BGIOSGA028570

From RiceWiki
Revision as of 08:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028570| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028570, complete gene.| tag = OJ1705_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028570

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028570, complete gene.

LocusTag

OJ1705_C03.112

Ensembl Transcript ID

BGIOSGA028570-TA

Ensembl Protein ID

BGIOSGA028570-PA

Length

2902

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18906151..18909052

Sequence Coding Region

18906151..18906581,18907020..18907197,18907328..18907489,18908495..18909052

Genome Context

<gbrowseImage1> name=IndicaChromosome08:18906151..18909052 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:18906151..18909052 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCAGTGCAAGTCCCAGCTGAGCTCATCGGCAGCAGCAACGGCAGAGGAAGCGCGGGGGGGTCACTGACCGTGGACCCGGCGCTCGGCCGGCGGCAGGCGACTACGGCGGCGGCAGCGCTGCCGACGCCGAGGTCGCCGCCGCCGGCGTTCGGGAGCATCGTGGCGGTGCTGAGCATCGACGGCGGCGGCGTGCGCGGGATCATCCCGGGGACCATCCTGGCGTTCCTGGAGGAGAAGCTGCAGGAGCTGGACGGGCCGGCGGCGAGGGTGGCGGACTACTTCGACGTCATCGCCGGGACGAGCACGGGCGGGCTGGTGACGGCCATGCTCGCGGCGCCCGGCGCCGACGGCCGGCCGCTCTTCGCCGCCAAGGACATCGTCGACTTCTACCTCCGGCATAGCCCCAAGATATTCCCTCCTGTCATCAAAGGACCCCTGGGTTTGCTGAAGAGCATGATGGGTCCCAAGTACGACGGGCGATACCTCCGGTCCATTGTGCAGGAGCTGCTCGGTGACACCAGGATTAGCCAGGCCATCACCAACGTCGTCATCCCCACATTTGACATCAAGCTCCTCCAGCCCACCATCTTCTCTAGATTTGATGCACAGAAGGATGCATCCAAGAATGCTCTCTTGTCCGACGTGTGCATCAGCACGTCAGCGGCGCCGACCTACCTCCCCGGTCACCGTTTCGAGACCAAGGACAAGGCCGGTCAGCCCCGGGTCTTCAATCTCATCGATGGAGGTGTTGCTGCCAACAATCCGACGTTGGTGGCGATGACCCACGTGAGCAAGCAGATCCTGCTGGGGAACCAGGACTTCTTCCCGATCAAACCGGCCGACTACGGCAAGTTCATGGTGCTCTCCCTCGGCACCGGCTCGGCCAAGGTGGAGGGGAGGTCATTCGACGCCGACGAGTCTGGCCGGTGGGGCCTCCTCGGCTGGCTCCGCAACGACGGCGGCTCGGCGCCGCCTCTGATCGACAGCTTCGCGCAGTCCAGCTCCGACCTCGTCGACATCCACGCCTCCGTGCTCTTCCAGGCGCTCCGCTGCGACCGCCACTACCTCCGCATCCAGGACGATGACCTCACCGGCGACGCCGCTTCCGTCGACGTGGCCACGCCGGAGAACCTCCGCGCGCTCGCCGGCGCCGGGGCCGCGCTGCTGCGGAGGCAGGCGTGCAGGGTGGACGTGGAGACCGGCAGGAACGTGGCCGACGCCGGCAGGGGCACCAACGAGGAGGAGCTGGCGCGCTTCGCCCGGATGCTGTCGATGGAGCGCCGGGCGAGGCTCGGCAAGCAGGAGTCCACCCCTCGTGTATAA</cdnaseq>

Protein Sequence

<aaseq>MAPVQVPAELIGSSNGRGSAGGSLTVDPALGRRQATTAAAALPTPRSPPPAFGSIVAVLSIDGGGVRGIIPGTILAFLEEKLQELDGPAARVADYFDVIAGTSTGGLVTAMLAAPGADGRPLFAAKDIVDFYLRHSPKIFPPVIKGPLGLLKSMMGPKYDGRYLRSIVQELLGDTRISQAITNVVIPTFDIKLLQPTIFSRFDAQKDASKNALLSDVCISTSAAPTYLPGHRFETKDKAGQPRVFNLIDGGVAANNPTLVAMTHVSKQILLGNQDFFPIKPADYGKFMVLSLGTGSAKVEGRSFDADESGRWGLLGWLRNDGGSAPPLIDSFAQSSSDLVDIHASVLFQALRCDRHYLRIQDDDLTGDAASVDVATPENLRALAGAGAALLRRQACRVDVETGRNVADAGRGTNEEELARFARMLSMERRARLGKQESTPRV</aaseq>

