BGIOSGA028505

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Revision as of 07:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028505| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028505, complete gene.| tag = P0410E1...")
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Gene Name

BGIOSGA028505

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028505, complete gene.

LocusTag

P0410E11.122

Ensembl Transcript ID

BGIOSGA028505-TA

Ensembl Protein ID

BGIOSGA028505-PA

Length

4668

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:16738495..16743162

Sequence Coding Region

16738495..16738587,16738946..16739106,16739213..16739325,16739524..16739598,16739699..16739812
,16740053..16740120,16740213..16740296,16740422..16740475,16740561..16740641
,16740721..16740814,16740970..16741043,16741125..16741235,16741320..16741364
,16741449..16741505,16741588..16741692,16741766..16741882,16742178..16742281
,16742752..16742917,16743025..16743162

Genome Context

<gbrowseImage1> name=IndicaChromosome08:16738495..16743162 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:16738495..16743162 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGCCGACTTCGGCGCGCCCAAGGACCTCGCGGGGGGCCTCCAGCAGCGGAGGTCTCTCTACCAGCCCACCCTCCCTCCCTGCCTCCAGGGCGCAACGGTGAAGGTGGAGTATGGCGACGCCACCACCACCATCGACCCAACCTGCGCCAACGTCGTCGCGCAGGCCTTCCCCCGCACCTACGGCCAGCCGCTCGTCAGCTTCGTCGCGCCGCCGCCCGACGCCGTCGACAAGGACCGCGCCCCGATCAGGGTAGGGGTGGTGTTCTCCGGCAGGCAGTCGCCGGGAGGCCACAACGTGATCTGGGGACTCCACGACGCTCTCAAGGCTTACAATCCTCATAGTGTTCTCTATGGATTCGTCGGTGGCACTGAGGGACTGTTTGCGAACAAGACAATCGAGATCACGGATGATGTTCTTGCTTCATACAAGAACCAAGGTGGTTTTGATTTGCTCGGTAGAAGTATCGATCAGATCCGCAGCACTAAGCAAGTCAATGCCGCAATGACTACATGCAACAACCTCAACTTGGATGGCCTGGTCATCATCGGAGGAGTGACATCCAATTCAGATGCTGCACAGCTTGCAGAGGCCCTTGTCCAGAATAACTGTAAGACCAAGGTTGTCGGTGTGCCTGTTTCACTGAATGGTGATCTTAAGAACCAATTTGTTGAAACAACCGTGGGATTTGATACAGTGTGCAAGGTTAACTCTCAGCTTGTGAGCAATGTTTGCCTTGATGCAATCTCAGCTGGAAAGTACTACTATTTTGTCCGTCTGATGGGTAGAAAAGCATCTCACGTGGCCTTTGAATGTGCACTTCAATCACACCCAAACATGCTTATCTTAGCGGAGGAGGTAGCACTATCAAAACTCACACTGATGGAAGTTATTAACAAGATATGTGATGGAGTACAAGCAAGGGCAGAATTAGGGAAATTCCATGGTGTGCTCCTTATTCCAGAAGGACTAATAGAAAGCATTCCAGAAATGTATGCTCTGCTTCAGGAAATCAATATCCTCCACAACAACAATGTTCCTGTGGCAGAGATGCCATCACAACTGTCTCCTTGGGCAGCTGCGCTGTTCCAGTTCTTGCCACCCTTCATCAGAAGAGAGCTGCTGCTCCATCAAGAATCAGACAACTCTGCCCAGCTGTCCCAGATTGATACTGAGCAATTGTTGGCCCACTTAGTAGAAGCAGAAATGATAAAGAGAACAAAAGAAGGAAGATACAAGGGAAGGAAGTTCAGCTCTGTATGCCATTTCTTTGGATATCAGGCTCGAGGATCCGTCCCATCAAACTTTGACTGTGACTATGCTTATGCTCTTGGCCGTATCTCCTTGCATATGATAGCAGCTGGCTTGACTGGGTACATGGCAACTGTGGCTAATCTGAAGGACCCTGTAGACAAGTGGCGGTGTGCTGCTGCTCCTCTAACTGCAATGATGAGTGTGAAGAGGCATTTGCGTGGTCCTGGAGCAATCCCGATAGGAAAGCCTGCTATTCATCCTTCTCCAATTGACCTGAAAGGGAAGGCTTATGAGTTGCTGCGAGAGAAAGCATCAAGTTTTCTCCTTGATGATTTCTACAGGACTCCAGGAGGCATTCAATATGAAGGCCCGGGTTGCAATGCAAAACCCATCACATTGACCATTGAGAACCAAGACTACATGGGCGACATTGAGATACTGAAAGACTGTCTCAGCAAGGTGAGGACGATGGTGAAGCCTGGATGCTCGCGGGAGGTTCTGAAGGCGGCGATTAGCTCGATGCTGTCGGTGACCGACGTGCTGACGGTGATGTCGCACCCGCTCAACGCCGAGCTGCCGCTCTACCATTTCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPRTYGQPLVSFVAPPPDAVDKDRAPIRVGVVFSGRQSPGGHNVIWGLHDALKAYNPHSVLYGFVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNLNLDGLVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKVNSQLVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLMEVINKICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQLSPWAAALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGRKFSSVCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRCAAAPLTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPGGIQYEGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSVTDVLTVMSHPLNAELPLYHFN</aaseq>

