BGIOSGA028754

From RiceWiki
Revision as of 08:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028754, complete gene.| tag = OsI_293...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028754, complete gene.

LocusTag

OsI_29398

Ensembl Transcript ID

BGIOSGA028754-TA

Ensembl Protein ID

BGIOSGA028754-PA

Length

4522

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22947803..22952324

Sequence Coding Region

22947803..22948283,22948448..22948920,22949032..22949457,22949795..22950361,22950545..22951455
,22951544..22952324

Genome Context

<gbrowseImage1> name=IndicaChromosome08:22947803..22952324 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:22947803..22952324 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAATTCCCAATTTTCATTCCAATTCTCCCAATTCTCCCAATGGAGATGGAGTGCACCCCCCGGAGACTATACAATATCCTGAATCCCTGACTGCACCTGACTTTCGCAGAGGTGCTCCCTGGAACGGTGGTCCAAGAAGAGGGAGGAGAGGAGGACGATCTGGTAGGGGAAGGGGAGGACGTGGCTGGACTCCCACAGAAAATAAATGGGAAACGGACGATGAGCTGATGGATACTGCATCGAGTCCAGTAAAGATTAATCATGGACCGACCAGATCTTCATCTTCAAGCAAGAGAAGACTTGATCTTGAGGGGGAACACCAAAAAGATGCAACCAGTGATATTCTGCTTCTGGAATCATCTGAGATGGTGGAGAAGAGGACCCAAGGGGTACAGGAGTCTGGTGACGAGATCCAGAAGATGGAAGAGTTCGGGGCAACAAGTAGAGATGTCAAGAAACAGAAGATGGAGGGTGCAAAAACACGACAAAATCAAGGTTTTGTGGAGAATATTAAATGGCGAATTGGCCTTCGAGGATGTCTGGCTGTCAATGGTATAGGAAAAGGAGGAGGAATTGCCCTGTTCTGGGATGAAAGCGTAAATGTGACTATCAAGTCCTACAATTTGAGACATATCGATGCAGTTATCACAGAGCAGAATCAGGATCCTCAGAGAGCTACCTTTGTTTATGGTGAACCAAAGGCTCAAGATAGACACCTGATGTGGACACTTCTAAGAAGAATCAAGCAAAATACAAGTGATCCTTGGTTAATGATTAGGGATTTCAACGAGGCAATGTGGCAGTCTGAACACTTGTCACAAAACCGAAGATCTGAAACCCAAATGAGAGAGTTCCGATCTGTTCTATCATATTGTGATCTTCATGATCTTGGTTTCCATGGGATACCTTGGACTTATGATAACATGCAAAGGGGCGACCGCAATGTTAGAAAGGAAGAACATATAAGATACCAGCGACAACAGACTATGAGATATGAAGAAGTCTGGGAGAGAGAGTCATCCCTCCCAGAGGTCATACAAAGTGCATGGAGTGATGGCAACGCTATCACACATTTAGGCGACATTAGTGCGAAGATGAAAAATACAATGTGCAAGTTATCTAGATGGAGTAAAGAGAAGATAGGGAATGTAAGAAAGAAGATTGTTGCCTTACGAGACAAATTAAGAGAGTGCAGGAGCATGGGATCCCTTGATTCCGATGTCCAAGTCCGACAAATAAAAAAAGAATTAGAAGAGCTCCTGCATAGAGAGGAAATCTGGTGGAAGCAACGATCATGTATCATGTGGCTAAAGGAAGGTGATCGTAACACCAGATACTTCCACTTAAAGGCCTCATGGCAATCCAGGAAGAACAGAATGCAAGAAGGAGTTAATGACACTGTAATCGTCATGATACCAAAGAAAAGCCTAGCGGAGGATATGAAAGATTTCAGGCCGATTAGTTTATGTAATGTGGTGTACAAAGTTGTGGCTAAGTGTCTGGTGAACAGATTAAGGCCACTGCTACACGATGTGATTTCTGAAGCTCAGAGTGCTTTCGTTCCTGGAAGACTAATCACAGACAACGCTTTAATAGCGTTTGAATGCTTTCATTCTATTCAGAAATGTAATCGTGAGAACCAAAACTTCTGCGCCCTGAAATTAGATCTCTCTAAAGCTTATGACCACGTTGATTGGCAATTCCTAGATGGTGTGATGGAAAGGATGGGCTTCTGTGATAAATGGCAAAGCTGGATCATGGCATGTGTGACTTCAGTTCAATACAGCGTTCGTTTCAATGGGCACTTGCTAGAACCTTTCTCTCCAACGAGAGGTCTTCGCCAAGGTGATCCATTGAGCCCCTACCTTTTTCTACTAGTTGCGGATGGTTTATCAAATATAATAAAGAGTAACGAATCTGAAGGTCTCATTCAACCTTTGAAGCAACGTCAGGAGGACATAAAACGAATCCTGGGGGTTACTAACTCCTCTTTTGAGGAGAAATACTTGGGACTCCCAACTCCCGAGGGAAGGATGAAAGCTGGTCAGTTTCAACCAATCAAGGATAGATTATCCAAGAGAATGTCAGATTGGAATGAAAAATACATGTCTTCAGGAGCAAAAGATGTCTTGATAAAAAGTGTTGCCCAAGCTCTGCCAACGTATACGATGGGTATCTTTAAAATGACAGACAAGTTTTGTGAAGAAGTATCCCAAATGATTCGCAATTTCTGGTGGGGTCATGAGAAAGGAGAGAAGAAAGTGCACTGGATAGCGTGGGAAAAGATCACTAGCCTGAAGATCCATGGGGGTTTGGGGTTTAGGGACATGAAATGTTTCAATCAAGCTTTGTTAGCTAAACAAGCTTGGAGGCTGATCACAACTCCTGAGAGTCTTTGCGCTCGAGTTTTAAAGGCGAAATACTTCCCAAGTGGAAGTCTGCTGGACATAGCCTTCCCGACAGTTTCTTTCCCTACCTGGAAAGGAGTCCAATATGGTTTGGATCTGATCAAACAAGGCATAATTTGGAGAAGATGGGTGGCACAGGGTGAGCGAGTCAATGTCCTGTGGAAAAATGCAAGGAACAGGCTAATCTATGTGAATGAACTAATGGAACCGGGGTTGAAAAGCTGGAATGAAAACCTAGTTCGTCATGTGATGAATAAGGATGATGCCGAAGAGGTCCTCAAGATCAGGTTATCGGAATGCCAACCGGATGATTTTCCAGCCTCGCATTTGGAGAAATCAGGACTGTTTACCGTGAAGAGTGCATATAGATTGGCCTGGAACTTATCTAATCATGGTAGGTCAGATGCCTCGTCTAGCGATGCACCATCGGGTGAGAGGAAGATATGTGTGGAAGATGGTTTTCATGCAACCGTGGCTTGTCCGAGAGCGAAAGCGTTGCAAATATGTGGATCTAGTGTGGAAGATGGTTTTCATGCAACCGTGGCTTGTCCGAGAGCGAAAGCGTTGCGTGAAGCTATTAGGGAAATCTGGCACTTACCTCCAGAGAATAAGTTTGTAAATTCAGGTCCAGATTGGTTGTTGCTATTGTTGGACGGATCAAATGAAGAAGAAAAGGCTCATACGCTGTTCACATTATGGCGGGCTTGGCATTGCAGAAATGAAATTATCCATGGCAAGGAGATGAGCCCTATAGCAAGCTCTATCAACTTTTTGATGAACTACGAAGATTGCACTCTAATGACTCGGCAACAACCTGATGATGTGAAAGGGAAAGGACCAATGTTTGTCGAGACACACATACAACGACAGCTGAACAAAAAGCAGGTGTCCAAGTGGCAAACCCCACCAGAAGGTGTAGCCAAGTTGAATGTTGATGCAGGTTTCAAACCGGACACAGGTGAAACAGGCGCTGGGATAATAATTAGGGAGTGTCGAGGGCTCGTACTACTGGCTTCCTGTAAGAAGCTACCGCGATGCAGTTCGGCAATGCAAGCTGAAGCCTTGGTGTGTTTGGAAGGTATCCGGCTAGCTACTGAATGGGTGAATATGCCACTTATCTTAGAATCAGATAATGCAAGTGTCGTCGCTGAGTTAAACGCGACCAATGTCTCAAGAGCAGATTGGAGTGGCATAATTTCAGATGTTAAAGCGGCAATGTTATTTTAG</cdnaseq>

