BGIOSGA028865

From RiceWiki
Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028865| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028865, complete gene.| tag = OsI_296...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028865

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028865, complete gene.

LocusTag

OsI_29636

Ensembl Transcript ID

BGIOSGA028865-TA

Ensembl Protein ID

BGIOSGA028865-PA

Length

4236

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25460524..25464759

Sequence Coding Region

25460524..25460608,25461897..25461970,25462119..25462292,25462384..25462605,25462969..25463294
,25463633..25463762,25464130..25464426,25464535..25464759

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25460524..25464759 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25460524..25464759 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGTTGGGGAAACAACGAGTCTTCATCTTCACCGCCTCCACTGAGATCTCCGGCGTCTCCACGCGCGAGCATGGTGAGGGCTATGGATTCCTGTACTGCAAATCTCATGTCACGGCTGAGCAGCATTTACAGCCAACACAGGACTTCTGGATTGCGGCTAGTCCTTCTAAAGTGGTTCAAGCAGATGCTGCTGCACTTGGGACCATAGCTGCTGATATGGCACCTGTTGTTGATGGTTTTTCTGCTGATGATGACGAGCTTGACCTAGACAGCCCAACTGAGGGTTTCTCATCCATTCCTGAAGCTATTGAGGATATTCGCCAAGGAAAATATGTGATTGTTGTGGACGATGAAGATAGAGAGAATGAAGGAGATCTTATAATGGCAGCATCAAAGGTGACACCTGAGGCTATGGCTTTCATAGTGAGGCATGGGACAGGCATTGTATGTGTCAGCATGAAAGAAGATGACCTGGAAAGACTAGAACTTCCTCTTATGGTGACAACAAAGGAAAATGAAGAGAAGCTGCGGACTGCCTTCACTGTTTCAGTGGATGCTAAAGAAGGCACAACAACAGGGGTTTCAGCTAAGGATCGGGCAAATACAGTCTTAGCACTTGCATCTCCTAATTCTAAGCCTGAAGACTTCAACAGGCCAGGACATATTTTTCCTCTTAAATATAGAGAAGGAGGTGTGCTGAAAAGGGCTGGGCATACTGAAGCATCAGTTGACCTTGCCATGTTGGCTGGGTTACCTCCTGCTGCTGTTCTTTGTGAAATTGTTGATGATGACGATGGATCCATGGCTTTATTGCCAAAACTCCAAGATTTTGCAAGAAGGGAGAACCTGAAGATAATTTCAATTGCGGACTTGATTAGGTATAGGAGGAAGAGAGACAGATTGGTAGAACGTGTTTGTGTTACACCTTTACAATTACAATGGGGATCATTTCAATCTTATTGCTACCGATCTCTTATTGATGGGATGGAGCACATTGCTATGGTCAAGGGTGATGTTGGTGATGGCCAGGATATCTTAGTGCGAGTGCATTCGGAGTGCCTAACTGGAGATATATTTGGATCAGCCAGGTGTGATTGTGGGAATCAACTTGCCCTGGCAATGACCATGATTGAGAAGACTGGCAGGGGTGTAGTAGTTTACCTTCGTGGACATGAAGGTAGGGGCATTGGTTTGGGTCACAAGCTTCGTGCATACAATTTGCAGGACGATGGGCGGGATACTGTTGAGGCTAATGAGGATCTAGGTCTGCCGGTTGATTCACGAGAGTACGGTATTGGTGCACAGATACTACGAGATCTTGGTGTCCGAACCATGAGGCTTATGACTAACAATCCTGCGAAATATACTGGACTGAAGGGCTATGGTTTGAGTGTCTTGGGCAGAGTGCCACTGTTGACACCAATAACCAATGAGAATCGGCGTTACATGGAAACAAAGAGATTAAAGATGGGGCATGTTTATGGAACCCGGCCTAGTGTAATACAAGCACTTGGGCTGATGGCGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MRLGKQRVFIFTASTEISGVSTREHGEGYGFLYCKSHVTAEQHLQPTQDFWIAASPSKVVQADAAALGTIAADMAPVVDGFSADDDELDLDSPTEGFSSIPEAIEDIRQGKYVIVVDDEDRENEGDLIMAASKVTPEAMAFIVRHGTGIVCVSMKEDDLERLELPLMVTTKENEEKLRTAFTVSVDAKEGTTTGVSAKDRANTVLALASPNSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPAAVLCEIVDDDDGSMALLPKLQDFARRENLKIISIADLIRYRRKRDRLVERVCVTPLQLQWGSFQSYCYRSLIDGMEHIAMVKGDVGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMTMIEKTGRGVVVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEDLGLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGLKGYGLSVLGRVPLLTPITNENRRYMETKRLKMGHVYGTRPSVIQALGLMAA</aaseq>

