BGIOSGA028602

From RiceWiki
Revision as of 08:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028602, complete gene.| tag = OsI_290...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028602, complete gene.

LocusTag

OsI_29098

Ensembl Transcript ID

BGIOSGA028602-TA

Ensembl Protein ID

BGIOSGA028602-PA

Length

3705

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19583407..19587111

Sequence Coding Region

19583407..19583649,19585094..19585510,19585837..19585914,19586049..19586201,19586287..19586395
,19586478..19586644,19586728..19587111

Genome Context

<gbrowseImage1> name=IndicaChromosome08:19583407..19587111 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:19583407..19587111 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCTGGCATGGTGGCGACAATGGTGCTACTGACGTGCCTTGCTGCAGGAGGGCTGGTCGTCGGAGCTGAGGAAGACGGTGGCGGCGGCGGTCTTGGCCGGCTGGGGTCGCCGGACTACGGCGACGCGCTGGCGAAGGCCATCCTGTTCTTCGAGGGACAGCGGTCGGGGCGGCTGCCGGCGAACCAGCGAGCGACGTGGCGCGGGGACTCGGCGCTCACCGATGGCCGTGAAGAAAACGTGAACCTGACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTACCCGATGGCGTTCACGGTGACCCTGCTGGGCTGGAGCGCCGTCGAGTACGGCGCCGCCGTCGCGGCGGCGGGGGAGCTCGGCAACCTCCGGGCGGCGATCCGGTGGGGCGCCGACTTCCTCCTCCGCGCCCACGCCTCGCCGACGACGCTCTACACCCAGGTCGGCGACGGCAACGCCGACCACCAGTGCTGGGAGCGGCCGGAGGACATGGACACGCCCAGGACGCTCTACAAGATCACCGCCGACTCGCCGGGGTCCGAGGCCGCCGCCGAGGCCTCGGCGGCGCTCGCCGCCGCGTACGTCGCGCTCAAGGACGACGGTGACACCGCCTTCTCGTCGCGGCTCCTGGCCGCGTCAAGATCGCTGTTCGATTTCGCCAACAACTACAGGGGATCATTCCAGTCCTCCTGCCCCTTCTACTGCTCCTACTCTGGATTTCAGGATGAGCTCCTCTGGGCCTCAGCGTGGCTCTTCAAGGCGACGCGAGACGCCAAGTACCTCGACTTCCTGACAAACAACCAAGGATCCAGCAACCCTGTCAATGAGTTCAGCTGGGACAACAAGTATGCCGGAGCACAGATGCTTGCAGCACAGGAGTACTTGGGAGGGAGAACACAGCTAGCAAGGTACAAGGATAACTTGGATTCCTTTGTATGTGCCCTCATGCCTAACAGTGGCAATGTGCAGATAAGGACCACTCCTGGCGGACTTCTGTTTACGCGCGATTCGGTCAATTTACAGTACACAACAACTGCGACCCTCGTTCTGTCCATCTACTCCAAGGTGCTCAAGTCTTCTGGCTCCAGTGGAGTTCGCTGTAGCGCTGCAACATTCTCTCCAAATCAGATCAGCTCATTTGCCACGTCTCAGGTGGATTACATCCTGGGGAAGAACCCTCTGGGCATGTCATACATGGTAGGGTTCAGCACAAAGTTTCCAAGGCGCATTCATCACCGTGGCTCGTCCATCCCGTCGATCAAAGTTCTCAGCAGGAAGGTCACCTGCAAGGAAGGGTTCTCATCATGGTTACCGACAAGCGACCCAAACCCTAACATCCATGTCGGAGCGATTGTCGGTGGACCAGATGGAAATGATCAGTTCAGTGACAACAGGGGGGATTCATCACACTCTGAGCCAGCCACATACATCAATGCAGCCTTTGTGGGTGCCTGTGCTGCTGCAATGGGGCAGAAGCAGGTGGTGAAGCTGGAGGAGCCTGCGGACAACTTAGAATCAATGGTATCAACTTACTAG</cdnaseq>

