAGTATCAGGCATGGTACCTCGGGGAATCATGACTGATACCCACAAGTATCAGCCCTGATACCCAGATACCAAGATCTGATACCTAGGTACCAGCCGGTACCCACAAGTATCAGGTACCAAGTACCACCTCAAAGGAGGGAACGCACGCCATCATCGCTAGGCCAGCTAGTGAGCTCCCTGCTGCCATATCCTATCATCTCGTCTCTTCCTCTCCTCAACGTGCCCCTCTTCCCTTCTGTTGATGTGGCTAGCGAGACAAAAAAAAAAACAATAAGTACAGTTGCTATTTGCTTGCATGCGAAAGCTCAGCTATACATAGGAAAAGAAGAGGGAGGATTCAGTGATAGCACTGATTGGTCTGGGTGATATGGCCTATTCTGATTGGGTGTGGTTGGTTTGATTTTCTGTTAAGCAAGCTCCAAATGATTTTTTCTCCTAAACCATTTATCTAATTTATGATTTGATTACACTATTATATTTGTTACAATTAAATCTTTAAAACAAGATCTCAGATGATTATATTTTTGATAAAAAAATATATATGACAAATGGTCCCACTAACTTATGGCTTTTCCCATCCGTGCTATATCCTTCCAACCAAACAAAAAATTGGATCGCCATATCTATACAAACCAAACAAAAATTTGGATAGCCATATCCATCAAAATATGTATGGACATATCCCATCCATGCATGACCGTGAACCAAACACACCCTTAAGTATCCTATCCTCTAGTCTCTCTCTTGATTACGTGGAATGCACTGTTCTCAAGCAGTAGGTGCCACAAGCGATGGGCTTCTCAGCTCATCATGTTCACCACTCAGGGCCGAATGAAAAGCCCACCGACGCAGCAGAAAGGCCCAAAAAAAACCCTTCCTAGTAGTAACAAACAAGCAGCCACGCTTCCCTTGGTTTCTCAGCGACTCGACTCCGCCCGTCCGGCTAACTCCGCGGAGTCGCCAACACGAACCCCCCCTCCTCTCTTCCTCCCTCCCTCGGTCTCATCGAAAACCCCCACTATTACTACCACTCCCCCTCGCCTTCTCCGCCTCCACAGCGACCAGCAGCCGCGCCGAGCTCCTCAGATCCCTCGTGCATTCCGCCTTCTCCCGAGGTGAGCCACCCGCTTCCTCCTCCCTCGTCCCCGATCCGTGCCGCCCACCTCCTCGCTCGCTGTGCGTGGCGCGGTGTTTCACTGATCTGTGCTTTGCGGGAGAAAGGAGGAGAGTTGGAGATGTTTTGTTTGTGTTGTCTTGTTTTGTTTCTTGGACAGGTCAAGTGGGGATGCGGTTTTTTTTTTTCTTGCCCCAGGGTTATCAGCGAAATGTTGTTCTGTCCAAATCGTGCTCCTGGCCTGGGTGGGGAATGATTTGAGCGCTGCGTCGCCGGTTTTGCATGTTAGATTTCTCTCTTGATTTGTTCGTGCAGGATAGGTTCTTTAGGCTTGTTTTTTTTTTCTTTTTTGATAGATTCCATAGTTCTGAAATACTAGTTTCTCGAGTGAGCTTTGGAGAATGGAGGTGATACAAATCTTGTATCTTTGTTTCGATTTGTTCTGTTTGCCTGAATACGGGTTGAACAGTTGAGGCTGAGTTAGTAGTAGGACAGATCATTCGTGTAATGTGTGCTGTGATGATCTTTTGATGCAGCAGGACGATGGGCGCTTCTGCAGCTACCGGTATGCAGATGGTGGCTGCACGCCCCTGCATCTCAGCCTCCCAGGGAATGCTTACTTCCAGGGCGGCGGTCTCCCGGATTGGCCGCGCACTCAGCACCACCACTGGCTTTGCAACCTGTCCCAGAATCTGCTACTCCAGCCCTCTTGGTTCTTCCAAGCGCAGCGGTGTCGCCATCAGAGCAATGTCAAGCGAAAGTGGCCCCCAAGGCCTACCAATTGATCTTAGAGGTAACTCTTAAGCTGCATATCTGTAGTAATCATGCACCTAGCAATGCTATGTGATCATGTTCTTTTCCTTTACGCATTCATGTTTCCGTGCAACATTTTGATTGCTTAGCTTCTATTTTCTCAATTTTTCTTTTGCATCTAACAAGCATAGATGCTCATGGCATACGTTGGTTTTTGGTTAACTATATGGTTGAAGCCAAATATTATTAACCCCGTCAGCTGTGGTGAATGTTTGAATGGTGTGTGCTTATTTAGTTCAAACCATCTAATTGTAAAAACTGCGTGCTTTATGGAATCTAGTATTTTACATTCTGGTCCTCGGGAAAAAGGTTACTGCTGTTTTGGTTATCTTTTATGGACGATCTAATGGTGATTCAGTAGTAATATTGCGTTTACTACTCTTTGATAATGCTGTAAGAGCCAGCCTCATACATCACCGTGTAGACTAACATATGAGCAATTACCAGTATACCAGGGAGCATATCCTGTGCAAATGAAAGTGTTTTAAATTCCATTTTTACTTGATGTAGATGCTTTAAATATTCTAAAGAAAAGCAAAAGTTGGGTTTGACATACTGTATATTCATGCTAAGGTAGGGTCTTGAAAATTTTGATGAGAAATATCAAGCTAAATTTCTTTTAATTATTTGAGAATTTTTTTTTAGAACTTATGTGCCTTTTGAAGGCCTCATTCATGAACTCTACATATTAAGGAAGTATCAACTTTATGTGCTTGCTCATTAAAAAAAGGTCAAATATAAATGCTTTCGTCAGCTGTAATGAAGTTTAGTGGCCCATAGCATTATCCAATGATTAACAGATGATCACAATTATACAGAATTTTGCATAGTAATTACAAGTATTTTGATTTGTTGTCATATTGCTTTTGTTATTGGTTTGATTGAAAAACTAAAGGAGAGATTTTTTTTTCAAAAAAACAGAGAACTCGAGCATATTAGTAGTACAAATCCTTCTCAATTGCTGCCACTCTTCTAATGTTTGTATGATCTCTCAGGTAAAAGGGCGTTCATTGCTGGAGTTGCTGATGACAATGGCTATGGCTGGGCAATTGCAAAGGCTCTTGCTGCTGCTGGTGCTGAAATTCTTGTTGGTACATGGGTGCCTGTAAGTGGATCCAACTCTTGCAGTGTTCAATAGGGATCATATTTTTTTTTTCCTCTTTGTCATTCACTTAATGGAGAGTTCTACCTGCACAGGCACTAAACATATTTGAGACAAGCCTAAGGCGTGGAAAGTTTGATGAATCACGAAAGTTTGTATTATATTTCTATTTTTCTTGTTTTATCTAGCTTTGCTCTGAAAATAACATTTAACTCTTATCTAACTATCTCTTGATACAGGCTGCCTGATGGATCTCTTATGGAAATTGTTAAAGTCTATCCACTTGATGCTGTCTATGATTCCCCTGAAGATGTTCCTGAAGATGTAATTTTCTTATCTATTATTTTCTTCTGTTTAGCTCCCAATGCGGCTTTATGACAATCATTTTTATTTTTAATTTTAGGTCAAAGGAAACAAAAGGTATGCTGGGTCATCAAATTGGACTGTTAAGGTGTGTAGATGCAATCCATTTCATTCCATATGTCTACCCAGTTGATATACTTGGGTGTGCAAAAACAACATTAGGCGCGTTATACAATTTCTATAATCGGATTGTTTTTTAAGCTTTTGAGCTTTGACTAAACTGCTCCTATTTTTATTTGATAGGAAGTTGCTGAGTCAGTCAAGAATGACTTTGGCAGCATTGACATTTTGGTGCATTCTCTAGCTAATGGTCCAGAGGTATAGTGCCTCTGCCTATATTCCTCTGTGCTTACTGCTAGTGATGAAATTATTGTCCATACGTGTTACGCTTTCAACTAATAATCACCTACCTCTGTTTGAAGGTAACAAAACCACTGTTGGAGACATCAAGAAGAGGGTATCTTGCTGCACTGTCAGCATCGAGTTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGGTAGTGCTTACTCCGCAGTTCTAACTCTCCACGCCTGCACTTGAACCGCTATCTTATACACTCCTAGATAAATCAAGCCGTTACTGCCTTTCATATCTTTGCAGTTTTATTTGTCCAGTGAATCATAGTAATGCTGCTGTTTACTTATGTGTAACTTGTCTCCTGCTCTGATCTGGATCAAGCTTTTCTGACTGAACAGCAATGCTGAAATTTATCCAATTGCATTAAGAAATAACTTGTTATGACGCTCAACCTATACTAACCTATACTATTTTCATTGGCACTGCCTCATATATGTTTAATATTTCCAGGTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCCTGGGTAACTACATTATTTGAGATTTAAAATACAAAGCATTTTGTATCATTACTTACCGGTGGTAATTCTGATTATATATATTTTTAGATATGGTGGTGGCATGAGTTCAGCTAAAGCAGCTCTTGAGAGTGACACAAAAGTATGGTCTTCTAGAATATATATGTTATTTTCAACACTCCCTCCATCCCAAAATAAGTGCAACCCTCTAGTTCAAATTTGAACTACAAGGCTGCACTTATTTTGGGACGGAGGGAGTATGTACCATGAATGTACTTTTTTAATCTTTTTCTGCAAATCTTTGTAGGTACTTGCTTTTGAAGCTGGAAGGAAAGGGAAAATCAGAGTTAACACCATATCTGCAGGTATTTTCTTCTGTAGGAATATTCTCTTGGAATAAAGCTAGCATTGTAAATCTTGGAACTAGGTGATTGCCTATGCGATACCATTTGGAAATTAATGACAAATGATGTAACATTTCTTTCTAATTTTACATGTGAATTTCGGTTTGTCAGCACATGCATATGATGTGCTATTTCCCTTGGATATGATTTGCATAATTATTTAGGATCTCTTACTTTAACGATGTAGGAATAATTGTGAGTTCATTCTGATTTATTAAATTTACTCATAGGTCCTTTGGGAAGCCGAGCTGCCAAGGCAATTGGATTCATTGAGAAGATGATAGAATACTCTTATGTTAATGCACCGTTGCAGAAAGAACTGTTGGCAGGTCCAAAACCGCCTTATTTCTCTGTTACGTATGCTTCTTGTTTTATTTAAAAGAACAACTTTTCATCCAGATATACTCTAACGAAAGCATTTTGTATGTCGAACAGACGAAGTGGGGAACACAGCAGCATTCCTGGTGTCTCCATTGGCTTCCGCTATCACTGGCTCGACTGTTTACGTTGACAATGGACTCAATACAATGGGGCTTGCAGTTGACAGCCCTACAATATCATCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028458

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028458&oldid=34715"