Gene Sequence

<dnaseqindica>1..85#1374..1447#1596..1769#1861..2082#2446..2771#3110..3239#3607..3903#4012..4236#ATGAGGTTGGGGAAACAACGAGTCTTCATCTTCACCGCCTCCACTGAGATCTCCGGCGTCTCCACGCGCGAGCATGGTGAGGGCTGTGAGTCTGAGACTGGCGACGGCCAACCTCCTACTCCCGACGGCGGCGGAGGCACCTCTTGCACGCACCATACCTGACGAGTGGGCCTAGACATTTGCCACGTCAGTGAAAAAAAATGTGGAGAAAAGAGAGGGAGAGAGATGGTGTTTACGTGGCATGCTAACATGTGGGGCCCACGCTGACTCAGCCGCCACGTACACTAAAACCGGGGTCAAACCATCGAAGGACCTCGGGTGACCGGTTTCATATAGCTAAGGAACCCCGTATATCTGGTTTTGCGGTTCGATGACGTTTTCGTATCTCGGTGACAAGATCAGGACCTCCGGTGCACCTTTCCATTAGTTTTTCTTTTCCTTACATCGGTACACTGTGCCACGCCGCCACCTACCTGTCGACGTTGCAGACTTGCCCTATAGTGCCATCCCCACCCGCGCGGCTCGTCTCGTCTCGTCTTCTCCCGAACGAACAAAGCACCCGAACCACTCTCGTATCTTCCCTGTTCCACCTTCCACCACCCTCTTTATCCAAACGCCACCGCTCTGTCACTCTCCTTCCTCCCGGCGGAGGCACGGCCAGCCTCCTCCCGCTCCCGGCGAACAGGTCCGGACTCCGGAGGCACGGCGTGCGCGGCCGCCTTACCTGGCTGCGCGCGCGCACAGCCGGGTGATCAGGTAAAGGCCAGGGGTAGACGCGGCCGGCCATCCATCTGAGTTAGAACGGAATCGAAGGTAAATCGTTCTTCTCTCTCTCAGCGCCACGTCATGAGCCGGCTTGGTGTAGAGCTCGTCCGGATTTAGTTGATTGTTCGATTCGTTTCCGTTCAATCAAACCCATCCGGTTTCTTCCCCATTCTATTACTTGGACGCGTGCGAGGTGCAGTAATAATAGATAGCAATTTGTTTCCAAAAGAATTCGAGGGTTCAGCTGAATCTCATGCGGTACTTTAGGTCCGCCCCTGGAGTTTTTGAGGGTGTTTGTTATGCGATTTTGCTGTGTTTAGCTTTACTCTAGATTCTAGATGACTTGGTTTATTTAGGAGATGGATTGTTGTTTTCAAGGGTTTATTCCGCATTTCTGGTAATCAATAGGCACTAGATACTTATTCTAAATTTCCTTTTGAGGAAAGTGAGATTCTCCCCTGCACAAGGCGGTACTGCGGTAGTAACATAGAAAATCTCTGTAACGTTACTGAAATAATTTGAATTCCTTTTTCCATCACATCCTTTGGGTATATTATTTGAATATTTTTATTCCTAACTTGTTTCATAGTTCTGATTTTTTTCCTCAGATGGATTCCTGTACTGCAAATCTCATGTCACGGCTGAGCAGCATTTACAGCCAACACAGGACTTCTGGATTGCGGTCTGATCGTTCAATTATGCCAAATTCTACATCAAACAGTTTGAGGACAATCAGTTCTGTTCACTTGCCGTATAACCATCGGGCCAGAAATTTTCATATATCTCATGCTGTGGGTGATTCTTCAGAACATGTTATTATAAATGGACAGGCTAGTCCTTCTAAAGTGGTTCAAGCAGATGCTGCTGCACTTGGGACCATAGCTGCTGATATGGCACCTGTTGTTGATGGTTTTTCTGCTGATGATGACGAGCTTGACCTAGACAGCCCAACTGAGGGTTTCTCATCCATTCCTGAAGCTATTGAGGATATTCGCCAAGGAAAAGTATGGATCTTATTAAAAAATATCATGTTTTCTAGCATTAATTAGGTTTTTGAAGTAGTTCCTTCATCTGTTGACAGTGTTTATATTGCAGTATGTGATTGTTGTGGACGATGAAGATAGAGAGAATGAAGGAGATCTTATAATGGCAGCATCAAAGGTGACACCTGAGGCTATGGCTTTCATAGTGAGGCATGGGACAGGCATTGTATGTGTCAGCATGAAAGAAGATGACCTGGAAAGACTAGAACTTCCTCTTATGGTGACAACAAAGGAAAATGAAGAGAAGCTGCGGACTGCCTTCACTGTTTCAGTGGTATGTATTTTCATTCGCTGTTATTGCTTTTTGTAGCACAAGATCATTTTACATATATGGTAACTTGTGTTAACAAGAAAGAGAACCATTGGGGTCTGTTAACCACTTTGGTTAGAATGAGCTAAAAGGGTCACCTTTTGATTGAAATCACTTTGATGCGTGTATGTATTCCTTTTAAAAAACTATGTTATGTCCATGACTATTTTGTGCAAAAGATGGACATAATCGAGTGTCTTATCATTCCTATCTCCTTTGCTTGTTGTGTATGGATGTACTTTTTTTCCCCAGTTTTTGCCTTCTATGAGAGCATATTGCTTATGCCCTGTTTTTCTAATCTGTCTGTGCTAAATATTTGTATTGTAGGATGCTAAAGAAGGCACAACAACAGGGGTTTCAGCTAAGGATCGGGCAAATACAGTCTTAGCACTTGCATCTCCTAATTCTAAGCCTGAAGACTTCAACAGGCCAGGACATATTTTTCCTCTTAAATATAGAGAAGGAGGTGTGCTGAAAAGGGCTGGGCATACTGAAGCATCAGTTGACCTTGCCATGTTGGCTGGGTTACCTCCTGCTGCTGTTCTTTGTGAAATTGTTGATGATGACGATGGATCCATGGCTTTATTGCCAAAACTCCAAGATTTTGCAAGAAGGGAGAACCTGAAGATAATTTCAATTGCGGACTTGATTAGGTTTGCTTTATTTAATATATTCAAGTGTCAATCCTTTTTTCCATAAGAATCATACATGCTGCATTGAAGTACAAAATTTAAGAGTAATTATTATTTACAGAAGGGCTAATGGTTTCATGATAAGTAGTAACGGGAGAACAGGTCATTTTTTCTATTGTACTTCATAACCACATTTCAAGCAAATGTTTTCTTACAGGAATGCAAAGCACAGTTGATATATATACATGTAAAACTATATTTGTGGAAGATATGAATTATAAATTATAATACATGGATTATTGTTTTGTGGAACTTTCCGGCTACTATATATATCAGCTACTAATAATTTTCTTATGCAGGTATAGGAGGAAGAGAGACAGATTGGTAGAACGTGTTTGTGTTACACCTTTACAATTACAATGGGGATCATTTCAATCTTATTGCTACCGATCTCTTATTGATGGGATGGAGCACATTGCTATGGTCAAGGTAAGCATCCCTCAACAAAGACTATGTTAAGTACTTTGATACAATGTCTACTTTTAGGAGAGCGTTTACTTTTTTTAAATAAAAAAAAGTAAAATCCATGCCCTTATGCATTATATAGAAAAGTAGAATCACATGTACAAAATCCTGAACAAATTACAGTATAACAAGATATCTTTGCCTGTTACATTAGTCAGACTGGATCGCAACTAATGATTCAGTGATACCCAGGACATGGTTCATCTGCAATGATTGTTAGAAAGTAGTGAAGCAACGGTTTCTTTTATTGTATTTAAGTTATAAGCTCTACCAGACTTTCTCATCCAGGAAGAAGTTGAACCTAGAATATATATTTTTCCCTTGTATGCAGGGTGATGTTGGTGATGGCCAGGATATCTTAGTGCGAGTGCATTCGGAGTGCCTAACTGGAGATATATTTGGATCAGCCAGGTGTGATTGTGGGAATCAACTTGCCCTGGCAATGACCATGATTGAGAAGACTGGCAGGGGTGTAGTAGTTTACCTTCGTGGACATGAAGGTAGGGGCATTGGTTTGGGTCACAAGCTTCGTGCATACAATTTGCAGGACGATGGGCGGGATACTGTTGAGGCTAATGAGGATCTAGGTCTGCCGGTTGATTCACGAGAGTACGGTATTGGTGCACAGGTATATATAAATTGTCTGTACTCCTGAACTATTGAAAATGAACCTGTGACATAGCGTTCCTGTTCACGCTGTTCCAGATTCCGCTCATTGCTGTTTTTCTCTCTGCAGATACTACGAGATCTTGGTGTCCGAACCATGAGGCTTATGACTAACAATCCTGCGAAATATACTGGACTGAAGGGCTATGGTTTGAGTGTCTTGGGCAGAGTGCCACTGTTGACACCAATAACCAATGAGAATCGGCGTTACATGGAAACAAAGAGATTAAAGATGGGGCATGTTTATGGAACCCGGCCTAGTGTAATACAAGCACTTGGGCTGATGGCGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028865