Gene Sequence

<dnaseqindica>1..431#870..1047#1178..1339#2345..2902#ATGGCGCCAGTGCAAGTCCCAGCTGAGCTCATCGGCAGCAGCAACGGCAGAGGAAGCGCGGGGGGGTCACTGACCGTGGACCCGGCGCTCGGCCGGCGGCAGGCGACTACGGCGGCGGCAGCGCTGCCGACGCCGAGGTCGCCGCCGCCGGCGTTCGGGAGCATCGTGGCGGTGCTGAGCATCGACGGCGGCGGCGTGCGCGGGATCATCCCGGGGACCATCCTGGCGTTCCTGGAGGAGAAGCTGCAGGAGCTGGACGGGCCGGCGGCGAGGGTGGCGGACTACTTCGACGTCATCGCCGGGACGAGCACGGGCGGGCTGGTGACGGCCATGCTCGCGGCGCCCGGCGCCGACGGCCGGCCGCTCTTCGCCGCCAAGGACATCGTCGACTTCTACCTCCGGCATAGCCCCAAGATATTCCCTCCTGTCATGTACGTATACATTTATACGGTGTTTGTATTTACTTTTTTCTCGACCAAATTTTACATCCAACATTCTGTACTTTTATTTCTCGCCGTGAAAAAAAAGGGTACGTTAACTTAATTATGAAAATTAATGTAGTTAATTAGGTGAATCAGTCAGCGAGTTAACTTTAGTACAAGTTTTACTTAGAGCATAGATGAAACAGCAGATAATTAGATAAGCGTAAAGTGGTTTAAATTAGTTTTAAAAAGAAAGAAAATTGAATTTCACAACTTTATACTATAGTTGCCGCATTTTAATTCAGGCTATTTATCTGCAAGTTTAGTCGACTGGCAGTTAATTATTAAGATCATGTGAAAATACGTACAAATTTCAGTCACTTCTACACGGTTCTGATCATGCCAATTCATCCAGGCAAACCTTAATGTTCCCATGTATAAATGCAGCAAAGGACCCCTGGGTTTGCTGAAGAGCATGATGGGTCCCAAGTACGACGGGCGATACCTCCGGTCCATTGTGCAGGAGCTGCTCGGTGACACCAGGATTAGCCAGGCCATCACCAACGTCGTCATCCCCACATTTGACATCAAGCTCCTCCAGCCCACCATCTTCTCTAGATTTGATGTAAACTTATTACAATCCTTTTTGTAAGCTGTATAGTATATATACTATAGTGATGAAAAAGGACATCACTATATATTGTAAACAGAAGTAAAATTTACATGTGCATTTTATTATATCCATGTATGTCCAGGCACAGAAGGATGCATCCAAGAATGCTCTCTTGTCCGACGTGTGCATCAGCACGTCAGCGGCGCCGACCTACCTCCCCGGTCACCGTTTCGAGACCAAGGACAAGGCCGGTCAGCCCCGGGTCTTCAATCTCATCGATGGAGGTGTTGCTGCCAACAATCCGGTAAGCAATTCATTAATCCGTCCGTCAAAACCATTTTTCGGATTCGGATAGGTTTGATCGGAACTATTCGGAAATTCTCAGATTCGGAAACGAATTCGGTTTATTTTTCTCAGAAACGAAAACGAATACAGTATGGGTTTAATATCCGTCGGAATCGGAAAACGGTTGGAAACTATCCGGGAATTTCGTTCGGATATCCAAAGACATGGATCAAATTTTAGAAAAAACATATATATATACATAACTTTTTCATACGGAGTCAGATGAAGACAAACTTTTATATCAAAATTATAGTGCTCGATGAGATCTACAACTTTCTTGTTGACTATTTTTTTATTTGAGATTATTTTAGGGTCTAATGTTCATTATAACATACTACCATATCTATTTTTACAAAATCTCAGATATACAATTCAAACCACATATGAAGAATTTGTTTCGGGAGTGGATTTTGATCCCTCGAGGGGATGTGCCCACGTTGTTTGCATGTTATTCAAATGATTATGAAAAAAAGTTGAGAAGATGTATTAACATGTGATATATCACTCTACAAACATGCAAGTTCAAATTCAACTTCTACATCTCACAACCGAGAAAAATAAATTAAACTACAACTAGTTAACGAATATTCACAGTCAATTTTTTTCGTTGCGAGATGTAGAAATCGATTTTGAACTTGCATGTTTGTGGAGTTATATATCACATGTTAATACATCTTTTCAATTTTTTTTCTATAACCATTTGAGTGACATGTCCACAACGAGTGGACATCCCTCAAGGGATCCAAATAGTTTCCAGAGGTGTTCCATAATAAAAGTTGTAGAGTTCAATGAGATCTACCACTTTATAGTTTGTATCATTGGTATTTGAAAATGTTTAAAAATATAAAACAGACACTATAAGTTTCAGATCCAATTGTCTCAAATTTTTGATGAACAAAACACATCAACAGTAGGGTGATTTGTCTGATTTATATGTACTAAAAAGCTGTCGTTTCATGTGTAGACGTTGGTGGCGATGACCCACGTGAGCAAGCAGATCCTGCTGGGGAACCAGGACTTCTTCCCGATCAAACCGGCCGACTACGGCAAGTTCATGGTGCTCTCCCTCGGCACCGGCTCGGCCAAGGTGGAGGGGAGGTCATTCGACGCCGACGAGTCTGGCCGGTGGGGCCTCCTCGGCTGGCTCCGCAACGACGGCGGCTCGGCGCCGCCTCTGATCGACAGCTTCGCGCAGTCCAGCTCCGACCTCGTCGACATCCACGCCTCCGTGCTCTTCCAGGCGCTCCGCTGCGACCGCCACTACCTCCGCATCCAGGACGATGACCTCACCGGCGACGCCGCTTCCGTCGACGTGGCCACGCCGGAGAACCTCCGCGCGCTCGCCGGCGCCGGGGCCGCGCTGCTGCGGAGGCAGGCGTGCAGGGTGGACGTGGAGACCGGCAGGAACGTGGCCGACGCCGGCAGGGGCACCAACGAGGAGGAGCTGGCGCGCTTCGCCCGGATGCTGTCGATGGAGCGCCGGGCGAGGCTCGGCAAGCAGGAGTCCACCCCTCGTGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028570