Gene Sequence

<dnaseqindica>1..93#452..612#719..831#1030..1104#1205..1318#1559..1626#1719..1802#1928..1981#2067..2147#2227..2320#2476..2549#2631..2741#2826..2870#2955..3011#3094..3198#3272..3388#3684..3787#4258..4423#4531..4668#ATGAACGCCGACTTCGGCGCGCCCAAGGACCTCGCGGGGGGCCTCCAGCAGCGGAGGTCTCTCTACCAGCCCACCCTCCCTCCCTGCCTCCAGGTAACTCCTTTCATGCCCCTTCTCTTCTGTGTCCCTGTTTCTTGGTTTCTTGGGTTGGATTTAGTGCTGGTTACTCCATATGTGCTCGATTGCAAGCGGTTTTGGTGACAGACATGGGGGGAATGATCAGGGGGCTGCAATTTCAGCGACCGCTGTTCTTTGCCTTCGAATTTTCTGGCCAAGAGTGTTTGAACACTTGTTCTTTTGGTGAAGATTTGTTTGGATTTGAGTCTTTTTCACCTTCTTCCGAATTCCGTTGATGAAGATTCGTGGAGTTTCTGCCTGTAATTTGAAGATAAATGCACCAACAGACTTGATTATTTTTCACTGAAAAAAATTTCTGCTTCTTTCTTTTCAGGGCGCAACGGTGAAGGTGGAGTATGGCGACGCCACCACCACCATCGACCCAACCTGCGCCAACGTCGTCGCGCAGGCCTTCCCCCGCACCTACGGCCAGCCGCTCGTCAGCTTCGTCGCGCCGCCGCCCGACGCCGTCGACAAGGACCGCGCCCCGATCAGGTCCCAAACTCAAAACCCCCCCTTTGATCGATCCACCAGCCTCACTGATCTCTAACCATGGTCTCTCACTCACGCTCACACTCTCTCACTTGGGGGTTTGGTTCAGGGTAGGGGTGGTGTTCTCCGGCAGGCAGTCGCCGGGAGGCCACAACGTGATCTGGGGACTCCACGACGCTCTCAAGGCTTACAATCCTCATAGTGTTCTCTATGGATTCGTCGGTAATTGCACTCCTGATCTATAGATTTTTTTTTTTGGTGCACTAGCATGATGATATCACTGTGGTCTGTTGGATTTTGGATCTTCTCTATCAGCAGAGGAATATTCCAGTTCAGCCATAAGTTTGATTCTCTCTAAAAGTGGGGTTATGTCATATGGTTGCTGTTGATTAGCAGTAATAAGTTGTGGTTGTGGGTTAGGTGGCACTGAGGGACTGTTTGCGAACAAGACAATCGAGATCACGGATGATGTTCTTGCTTCATACAAGAACCAAGGTTGGTACACTTGTTTATTTATCTATTTATTTTCCTTGAAAGGTTACTTGCTTCTGTTGTTGTTAAGCATGATTCATATAAATGTTTGCTATTTTTTAAGGTGGTTTTGATTTGCTCGGTAGAAGTATCGATCAGATCCGCAGCACTAAGCAAGTCAATGCCGCAATGACTACATGCAACAACCTCAACTTGGATGGCCTGGTCATCATCGGAGGTACTAATAGGAGTAGTAGTCGTGATTGTTCATTTCTGATATAAGTAAATCGTATTTTAGCATGCTGATCATCAATGTTAAAATGTGCAAACCTTTTTGAATAATGTCATACATAGTATACCATGTCGTCAACCCTATTTGTTGAATAACACTAGTCTATGATGTGGTAATTCTGACTTACAAATTAAGCATGCATTTAATTATGTTAACTTTGTGCTCACACTTTATCTCTATCTCCAGGAGTGACATCCAATTCAGATGCTGCACAGCTTGCAGAGGCCCTTGTCCAGAATAACTGTAAGACCAAGGTATGCCCATATTAGTTTAAGATGTAATTTCAAACCCTCATTTTTTTTTTAAGAAAACCAAATTATCTCAGTAGCTTATGTATATCGAATAGGTTGTCGGTGTGCCTGTTTCACTGAATGGTGATCTTAAGAACCAATTTGTTGAAACAACCGTGGGATTTGATACAGTGTGCAAGGTAAGCATCGCTGGCTACTACCAATTTTCATTGAATAAATGGACTCTAAAGATACCTGTAAATGCTTCGGAGGTGGTATACCACGGTCTATCACTCATATATGTATGTAAATTCCACTTTTCCAGGTTAACTCTCAGCTTGTGAGCAATGTTTGCCTTGATGCAATCTCAGCTGGAAAGGTAATTGAAATACCGTCGAATTATATCAATGAGATCCCAATACCTTTTACTAAGACAACTTGGCTGATGTGTTGTTTCCTATTAGTACTACTATTTTGTCCGTCTGATGGGTAGAAAAGCATCTCACGTGGCCTTTGAATGTGCACTTCAATCACACCCAAACATGGTATGATTTGATCAAAATTATGGATAAAATTCTGCTGTGAGAAGAACAATACCGACATCTTTCTAACTTCTCAATGTAGCTTATCTTAGCGGAGGAGGTAGCACTATCAAAACTCACACTGATGGAAGTTATTAACAAGATATGTGATGGAGTACAAGCAAGGGCAGAATTAGGTCCGCTCAGTTCTTTGGTGGTTTGAATTTCAGAAAATTGTTGAATAACAGTGCACAGTTCTTTTGGGGGTTTGAACTTTGAAGTCTAGTTTGTTAATATTTGATATTTAGGATATTTTGATAGACTGATATGCTTTCTGGCAATTAATGCTCAGGGAAATTCCATGGTGTGCTCCTTATTCCAGAAGGACTAATAGAAAGCATTCCAGAAATGTATGCTCTGCTTCAGGTATGATTTGTTCCATCCACCTGACAAGATGAATGTCATAATTCTTTTTACACTTGGCTGATTTATGTTCAACTATTCCAGGAAATCAATATCCTCCACAACAACAATGTTCCTGTGGCAGAGATGCCATCACAACTGTCTCCTTGGGCAGCTGCGCTGTTCCAGTTCTTGCCACCCTTCATCAGAAGAGAGGTCTTGCATTTGTAGAATGTTGCGTTGATTGATACTTGTGACATTAACCTAAACTAAAACGTAGACTTCCTCTTTTTCATTCAGCTGCTGCTCCATCAAGAATCAGACAACTCTGCCCAGCTGTCCCAGGTGTGATTCTTGGTGCTCCATAAGCTACACATAGAAACTTATTTTTATGCAACAGTTGGCATCATAATGTCCTTGTCTTTCCAGATTGATACTGAGCAATTGTTGGCCCACTTAGTAGAAGCAGAAATGATAAAGAGAACAGTAAGTTCCCCACTGTTACTTTTTATTTGTCATTTATATTCTGGATTTGTTGCGCCTGATTCTATTTTGTGTTTTTTTTCAGAAAGAAGGAAGATACAAGGGAAGGAAGTTCAGCTCTGTATGCCATTTCTTTGGATATCAGGCTCGAGGATCCGTCCCATCAAACTTTGACTGTGACTATGCTTATGTAAGAATTGAACCTGTGTGTTTCAAATAGTTAGAGTGAACTAGTGACTAATACTCGAATATTGTTGCTGTAGGCTCTTGGCCGTATCTCCTTGCATATGATAGCAGCTGGCTTGACTGGGTACATGGCAACTGTGGCTAATCTGAAGGACCCTGTAGACAAGTGGCGGTGTGCTGCTGCTCCTCTAACTGTAAGATCTTGACTATTTGACCATTTCTTCTCCTATTAGATAAATCACGGTGTTTACCATTTCAAATGGGTCAATCTTTCACTTTTCCTGGATATACATCCTACCACTATCTTTGTTTGCCTGCTCCCCTGGCACTGGCAGTAACTGTGTTGGCAATAAGATTTTTTTTTTTAAGTTCTATTAAACGATATTATCTCATTGAAACTCTAGTGAAGATTACAATTTCAGATGCATGAATGCTATTATGTGTTAAGTACTTGTTACTGACAGAGTAACATGATATTGTCATTACTAGGCAATGATGAGTGTGAAGAGGCATTTGCGTGGTCCTGGAGCAATCCCGATAGGAAAGCCTGCTATTCATCCTTCTCCAATTGACCTGAAAGGGAAGGCTTATGAGTAAGTCGCGTGGTTAAGAGTTAAAAACTGCATTCCTTTCTTTTAGTGCTTTGATGCAACACAGAGTCTTAAGTTATTACACCCAACGTACTTGAAAAAACATTATGCTTGTGCATGTTTATTTTGTTCGAATTTGATTTGATGACAAACACATTATATTGATTATTTATGATACCAGTAATCAACGAAAAAAAAGGCATGAGAATATTTTTTAGCTTTCACATGATCTCAACATGGTGAGGCTCGAGAAATCAGTGCTGAACAAAATTAATGAATAAATTTAACAAACAAGCAAATCACATTGTTTTGCACTCAATACCTCAAATTAGCAAAAACTATTCACATTTACCCCCTAGTAAAACTTGTAGATCTACCCAATCTGATCAAGAGCTTCCTATTCCAAATTTACTCCCTAGTCATAATTGAGACCTATCTGATCAATAACTTGAATTGCTTCATGTTCTTCTCAGGTTGCTGCGAGAGAAAGCATCAAGTTTTCTCCTTGATGATTTCTACAGGACTCCAGGAGGCATTCAATATGAAGGCCCGGGTTGCAATGCAAAACCCATCACATTGACCATTGAGAACCAAGACTACATGGGCGACATTGAGATACTGAAAGACTGTCTCAGCAAGGTTCACTCTGAAACCCTGTGCATTTTCATGTCCCTCAGTAGTTTCAGATGCAACTTGTGCTAGAACTAGCCCTTCTAACAATAACATGCCTACTGTTGCACACCCAGGTGAGGACGATGGTGAAGCCTGGATGCTCGCGGGAGGTTCTGAAGGCGGCGATTAGCTCGATGCTGTCGGTGACCGACGTGCTGACGGTGATGTCGCACCCGCTCAACGCCGAGCTGCCGCTCTACCATTTCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028505