Protein Sequence

<aaseq>MKIPNFHSNSPNSPNGDGVHPPETIQYPESLTAPDFRRGAPWNGGPRRGRRGGRSGRGRGGRGWTPTENKWETDDELMDTASSPVKINHGPTRSSSSSKRRLDLEGEHQKDATSDILLLESSEMVEKRTQGVQESGDEIQKMEEFGATSRDVKKQKMEGAKTRQNQGFVENIKWRIGLRGCLAVNGIGKGGGIALFWDESVNVTIKSYNLRHIDAVITEQNQDPQRATFVYGEPKAQDRHLMWTLLRRIKQNTSDPWLMIRDFNEAMWQSEHLSQNRRSETQMREFRSVLSYCDLHDLGFHGIPWTYDNMQRGDRNVRKEEHIRYQRQQTMRYEEVWERESSLPEVIQSAWSDGNAITHLGDISAKMKNTMCKLSRWSKEKIGNVRKKIVALRDKLRECRSMGSLDSDVQVRQIKKELEELLHREEIWWKQRSCIMWLKEGDRNTRYFHLKASWQSRKNRMQEGVNDTVIVMIPKKSLAEDMKDFRPISLCNVVYKVVAKCLVNRLRPLLHDVISEAQSAFVPGRLITDNALIAFECFHSIQKCNRENQNFCALKLDLSKAYDHVDWQFLDGVMERMGFCDKWQSWIMACVTSVQYSVRFNGHLLEPFSPTRGLRQGDPLSPYLFLLVADGLSNIIKSNESEGLIQPLKQRQEDIKRILGVTNSSFEEKYLGLPTPEGRMKAGQFQPIKDRLSKRMSDWNEKYMSSGAKDVLIKSVAQALPTYTMGIFKMTDKFCEEVSQMIRNFWWGHEKGEKKVHWIAWEKITSLKIHGGLGFRDMKCFNQALLAKQAWRLITTPESLCARVLKAKYFPSGSLLDIAFPTVSFPTWKGVQYGLDLIKQGIIWRRWVAQGERVNVLWKNARNRLIYVNELMEPGLKSWNENLVRHVMNKDDAEEVLKIRLSECQPDDFPASHLEKSGLFTVKSAYRLAWNLSNHGRSDASSSDAPSGERKICVEDGFHATVACPRAKALQICGSSVEDGFHATVACPRAKALREAIREIWHLPPENKFVNSGPDWLLLLLDGSNEEEKAHTLFTLWRAWHCRNEIIHGKEMSPIASSINFLMNYEDCTLMTRQQPDDVKGKGPMFVETHIQRQLNKKQVSKWQTPPEGVAKLNVDAGFKPDTGETGAGIIIRECRGLVLLASCKKLPRCSSAMQAEALVCLEGIRLATEWVNMPLILESDNASVVAELNATNVSRADWSGIISDVKAAMLF</aaseq>

