BGIOSGA028716

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Revision as of 08:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028716| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028716, complete gene.| tag = OJ1111_...")
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Gene Name

BGIOSGA028716

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028716, complete gene.

LocusTag

OJ1111_B08.19

Ensembl Transcript ID

BGIOSGA028716-TA

Ensembl Protein ID

BGIOSGA028716-PA

Length

6291

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22219866..22226156

Sequence Coding Region

22219866..22219958,22221761..22221816,22226051..22226156

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22219866..22226156 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22219866..22226156 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCCCTCTTCTCCGCCCGCCTGATCTAGGGTTTTACTGGAGCCGCCGCGCGCAGCGACCAGCCGACCACGGACGAGGACGAGGGGATCAGATATGCAATTGGGGGCAGCAAGCTAGAGGTGGCAACTGCATAATTTGCAAGAAATTGTTGGCTGAAGATCATACCGATGATATTCTTGCAAGTTATGCAGTTGCTGCCTCAAGCTTGCTGCCTCCTGTTGCCAAAGCTAGTAAAATGAAAACATTAAATTAG</cdnaseq>

Protein Sequence

<aaseq>MPPLLRPPDLGFYWSRRAQRPADHGRGRGDQICNWGQQARGGNCIICKKLLAEDHTDDILASYAVAASSLLPPVAKASKMKTLN</aaseq>

Gene Sequence

<dnaseqindica>1..93#1896..1951#6186..6291#ATGCCCCCTCTTCTCCGCCCGCCTGATCTAGGGTTTTACTGGAGCCGCCGCGCGCAGCGACCAGCCGACCACGGACGAGGACGAGGGGATCAGGTGAGCCCGCCGCCACTCTCTCCCCCACCCCTCCGAACCCGTTCAATTCAGCTCCCCGCGGATGTGATCTTGGTTAGGGGCTAGGGTTGGGTCGGTTAACGAAGATCGGTTCCGCGTCTCATCGTGGCGTGTGTCTTCGCGTGTGTGTGTTGGGTTGGGGGGAGTCCGCGCATGCGTTGTGTGGGTTTTTTTTTTTCAATGCTGGATGCGATTGAAATTGAGCAGAATGCCCAGTTTACTCATTCAGACCGAATGAGCTTCATTTACTCATTCATCTAGTGTTGGTGTTGGAAGTTTTGAAGACCTGAGTATGCGGTGGCTATATAATGTTTTTGTTGCAGATCAGTTAGCTTTGCTGGTTGGACAAATCGAGTCCTAGATATCTTGGATTTTTCTTTTTTCCATAGCAGAAGGTTGTGGGTAAAGATGGTGCAAGACAACATGGAATATAAAAGGCCATTGTATTCATGCTGGCTGAATAAAATTACTAGTTTCTCGCACACATTATCCAATGGACTCTGTTTTTTCATTGTGCATAGGCGAAGGGGGTTATGTTGTTTAAATAAAGCATTAGGGCACCATTATATTTCCATATGCACGGACTATTTCTCATTATATATTCTATAATTGACACTAAACCAGTAGGGTCTGAAAAGGTCATATAAGCTTAGCTGTGAGTAGCTCAGATATTCTTTTCCTATTTATTTTGGCTGAACAAATTTAACAATTTTAGCTAATATTCGTTTGCATATATCTTAGATGCAAAAAAAAGATATGCCTTGATGCAAAATTTAGTCGCTTTTGCTTGCATCGTGTAGATTTATTGCTATTGTGCCCCTATGCTCTGGCCTCCAGGCTTACTCACGACAGGTGATGGAACTACCAACATCTGTAGCTTTCCACCCATGCAGTCTTGTGCCAGGCTGGTTGCATGCTTTAGCTGTTTTGCATGTGTCGTCTGTCCTATTTTTGTTTTCTTGATGTCAGTTGACCAATGGAAAATCTTATGAGTATAGGATTAAACAATGGTCTAAAAGTTGGTGCTAGGTACTGGGTAGCCACTGTAATTTGGCATTTGAGGGTGCATTAGGTGCTTCCCTGCCTTGGGGGCTCTATATTGCTATGTAATGTTATATTGTCTTCTTTCATGTCATATGCTTCCCAACTGCTTGAAACTCCATAGTCAAGTTTGTTCTAGGCAGTAGGCACCGCCTAGTTGACATCTAGGTGCTAGGTGCCAGCCTTGCTGACCCTCTAGCGCCTAGCGGCTTCTTGAACCAATAGTATTAAAGTGAATAAGTGTTTTAGCATTTGTTTTGGAAGATATAGCTTTACTACGGGGTATGAATACCATTATCCCAAAGAGTTGATTGCATTTTTCAAATTTTTTTAGATGATTGATCTGTAATTTTCCTGGTTGATCATGATATTCTTTACATTGCACATGCCATGATATAGATTTGAATGTTCCCAACCAATTAGTTAATTGCACTGCCATCCTGTCCTATGAGAAGTTGAAAATACTGGCTGTATATGACTAATAAGCACTTGATTGAGTTCTTCCCTCTGTTATTTCCTTTGGTATGTCTTAGAGGTAGATCTATAGGGTGCTTTTATGCTATTCTCATATCACCAAACCAAAAATTCTGCGCATTCTTACTGGATAACACTAAACAGATAACATGTCAACCACTTTTGCAGAGAAAATTATGTCTGTGACACGAGCAAGCATTAAAAGTATCACATGTACTTTTGCTGTAGTTGATATATGACGGAACTAACCTTTTAATTGTTCTGATTAGATATGCAATTGGGGGCAGCAAGCTAGAGGTGGCAACTGCATAATTTGCAAGAAATTGTAAGTTCTCTTGGAAAATTCTGAAATGACATGTATTCATAATTTTATTGATGCTTTAGTTCTTTCTAGATGGAACCCACTTAGCGTGATTATTGCTATAAAGAAGCCACCACATGAAGCGACATCGTCAATTTTTCACACAGATGGTCCCTAAATGCGTAATTTCTTCCCGCACAAACCATTTTCTTGCTCTAGGATTAGGAACTTTTCTGTGAGACGACTGTCAATCCACATATCGCAACCACAGTGCACATATCGATGCCCCACATCAATGCGCAAAGATTTATCTAGTTACAGCATCAGTACAAACCACCATACACGCATACCAGTGAGGCAACCAAAATCAAATATATGTTTTAGGCATTAATCTTATTGGTTGGAACTATTTTTCTTGTTCAATCTTGTTGAAGTACATGGTTCTAGTTGCTGTAGCTATATAATAACTTAGCTGTTGGTAAAATAATGTTCTTGTGACTTGTGAGAGGTGATTATTCAATGGCAGCCTTGATTCCAGGATCTGTTACGGACACCAAATTTTGAGCTAAGTGCATAAGCAACTTTTCTCGTATTTAAACTGCACTTGAAAGAGGAACCCTTTTAAGTTAATACTCCCCCGGTCAAAAGTATTTGTCGTTTAGGACAAGATTTGGTCAAAATTTTAAAATTCCAACAACCAATTTTATGTTAGAATAAATGTATAAAATCTAATAAGTTTATGATATTACAATAGTACTTTTCGAGGCAAATTTATGTATATAATTTCTTTTATTTTTAAACTAAGCATTTAAGAAACCAATGATGGTTGGAATTTTTAAAGTTTGATCAAATCTTGGTCTAAACAACAAATATTTTGACCGGAGGTAGTATTAACGTTAAAAAATTAATATGAAGTAGCTTCATGGTACTTGGAAACAGAATATAGAATGTAAGTTCTATATGTTTTCTATAGGGACTATCTATATTTATGGCACCATATGAAAAAATAGTTAAATGTTTTAGCATGTACTATTTACACCGTAAATTTCATATCTTGGTCCATATATTTACACTGTAAATTACAACTTACACTGTAACTTAAAACTTACACAGTAATTTTCTCTAATACTTACATATATACAATAACTAGAAAGTACTAGTGCAAACTTACATTAAAAGGTGATGGATCCAAAACAAGTAGCAAAAGGGCACCAATTTCAATCATCCAGATGCATGGTGAACCTAAGCTGCATGTGAACCTAATCATATTGGCATGAACGTCCAGATGCATGGTGCCATAGGCTCAAGGCAAAAACGAGCGGTAGAACTACGACTGAAAACAGACCAAAACAGAAATATAGCAAAATCGTTTTCTATATATTTATTCTCCATATGTAAGATCATTGGGGGTGCCAAGTTACCCACTATCCCAATTCCGCATCCTTGGTCACGTGGGTGGCTCATTTGTGAACTTCTAATGTATCACTGGATATTATTCTGCTGTTTAGCATTTTAGATCATCGGCAATTTCCTTATATTCCAAGCAGCTTCATTGCATTTCAAAAGTAACCACATGCATCTACCAAGTTCAAATCAATACAAGATCAAGTGCCTATGTTTGGCGCGATACAAATAAGTGCTGTGCACTCTCTGCCCTGCATTATTTTGAACCACAAGAACTACATAGTCTTCAGAACAGCAGAATACATGACATAAACTCTGTTCTGGTTGAATGGGTTCCCAGCAACTTGAACAAAAAACTGAACTAAACTGATAAATTGTTCATGCAGAAAATATTGCATGGGTAATGCTTTGAAGTTTAGCTTCGAGGTTTTATAGTGACACCAAAGAAAATATGCCATTAGTCACTTAATCTTAGCGTTCGCCATCCTCACTTGGGCTGAAGTCTGCTGCAATTTGAATAAACTTTTAACAATGTGTTGTAATGTGTGTCTTGGTATCTGAATTTAAAATAACAAGAACTCACCCTGGATTTGGTGTTCCTGACTACTCCTTTTCTACATTCTCTGGCAGACTTAGCTCAAGATTAGGGCCAATTTCATTATCTGTAATCAGAAAGCTGTGCTGGATGGTAGAACCTGTTGGATGCCCATTACTCTTTGTCTTATATACCTGCTAAAATAAATAAAAAAATGACATTTTGTAATTTGCATACACCAGAAAAGTGAATTGAGAAAATATCACTTGTAGAATCTGCATCATTGTTTGGCAAAATGTTTCTGCATGCCTCAACCTTTTTCTGTAAATTGATGTTTTCTTGATGGACAAGGCTGACTTTCTTGTGTAGTTCCATGTTTTCCTGATGTATGAGGCTTCCCTACAATTCAGTGAGAAGTTTGTGCAGTGTCAAGCAAATTATCTCACTCCAATAAGATTTGGACCAAGTAGACTAGTGTACATAAGTAATGTTGAGTGAATGTGCTAAGTGGTAACAACCTTCCTGCTTAATTCTTGAATTTGATCCATCATGACATTGTCCTGTAAAGTGAATGTTAGTCAAAGTAGTTATTGATATTATGTCAAGGAAGAATTAGAAGTGGATGGACTGTTAACAAATTGTAATTTAACCTTCCTCAGACGGATATTTTTTAAGCTCATCTCCAGCTTACTTTCCAAATTTTGCAAGTCTTCTACATCCAGACCAGAAAGCTGTTGTCCCAACAACTGTCTGCAATATCACGTTATGCACAGTCATTATTTGAATGCTACTCCCTTCATCCTAAAATAAACCAACTTCTAGAGTTCAAACTTTGTCCCAAAATAAATCAGTTCCTACCATCTTACCTACCAGCGATTCTCAAATTGAGAAATTTTATCCCTTCAATACCCTTTACCTACCCAATGACCAACTCATTTACCTCCACATTGGGATGCTAGGAGCTTTTTTTTTTTTTTTGGGGGGGGGGGTGGGGGGGAGCACAGGGAGTAAATGTTATCGCACTTGTTATAAACCTTTTGTTCAATTTTTAGTTTTTTACACGCACACTGTTTTTAATGTCGTTAGATGCGAATATTCATATACCTGAATTTAGACCTAGAAATTAAATTGCTATGACCAAAAACCCAAATGTCCTGGCACCTGCTACCATGATGCTGAGAAACGTATATATAGTTTATAAGATGCTTCTTAGTTTATCTTTGCAGAATCTGATTATCAAATCATACAGGTTAACTGAACTAACCATATTATCTAAAATTCTGTGTGCAAGGACACCACTTTAATCAAGTGAAATGGACAATATCATTACTTTTCACTCCAGTATTTTGTAAGGTTGTTTGTCCAAATATTGTATGCTAGCAACACCACTAATTTGGCCATCAAGGCATCAGCTATCTATGGTGACAAGTTTAGAATTAAGCATGTACTAGGAGTATTACTAAATGGGGAGAAGCATCAAACATATATAATTTATGTCAGTATCTCAAGTGATCTATTCAGCTCCTGATTATCAAATAATATAGGTTAACTGAACTAACACGTTATATTCAATTTCGTCTGTAAGGACACCCACTTTAATCAAGTAAGAAATGGGAACAGATAATTGCTTATTAGTGTGTTTGAAGGTTGTTTATCCAATACCATATGTTAACAGTGCCACTAATTAACCATTTGCTATCTTGAGTGATAGGAAAGGCAAAGCATGTCCTAAGGGTGTTACTATCAGTGATTATGGAACAACTAGTGCAACTTGAGTTTCTTTGTTTTTATTGCTTGACTTGAGGACATTATATAAGTCTCAGTCTGTATACCTGAAGACACGACCGAAACCTCCAAATTTCGTTTTTGGTAATATTGGTCTTATATGGTGCATAGCACAGTAGATGCCTAGAGAGCCATAATGTATAGTTATAGTTCATGGTTACACTGATAGTTGTTTCATAGTGAAACCATGTACTCCCCTCTTTCAAAATATAAGGCTTATTTTGAGTGGGCACAAGAATTGGGAAGAGTATAAAACCAAGAGAAAGTGGAGTTAAATATGAACATACACTCAAATATCTCAGGAATAGGGAGAAGATGAGTAGTGAGATGGGAATAATACGGAGACAATTTATTTTTTTTAATGTTCTGTTTAATTTTTGGTACCTAAAACTTGTTTAATGGTTCTCAAGTGAATCATATGCACTAGCATACTAGAAAACAATGAAAGACACAGTCCTCATTATTTATTTACTTTTATCAATTTATCAATTATTCAAATTCATAGAACTCATGCACATTTATGATTTATTGTAGGTTGGCTGAAGATCATACCGATGATATTCTTGCAAGTTATGCAGTTGCTGCCTCAAGCTTGCTGCCTCCTGTTGCCAAAGCTAGTAAAATGAAAACATTAAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028716