Protein Sequence

<aaseq>MAAGMVATMVLLTCLAAGGLVVGAEEDGGGGGLGRLGSPDYGDALAKAILFFEGQRSGRLPANQRATWRGDSALTDGREENVNLTGGYYDAGDNVKFGYPMAFTVTLLGWSAVEYGAAVAAAGELGNLRAAIRWGADFLLRAHASPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITADSPGSEAAAEASAALAAAYVALKDDGDTAFSSRLLAASRSLFDFANNYRGSFQSSCPFYCSYSGFQDELLWASAWLFKATRDAKYLDFLTNNQGSSNPVNEFSWDNKYAGAQMLAAQEYLGGRTQLARYKDNLDSFVCALMPNSGNVQIRTTPGGLLFTRDSVNLQYTTTATLVLSIYSKVLKSSGSSGVRCSAATFSPNQISSFATSQVDYILGKNPLGMSYMVGFSTKFPRRIHHRGSSIPSIKVLSRKVTCKEGFSSWLPTSDPNPNIHVGAIVGGPDGNDQFSDNRGDSSHSEPATYINAAFVGACAAAMGQKQVVKLEEPADNLESMVSTY</aaseq>

Gene Sequence

<dnaseqindica>1..243#1688..2104#2431..2508#2643..2795#2881..2989#3072..3238#3322..3705#ATGGCTGCTGGCATGGTGGCGACAATGGTGCTACTGACGTGCCTTGCTGCAGGAGGGCTGGTCGTCGGAGCTGAGGAAGACGGTGGCGGCGGCGGTCTTGGCCGGCTGGGGTCGCCGGACTACGGCGACGCGCTGGCGAAGGCCATCCTGTTCTTCGAGGGACAGCGGTCGGGGCGGCTGCCGGCGAACCAGCGAGCGACGTGGCGCGGGGACTCGGCGCTCACCGATGGCCGTGAAGAAAACGTATATATATTTACAGCCTTACAGATATAATTTGCATCGATCATTGCATTATACTACTATATATTTGCATGCGTTTTTCTTAATCCTGTTCTCTTATCGACGTAATGCATATAATATTAACGATGAAACAAATTATCGAGTACTAACTCCGTGTATTAAATATACGGCACGGTTTGACCTTTTTATAATTGTTTGACCATATATCTTATTTAACTGTTTTATACAAACATAAAAAGAAAGTAATGGGAAATGCTGCGTGTCAGGCGCCGAGCGGCCGAAAAAAAAATCGGACGCCTCGAACCACGTGCTGAGTATTTTAAATAGTTTTAAAACGATTTTTTTCCTAAACTAATTATCCAATCTACGATCCGATCACGCCGTTGTATTCGTTCAATTAAATCTTTATAACAAAACCACACATAATTATATTTCGATAAAATAATATTTTAGCTTTTTTATTGATATTTTTTTAGAATGCTGCATTTGGTTCTTTAGATGTTTCAACCAGTAGTTTTACGATGTTTCAACTAGTGTACTCGTGATGTTTCACTATATACGGATCAAATGTTGCAGTGGATTTTGATATTATAGAACGCATCGTTGCAACAAACCACTCACATAATTTGGAAATCCTCTATTAAGGAAATTTATTTCTTTTTTTTTCCACCAAAAATGTTTCACCTAGTGTACTCATAATGTTTCACTATATATAGATCTAATGTTGCAGTGAACTAAAACATTCCATTGCAACAAAAAAACCCACATATTTTGGAAACCCCCTATTACGGGAATTCGTTTCATTTTTTGTTCCACCGAAAAATGTTTCACCTAGTGTAGTTATAATGTTTCACTATGTATAGATCAAATGTTGCAGTGAACTAAAACATTCTTTCGCTATTTGCTGAAACATTGTTTTTATATAAGGTGAAACAACGCCCGATTTAAACGAATGAAACATTTTCGTTCTATTTAGTGCAACAATTCCGATATATCTAGTGGAACATCGTGTAACATTTAAAAATAATTCAATAATTAGGTAAAAAAAATTTCGTCGGAATATATCTATGTGTGATCTTATTTTGAAGATTTAATTGCAACGAATTTAATGGTGCAATCGGATCATGATTTGGATAAGTAATTTAAGAGAAAAATCAGTTTAAAGTAAGTTTGCATGTAAATCGGGCGCTAACGTCACTGACGTCAGCGTCCGATCTCACCCCCTCCTGATCGAGCGCTCGACCGGGAGTCGTGTCCGAAAGTAATGGTTCAAGAATATATAACAATAAATCAAACAAAAAATTATAACTTTTTTATAAATATTTAAAAAAATCAAATGACGTCATGTATTAAGAAAACGGAAGAAGCATTGATCAATGGAAAGAGTTCATATTATCTCTCCATGGATAAATATGATTTTGGTATGGATTAATTCAATGGTGGTCAGGTGAACCTGACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTACCCGATGGCGTTCACGGTGACCCTGCTGGGCTGGAGCGCCGTCGAGTACGGCGCCGCCGTCGCGGCGGCGGGGGAGCTCGGCAACCTCCGGGCGGCGATCCGGTGGGGCGCCGACTTCCTCCTCCGCGCCCACGCCTCGCCGACGACGCTCTACACCCAGGTCGGCGACGGCAACGCCGACCACCAGTGCTGGGAGCGGCCGGAGGACATGGACACGCCCAGGACGCTCTACAAGATCACCGCCGACTCGCCGGGGTCCGAGGCCGCCGCCGAGGCCTCGGCGGCGCTCGCCGCCGCGTACGTCGCGCTCAAGGACGACGGTGACACCGCCTTCTCGTCGCGGCTCCTGGCCGCGTCAAGATCGGTATGCGCCACTGACATGCATATATGCATCTTCATTTCCATCACAGCCACATATCTTGGTTTGAATGTTTAGCAAATTTTGACTGAATTTGAATATTTTTTGTTAAATTCAGATTTTTTTTTTGGATATTTGAAATTAGTATGTGCCATGATAGCATCTGAAATTCTGAATTAGCTAGTCTTGATTTGCATGTACAGTTTATGCAGTGAGCAAGCACAGTTAATTTCTGCAGGACAGCAGATGAGAATTAACTACCAAGCCATTTGATACTAGTTTGGACTATTAACTAGCTAATTAATTCGTTTTGACTTGATGAACACCATCAGCTGTTCGATTTCGCCAACAACTACAGGGGATCATTCCAGTCCTCCTGCCCCTTCTACTGCTCCTACTCTGGATTTCAGGTAAAAAAAAACACCATGCAAATAAACCATCACAACTCTTGAACTAACCTATCTGCAACAATTTATCAAAAACATCAGTGAGATCGTAAGAACTGCACTGACAGATATAATTTGGGGGAAAAAAAATCTTTCAGGATGAGCTCCTCTGGGCCTCAGCGTGGCTCTTCAAGGCGACGCGAGACGCCAAGTACCTCGACTTCCTGACAAACAACCAAGGATCCAGCAACCCTGTCAATGAGTTCAGCTGGGACAACAAGTATGCCGGAGCACAGATGCTTGCAGCACAGGTCAGACATCACAGTATCCACTGAATAATTGATCATTGCAGTGACCTTCAGATGAATCTCAAGTTCATGCCTCTGTGCCTTTCAGGAGTACTTGGGAGGGAGAACACAGCTAGCAAGGTACAAGGATAACTTGGATTCCTTTGTATGTGCCCTCATGCCTAACAGTGGCAATGTGCAGATAAGGACCACTCCTGGTACAAACCTGAACATGACGACATTGGTTCTGAATCCAGTAATGTTTCTGGGAAGGCATTTTTGACATGTTTCTGGATGTAGGCGGACTTCTGTTTACGCGCGATTCGGTCAATTTACAGTACACAACAACTGCGACCCTCGTTCTGTCCATCTACTCCAAGGTGCTCAAGTCTTCTGGCTCCAGTGGAGTTCGCTGTAGCGCTGCAACATTCTCTCCAAATCAGATCAGCTCATTTGCCACGTCTCAGGTAGGCTACAATAGAACTTTGACAAGTTTCAGGTTTTTGCCAAGATGGTACTGTTCAATATCTGGCACGCTTCATGTTTTCAGGTGGATTACATCCTGGGGAAGAACCCTCTGGGCATGTCATACATGGTAGGGTTCAGCACAAAGTTTCCAAGGCGCATTCATCACCGTGGCTCGTCCATCCCGTCGATCAAAGTTCTCAGCAGGAAGGTCACCTGCAAGGAAGGGTTCTCATCATGGTTACCGACAAGCGACCCAAACCCTAACATCCATGTCGGAGCGATTGTCGGTGGACCAGATGGAAATGATCAGTTCAGTGACAACAGGGGGGATTCATCACACTCTGAGCCAGCCACATACATCAATGCAGCCTTTGTGGGTGCCTGTGCTGCTGCAATGGGGCAGAAGCAGGTGGTGAAGCTGGAGGAGCCTGCGGACAACTTAGAATCAATGGTATCAACTTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028602