BGIOSGA028676

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Revision as of 08:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028676| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028676, complete gene.| tag = P0477F0...")
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Gene Name

BGIOSGA028676

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028676, complete gene.

LocusTag

P0477F03.129

Ensembl Transcript ID

BGIOSGA028676-TA

Ensembl Protein ID

BGIOSGA028676-PA

Length

4604

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:21404811..21409414

Sequence Coding Region

21404811..21405926,21406067..21406475,21408406..21408473,21408825..21409007,21409130..21409414

Genome Context

<gbrowseImage1> name=IndicaChromosome08:21404811..21409414 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:21404811..21409414 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGAGGCGAAGGAGGTGGCTGAGGCCGTGGCGAAGGAGGCGGCGCGGCAGGCGGTCGAGGCGATAGCGGCGGTGAATGCCGCGACCGATGCGGCGGCCGAGGCGGTGGCGGTGGGTAAGGCGGTGGCCGAGGCGATGGAGGTAGCGAAGGCCGCGTTCGAGGCGGCGATGAAGAAGGTGGCCGAGGCGCTGGCGGTGGCGAACGAGGTGATGGCGAAGGCGGCGCTCGAGGCGGCGGCGACGGAGGCGGCGGCGAAGGAGGTGGCCGAGGCGGTGGCGGTGCTGAAGGCGGCGCTCGAGGCGGCGGCGATGGAGGAGGCCGAGGCAGCGGCGGTGGCTAAGGCGGCGGCCGAGGCGGCTGAGGCGGTGGCGGTGGCGAAGGTCGCGGTCGAGGCGGCGGCGAAGGAGGCGGCCACGGCGGTGGCGGTGGCGAAGACGGCGTTCGAGGCGGCGGCCGCGAAGGGGGTGTCGGTAGCGAAGGCGTTGGCGAAGGAAGCGGCCGAGGTGGTGGCGATGGCGAAGGACCTGGTCGAGGCGGCGGCGAAGGAGGCGGCCGAGGCGGTGGCGGTGGCTAAGGCGGTGGCCGAGGCGGCTGAGGCGGTGGCGGTGCCGAAGGCGGCGCTCGAGGCGTCGATGGCGGTGGCGAAGGACCTGGCCGAGGCGGCAGCCAAGTGGGCGGCCGAGGCGAAGGCTGCCGCCGAGGCAGCGGCGGAAGCGAAGGCGACCGCCGAGGCAGCAGCGGTGGCCAATGCTGTAGCCAAGGCGGCGGCCGAGGCGGCAGCCGTGGCGGATGCAGCAGCCAAGGCGGCGGCGGCGGCAGCGGCTGAGGACGCCGCTGCGGCGACGCGGACCCAGCTTGGGCGGCTCGCCTTGGTGGTGGTGGGCTTCGCGTTCGCGCTCGGCGCGGTGTGGCTGGCCAGCGCGTTCAGGATCGCCAGCGCCGTGGACCACTGCCTCGCGGTGAAGGTCCACTGGTTGGCCGACCCCATGTGCCGCGACACGGTGGTGTTCGCGGCTCCCCTGGCCGTCGCCTCGCTGATCCTCATGGCCGCGGCCGTGCACCGACAGGTCAAGGCCGAGGCGGAGGCCGGCGCCCAGATCCGCGAGGCTGCTGGTGTAACCCACGACGTCCTCCCTGATCCCGAGCTGCAGCCGCCACTGCCGCCGCCACCGCAGCCGGCGGTTGCGCTGGCCTCTGGACTAGAGCGGCGCCTCCTCCTGTGTGGTTCAGATGAAGTAGTCATGCTCACCATCATCTCCATTTATCTATGCTGTGTCACCTTCATTCTTGTGGGTATGCTGCTCCGAATGTTTGGCGCTCTCTTCCTTGTGTACTACCCAGGTGATGAGCTCGAGATTGCTCTTCTCATGGGGGTTGGTTCAGGATTCAAGAACGTTGGCTACTTGTGGCTGGCTGTGGGGCATTTCTTTCTCATCATTCCTTACGCCGTGCTCAGGCTGAGGAGGTTCCTCAACCAGTTCGTGTCGATCTTCGTGATGCCCGTTGCCAACAGAGTATTGGATCAGCGGCAGTATCGGATCGCTGATCTAAATGCTGCCGCATTCCAGTTTGTCAGGCTTCTGGTCATTCTGAGTAGCTGCCGATGCTGCCATCGCCACTGCCTCCTCCTCGCGGATTCCCCCGCGTACTGTGCCTGCGCCAAGAGCAACTGCACGATAGCCGTCGCCTTCCTGGCCATGCTGGGCATGGCCGTGTGCGCGGAGGTCAAGGCCGACGCGGAGGAAGAAGCCCAGATCATCCGCGTGGCTGCGGGTTTATGCCGCCCCGACGTCGCCCTGCCCGCCGGACCAGACCACCTCGGCCGCCGTGGTTGCGATGCAGCAGTCGTGTTCTTCATCAGCGCTATGTACCCGTACTGCATCGCATTCATTCTGATGGGTAAGCTTCTTCGAACGATTGGCGTTTTCGGCCGTGTCCCAGGTGGTGGTGGTGATGAGGGGATTACTCGTCTCATGAACCTTGGTTCGGACTTCGAGAACATGGGCTACCTGTGGCTGGCTCTCGGGCATCTCTTTCTTGTCGCTCCTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAEAKEVAEAVAKEAARQAVEAIAAVNAATDAAAEAVAVGKAVAEAMEVAKAAFEAAMKKVAEALAVANEVMAKAALEAAATEAAAKEVAEAVAVLKAALEAAAMEEAEAAAVAKAAAEAAEAVAVAKVAVEAAAKEAATAVAVAKTAFEAAAAKGVSVAKALAKEAAEVVAMAKDLVEAAAKEAAEAVAVAKAVAEAAEAVAVPKAALEASMAVAKDLAEAAAKWAAEAKAAAEAAAEAKATAEAAAVANAVAKAAAEAAAVADAAAKAAAAAAAEDAAAATRTQLGRLALVVVGFAFALGAVWLASAFRIASAVDHCLAVKVHWLADPMCRDTVVFAAPLAVASLILMAAAVHRQVKAEAEAGAQIREAAGVTHDVLPDPELQPPLPPPPQPAVALASGLERRLLLCGSDEVVMLTIISIYLCCVTFILVGMLLRMFGALFLVYYPGDELEIALLMGVGSGFKNVGYLWLAVGHFFLIIPYAVLRLRRFLNQFVSIFVMPVANRVLDQRQYRIADLNAAAFQFVRLLVILSSCRCCHRHCLLLADSPAYCACAKSNCTIAVAFLAMLGMAVCAEVKADAEEEAQIIRVAAGLCRPDVALPAGPDHLGRRGCDAAVVFFISAMYPYCIAFILMGKLLRTIGVFGRVPGGGGDEGITRLMNLGSDFENMGYLWLALGHLFLVAP</aaseq>