Gene Sequence

<dnaseqindica>1..481#646..1118#1230..1655#1993..2559#2743..3653#3742..4522#ATGAAAATTCCCAATTTTCATTCCAATTCTCCCAATTCTCCCAATGGAGATGGAGTGCACCCCCCGGAGACTATACAATATCCTGAATCCCTGACTGCACCTGACTTTCGCAGAGGTGCTCCCTGGAACGGTGGTCCAAGAAGAGGGAGGAGAGGAGGACGATCTGGTAGGGGAAGGGGAGGACGTGGCTGGACTCCCACAGAAAATAAATGGGAAACGGACGATGAGCTGATGGATACTGCATCGAGTCCAGTAAAGATTAATCATGGACCGACCAGATCTTCATCTTCAAGCAAGAGAAGACTTGATCTTGAGGGGGAACACCAAAAAGATGCAACCAGTGATATTCTGCTTCTGGAATCATCTGAGATGGTGGAGAAGAGGACCCAAGGGGTACAGGAGTCTGGTGACGAGATCCAGAAGATGGAAGAGTTCGGGGCAACAAGTAGAGATGTCAAGAAACAGAAGATGGAGGGTGCAAGTAATAATTCTGATTTGGCAACATCGGCGGGCTCCTTGGAGGAGCACCGCCGGGCCTAATGTGTCTTTTAAGCTGGAACTGTCGGGGCCTTGGGCGACCCCGAGCAGTTCAAGAGCTTGTCTGCATGGTGCAGACTCATCGCCCAAAGGTGGTGTTTTTATCAGAAACACGACAAAATCAAGGTTTTGTGGAGAATATTAAATGGCGAATTGGCCTTCGAGGATGTCTGGCTGTCAATGGTATAGGAAAAGGAGGAGGAATTGCCCTGTTCTGGGATGAAAGCGTAAATGTGACTATCAAGTCCTACAATTTGAGACATATCGATGCAGTTATCACAGAGCAGAATCAGGATCCTCAGAGAGCTACCTTTGTTTATGGTGAACCAAAGGCTCAAGATAGACACCTGATGTGGACACTTCTAAGAAGAATCAAGCAAAATACAAGTGATCCTTGGTTAATGATTAGGGATTTCAACGAGGCAATGTGGCAGTCTGAACACTTGTCACAAAACCGAAGATCTGAAACCCAAATGAGAGAGTTCCGATCTGTTCTATCATATTGTGATCTTCATGATCTTGGTTTCCATGGGATACCTTGGACTTATGATAACATGCAAAGGGGCGACCGCAATGTTAGAGTGAGACTTGATAGAGCAGTTGCCTCGCCAGAATGGAAAGATTGATTCAACCAAGCAGTTGTGACACATCCTACTTCCCCGTATTCAGATCATGCACCTCTGCTACTGCAGAAGGAAGAACATATAAGATACCAGCGACAACAGACTATGAGATATGAAGAAGTCTGGGAGAGAGAGTCATCCCTCCCAGAGGTCATACAAAGTGCATGGAGTGATGGCAACGCTATCACACATTTAGGCGACATTAGTGCGAAGATGAAAAATACAATGTGCAAGTTATCTAGATGGAGTAAAGAGAAGATAGGGAATGTAAGAAAGAAGATTGTTGCCTTACGAGACAAATTAAGAGAGTGCAGGAGCATGGGATCCCTTGATTCCGATGTCCAAGTCCGACAAATAAAAAAAGAATTAGAAGAGCTCCTGCATAGAGAGGAAATCTGGTGGAAGCAACGATCATGTATCATGTGGCTAAAGGAAGGTGATCGTAACACCAGATACTTCCACTTAAAGGCCTCATGGCAATCCAGGAAGAACAGAGTAAGAAAGCTAAAGAGAAACGATGGCACGGCCACATGTGAAATAGGTGAAATGGAAGAGTTGGCACACAGTTTTTTTTCAGCAGCTATATTTGAAGGATGACAGACTTAATCCTGAGAATTTATTAAGCTTTTATGCACAAAATATTACAGAAGAAATGAATAGGAAGTTAACTGAACCGTTCTCGAAGGAAGAAATTAGTGATGCACTCTTCCAGATCGGACCACTAAAGGCGCCGGGGCCGGATGGTTTTCCTGCCAGATTCTTCCAAAAGAACTGGGGGATACTTAAGGAGGATGTTGTCAGGGCAGTGAAAATTTTCTTTGTTGATGGACAGATGCAAGAAGGAGTTAATGACACTGTAATCGTCATGATACCAAAGAAAAGCCTAGCGGAGGATATGAAAGATTTCAGGCCGATTAGTTTATGTAATGTGGTGTACAAAGTTGTGGCTAAGTGTCTGGTGAACAGATTAAGGCCACTGCTACACGATGTGATTTCTGAAGCTCAGAGTGCTTTCGTTCCTGGAAGACTAATCACAGACAACGCTTTAATAGCGTTTGAATGCTTTCATTCTATTCAGAAATGTAATCGTGAGAACCAAAACTTCTGCGCCCTGAAATTAGATCTCTCTAAAGCTTATGACCACGTTGATTGGCAATTCCTAGATGGTGTGATGGAAAGGATGGGCTTCTGTGATAAATGGCAAAGCTGGATCATGGCATGTGTGACTTCAGTTCAATACAGCGTTCGTTTCAATGGGCACTTGCTAGAACCTTTCTCTCCAACGAGAGGTCTTCGCCAAGGTGATCCATTGAGCCCCTACCTTTTTCTACTAGTTGCGGATGGTTTATCAAATATAATAAAGAGTAACGAATCTGAAGGTCTCATTCAACCTTTGAAGGTATGTAGAAGAGTGCCAAGAATTTCGCATCTCCTATTTGCTGATGATAGCTTGTTATTTTTTAAGGCGGATACTGAGCAAGCTAGCAGAATTAGAGATGTGCTACAAATGTATGAAAGCAGCACAGGACAGCTTATTAATCCTTCTAAGTGCTCCATGCTTTTCAGTGACTTTTGCCCATAGCAACGTCAGGAGGACATAAAACGAATCCTGGGGGTTACTAACTCCTCTTTTGAGGAGAAATACTTGGGACTCCCAACTCCCGAGGGAAGGATGAAAGCTGGTCAGTTTCAACCAATCAAGGATAGATTATCCAAGAGAATGTCAGATTGGAATGAAAAATACATGTCTTCAGGAGCAAAAGATGTCTTGATAAAAAGTGTTGCCCAAGCTCTGCCAACGTATACGATGGGTATCTTTAAAATGACAGACAAGTTTTGTGAAGAAGTATCCCAAATGATTCGCAATTTCTGGTGGGGTCATGAGAAAGGAGAGAAGAAAGTGCACTGGATAGCGTGGGAAAAGATCACTAGCCTGAAGATCCATGGGGGTTTGGGGTTTAGGGACATGAAATGTTTCAATCAAGCTTTGTTAGCTAAACAAGCTTGGAGGCTGATCACAACTCCTGAGAGTCTTTGCGCTCGAGTTTTAAAGGCGAAATACTTCCCAAGTGGAAGTCTGCTGGACATAGCCTTCCCGACAGTTTCTTTCCCTACCTGGAAAGGAGTCCAATATGGTTTGGATCTGATCAAACAAGGCATAATTTGGAGAAGATGGGTGGCACAGGGTGAGCGAGTCAATGTCCTGTGGAAAAATGCAAGGAACAGGCTAATCTATGTGAATGAACTAATGGAACCGGGGTTGAAAAGCTGGAATGAAAACCTAGTTCGTCATGTGATGAATAAGGATGATGCCGAAGAGGTCCTCAAGATCAGGTTATCGGAATGCCAACCGGATGATTTTCCAGCCTCGCATTTGGAGAAATCAGGACTGTTTACCGTGAAGAGTGCATATAGATTGGCCTGGAACTTATCTAATCATGGTAGGTCAGATGCCTCGTCTAGCGATGCACCATCGGGTGAGAGGAAGATATGGTTCGTTTTGTGGAAGACGAAAGTACCAGCAAAAATCAAAATCTTTGCATGGAAATTGGCAAGGTATCTGTCAAATATGTGGATCTAGTGTGGAAGATGGTTTTCATGCAACCGTGGCTTGTCCGAGAGCGAAAGCGTTGCAAATATGTGGATCTAGTGTGGAAGATGGTTTTCATGCAACCGTGGCTTGTCCGAGAGCGAAAGCGTTGCGTGAAGCTATTAGGGAAATCTGGCACTTACCTCCAGAGAATAAGTTTGTAAATTCAGGTCCAGATTGGTTGTTGCTATTGTTGGACGGATCAAATGAAGAAGAAAAGGCTCATACGCTGTTCACATTATGGCGGGCTTGGCATTGCAGAAATGAAATTATCCATGGCAAGGAGATGAGCCCTATAGCAAGCTCTATCAACTTTTTGATGAACTACGAAGATTGCACTCTAATGACTCGGCAACAACCTGATGATGTGAAAGGGAAAGGACCAATGTTTGTCGAGACACACATACAACGACAGCTGAACAAAAAGCAGGTGTCCAAGTGGCAAACCCCACCAGAAGGTGTAGCCAAGTTGAATGTTGATGCAGGTTTCAAACCGGACACAGGTGAAACAGGCGCTGGGATAATAATTAGGGAGTGTCGAGGGCTCGTACTACTGGCTTCCTGTAAGAAGCTACCGCGATGCAGTTCGGCAATGCAAGCTGAAGCCTTGGTGTGTTTGGAAGGTATCCGGCTAGCTACTGAATGGGTGAATATGCCACTTATCTTAGAATCAGATAATGCAAGTGTCGTCGCTGAGTTAAACGCGACCAATGTCTCAAGAGCAGATTGGAGTGGCATAATTTCAGATGTTAAAGCGGCAATGTTATTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028754