Gene Sequence

<dnaseqindica>1..1116#1257..1665#3596..3663#4015..4197#4320..4604#ATGGCGGCGGCGGAGGCGAAGGAGGTGGCTGAGGCCGTGGCGAAGGAGGCGGCGCGGCAGGCGGTCGAGGCGATAGCGGCGGTGAATGCCGCGACCGATGCGGCGGCCGAGGCGGTGGCGGTGGGTAAGGCGGTGGCCGAGGCGATGGAGGTAGCGAAGGCCGCGTTCGAGGCGGCGATGAAGAAGGTGGCCGAGGCGCTGGCGGTGGCGAACGAGGTGATGGCGAAGGCGGCGCTCGAGGCGGCGGCGACGGAGGCGGCGGCGAAGGAGGTGGCCGAGGCGGTGGCGGTGCTGAAGGCGGCGCTCGAGGCGGCGGCGATGGAGGAGGCCGAGGCAGCGGCGGTGGCTAAGGCGGCGGCCGAGGCGGCTGAGGCGGTGGCGGTGGCGAAGGTCGCGGTCGAGGCGGCGGCGAAGGAGGCGGCCACGGCGGTGGCGGTGGCGAAGACGGCGTTCGAGGCGGCGGCCGCGAAGGGGGTGTCGGTAGCGAAGGCGTTGGCGAAGGAAGCGGCCGAGGTGGTGGCGATGGCGAAGGACCTGGTCGAGGCGGCGGCGAAGGAGGCGGCCGAGGCGGTGGCGGTGGCTAAGGCGGTGGCCGAGGCGGCTGAGGCGGTGGCGGTGCCGAAGGCGGCGCTCGAGGCGTCGATGGCGGTGGCGAAGGACCTGGCCGAGGCGGCAGCCAAGTGGGCGGCCGAGGCGAAGGCTGCCGCCGAGGCAGCGGCGGAAGCGAAGGCGACCGCCGAGGCAGCAGCGGTGGCCAATGCTGTAGCCAAGGCGGCGGCCGAGGCGGCAGCCGTGGCGGATGCAGCAGCCAAGGCGGCGGCGGCGGCAGCGGCTGAGGACGCCGCTGCGGCGACGCGGACCCAGCTTGGGCGGCTCGCCTTGGTGGTGGTGGGCTTCGCGTTCGCGCTCGGCGCGGTGTGGCTGGCCAGCGCGTTCAGGATCGCCAGCGCCGTGGACCACTGCCTCGCGGTGAAGGTCCACTGGTTGGCCGACCCCATGTGCCGCGACACGGTGGTGTTCGCGGCTCCCCTGGCCGTCGCCTCGCTGATCCTCATGGCCGCGGCCGTGCACCGACAGGTCAAGGCCGAGGCGGAGGCCGGCGCCCAGATCCGCGAGGTATTAAGTACTCCTCCATAGCTAGTGAACTTGCATTCACCCGGCGAAATTTGATTAGTTGCTTCGATTTATCCACAGCATTTGCTTCTGTGCGTTGTCTGATCCACGAAATTTGATCGATTTTGCTCTCGTGATGGTAGGCTGCTGGTGTAACCCACGACGTCCTCCCTGATCCCGAGCTGCAGCCGCCACTGCCGCCGCCACCGCAGCCGGCGGTTGCGCTGGCCTCTGGACTAGAGCGGCGCCTCCTCCTGTGTGGTTCAGATGAAGTAGTCATGCTCACCATCATCTCCATTTATCTATGCTGTGTCACCTTCATTCTTGTGGGTATGCTGCTCCGAATGTTTGGCGCTCTCTTCCTTGTGTACTACCCAGGTGATGAGCTCGAGATTGCTCTTCTCATGGGGGTTGGTTCAGGATTCAAGAACGTTGGCTACTTGTGGCTGGCTGTGGGGCATTTCTTTCTCATCATTCCTTACGCCGTGCTCAGGCTGAGGAGGTTCCTCAACCAGTTCGTGTCGATCTTCGTGATGCCCGTTGCCAACAGAGGTAACTAATGTTGTTATGCTGTTTGTACGTGTGTTGCCATGTTGGGGTGCTCATGCATTTGTTAACTTTGTCTAGTGTGCATGGCCATCTTTAATACTCCCTCCATCTACTTTTGATATTCATATTTCATCTTGACACACAGACCAATGGATAAGTAATTCTATTTATCATCCATTTAAACATGCTACTAGTCATTCCTCGTAAACAAACGATTCATTAATATTTACATTTCTCGATGCCCATGTAGCCATTCTTGTGTGGAAGAATGGAGAGTCACGCATTAAATCCGAGGAATCATTAAGATGATAGGTCGTTGGATTGAAATATGCCTATCAAAAATAAAATTTTCAGATTTGGAAATATAACTATCAAAAGTAGATGGATGGAGTACTTCATTTCATTTAATATCAAAAGGGCATTTATTTGGGTTCTATACGTTATATGTGGATGTTGTGTTCCCTAGCATAGAATTGAATGGTAACTATAGTGATTGATGCTAATTTCTCACAACTGGTATGGTCAATTCCAAGTCTTCCACCGTTTGATTGTTTGCTAGCCCTTTCTTGAGCTAAATGTAGTATAACTCTCTTAGTCACCAGCTATCATGGTTACCGTGGAACTCCATTAGCACAATTGGATGACACATCTGGTTATCTTATTGTGCTGGATTGTGAGTACCAGTTAATTGTTTCAATTACCTGGCTCTTTGTCGAGATAATACTTTCCTCCATATATAGCTTAGTAAACTTGGTCATTCTCATGCCGAAAAGCTTTGTTTCATTTTCAAGTATTTTGTCCTTGTGCCTTTTCGCTCGTCCCAATCTGTTTTATTTCAATTAATCCAAGGTTTGAGTCATGAATCTTCTAATTTGCCAAGCTAATATATTCTATCCAACTATTGGAAGAGCTAACCCATAAAGCAAGGACCTTTTTTTTATTTGATGATTTACATGTTTGTTTTCTTCTTATATATTAAAATCTAGTCATATTTCATTGTATACGTAGCCACATCAATGTAGGGAGTCAATTTCAAGTAGCTACTAGTGACAGTAGCTTAGCTCACATTCAACAACATTGTGTTGCCGATGCTGATTGCTTTCTGGCTAATATTTGTATCTAGGTAGGAGTATATGTTGTGCAAGGACTACATTTCTTATCGCGTGTATCCCATTGCTAAATGCCGTGTTTTGTAGATTATGTTGAGCTTGAGCATGCTTTGTTCTTGTGATATTCGTCTGTTCCCTTACAGGGGAATCAGGACAATTGAAATATGACTGTTGAGCAGTCAAATACTCAAATGGTTGAAATTCACCTTTTTTTCTACCCAGTTTGTTGCACAGCTACCACTCTAGCAGGGTGTTTTTTCAGATACCGTTCTGTTTAAATAACGATGACCTCTCATAATGCTGGCTTTTTGGATACGCAGGATCAAGCCCAGTTTTGAACCAGTGAATTTGAGTGAGAGGGAGATTTGACACTACAACATACAGATACATATTTTGGACTAAAGCAAAAATTCAAGTATTCAAGGTTGCAGCTCAGAAGTTAATTTACTCGATTGTGCTAGGGTCGTCGTAGCCTCGTAGGATATGACTAGCTTTATATGATGCTCACGTTTTGATAGACTTGTTTGTGAATTCTTCGGGCAAGTATGTCCTAACGTACCTCTACTAGTCCTGATACTGAATGCATGGAACTGAATGTAGCAATGTTCTTGAATCTAGTACTACTATGTAGGCATATAGCTCAAGCTCCGTAAGATTCGTGCTGCGGCTGTCAGCATTTTCTTGGGATGCTCTGTTTTGCTGTGCATAAATCCCTCGTTATAATGCTTGCTCTTGTCGGATATATATGGTTATGGCCTTCATAATTGGCGTATTATTATTAGAGATGTTGCAAATTAACTACTGCGTGATGTGCTAGGCGGCAGTATTGGATCAGCGGCAGTATCGGATCGCTGATCTAAATGCTGCCGCATTCCAGTTTGTCAGGCTTCTGGTATGCCGAATTGGATTATCGTTGCAATGCCGAAACAAATGAAAACTACTCCGTACTTGATATTAGAGTATCTAAAAAATTGCCACAATTTTAAGTGATTTAGATGTAATTTTGAAGTGTAACTAGACTGTAATCGTATTGTATTGTAATTACGATATAACTTATATTCAACTTAATTATTTTGGTTGGTTAATATTGGGATATTACGTGTGATAAATTTCTTTCTAGTAATTTTTTCATTCATGCTTAAATATTGAGGTGATCATCTGAATGTTTTGGGAGAAAAAAACTTACGAAAGTTTTTTTAACAGTTCGGTATACGTGTCTATCTTATCCGGCATCCACTGTCAGGTCATTCTGAGTAGCTGCCGATGCTGCCATCGCCACTGCCTCCTCCTCGCGGATTCCCCCGCGTACTGTGCCTGCGCCAAGAGCAACTGCACGATAGCCGTCGCCTTCCTGGCCATGCTGGGCATGGCCGTGTGCGCGGAGGTCAAGGCCGACGCGGAGGAAGAAGCCCAGATCATCCGCGTGGTAGTAGCAAGCAGCCAGAGCCGCCATTTGTCATTTGTGTGTGTTGTAGCTAAGTAGTAGATCTGTGCGCGAGAGAATCTGATTGGCTTTTTTTTTTTGTTCCTCTCGTGTGTTGTTGGTAGGCTGCGGGTTTATGCCGCCCCGACGTCGCCCTGCCCGCCGGACCAGACCACCTCGGCCGCCGTGGTTGCGATGCAGCAGTCGTGTTCTTCATCAGCGCTATGTACCCGTACTGCATCGCATTCATTCTGATGGGTAAGCTTCTTCGAACGATTGGCGTTTTCGGCCGTGTCCCAGGTGGTGGTGGTGATGAGGGGATTACTCGTCTCATGAACCTTGGTTCGGACTTCGAGAACATGGGCTACCTGTGGCTGGCTCTCGGGCATCTCTTTCTTGTCGCTCCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028676