BGIOSGA028876

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028876| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028876, complete gene.| tag = P0419H0...")
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Gene Name

BGIOSGA028876

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028876, complete gene.

LocusTag

P0419H09.37-2

Ensembl Transcript ID

BGIOSGA028876-TA

Ensembl Protein ID

BGIOSGA028876-PA

Length

4357

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25636625..25640981

Sequence Coding Region

25636625..25636718,25637211..25637826,25639406..25639547,25639622..25640866,25640916..25640981

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25636625..25640981 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25636625..25640981 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTAGCGCGCGGCTGGTGGTGCACAAGCGTGGGCGGCAGCAGGCTCATGGCCGGCGGCACATGAGCGTGGAGCGCGACGGGCAACTTAGCGTCCGATCTGGACGAGCTCGCCGCCGCCTCCGCCCACGCCGTGGACCGCGGAGCAGCTGCCCCGACCGCGCCGTCTTCAACGAGAGCGCCGGCTCGCGTAAGCAGACCTTCTCCCGCGTCCGCTTCGTCCCCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCCAAGCTGCCCAGGGGCAACGACAAGGAGGACAGCTTCATCGCCTACCACCTCCGCCGCCTCTTCGCGCCCGACGACCCCTCCCTCATCGAGAACCCCTCCTTTCCCCAAACCCAAACCCTAGCTCGGTCGCCGTCTCCCGACCCCGACCAGTTGACCACCAACTCCAGGGGGGTCTCCGTTGATCTGGTGAGCCTCTCACGGCTTGCCGACCCGTACGACGCGGAGCTCGGGAAGCGGACTGCCAGGATGACCACGGAGGAGGAGCTCATGGGCTTCATCTCTAGCCTCGCGGGTCAGTGGGTGAACCAGAGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCCCAGCGGGTGGAGGCTGCAGCTTGGGATCGAGCGGAAGGACCGCAAGGCCTGGGTGAACTGCTTCAGTTATGTGAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATACCTCATGTCACTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCACACAACAACATGGCTTGTGTGCTGACGATGGTGTTAATGTTTTAGGTGTTCAACACCAAATTGGTACAAGTATGGACAGTCAAAGTAATTTGCCAGTTGCTTCTGCTACTTTTTATAGTCATTCAAGAGATCAAGACGAAACGGTTGCAGATGATATAAATTCTTATGAATGTCAACAATGCAATTTAACTTTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAGTGAGTTCTAAGAGGCGTAAGAGTAACAAGGTTAGCAAATTTGGTGAGCCAGTGATAGGCAAAGATGGGAAATTTGAATGCCCAGTATGTAACAAGACGTTTGAGGAACAGTCACGGTACTTTGGTCACATTGGATCCCATGCAAAGTATCAGGGGCTGACTCCTGAAGCATTCCTACAAACCTTTTCAGGAAAGGTTGGTAACAATTCTTTTGCAGGTTTGTCATCTAGCCTTCAAGTATTGGTCGGATCACCACAACTGAATGAGAAGACTACTGCTTGTGAAGCACGATCGCAGCATCACGATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAATCATCCTGCTAACTTCAATGGGCATAATCAATCTTGGTGTAGATCTGATGAAATTCCTCCCACCACAGAAGCTCAAAGCACATGGACTTATAGAAATAATGAGATGAACTGTGCTGATAGAACTGTTCCGAGAACAGTACCTCAGCCCAATGATCACGAGGATTGCAGGGTTAGTGGCTTTGCTGAAGCAACTAATTTTAATGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTTCTCCTTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAAGCATGCTGAGGTTAATAATAGTATGAAATCAAGAGATGTCAACCTCAATTCACGCCTGAACACAATATCCTTTCCTATTGCAACTGCAAACAATGAAACATCGACTGCCCTTAATGACGTGAATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGCTGCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAAATTTCTAGCTCCCTCGGTGTAGCTGACAGATCATCTATTGCTGCCAGATCCTTCAATGCTGGTTATGTTTATGAAAATGGCGCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAAACAAGTTTGGCCATGCGTCCACTCTCTCCTCAATTGACATCTATTGATGCTTATAATAATAACATGGATAGCATAGAAAACAAAACAAGTAACTAA</cdnaseq>

Protein Sequence

<aaseq>MASARLVVHKRGRQQAHGRRHMSVERDGQLSVRSGRARRRLRPRRGPRSSCPDRAVFNESAGSRKQTFSRVRFVPAAAAAAAAASASAAAAAKLPRGNDKEDSFIAYHLRRLFAPDDPSLIENPSFPQTQTLARSPSPDPDQLTTNSRGVSVDLVSLSRLADPYDAELGKRTARMTTEEELMGFISSLAGQWVNQRMRRKLVDASFFGDHLPSGWRLQLGIERKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYGSTQQHGLCADDGVNVLGVQHQIGTSMDSQSNLPVASATFYSHSRDQDETVADDINSYECQQCNLTFHGQSAYAHHLITFHKVSSKRRKSNKVSKFGEPVIGKDGKFECPVCNKTFEEQSRYFGHIGSHAKYQGLTPEAFLQTFSGKVGNNSFAGLSSSLQVLVGSPQLNEKTTACEARSQHHDCSTKHGGNSTRGIDLFNSNHPANFNGHNQSWCRSDEIPPTTEAQSTWTYRNNEMNCADRTVPRTVPQPNDHEDCRVSGFAEATNFNDQAGRHQGFRPFSFGTTNHCQGQIIDHAVAASKHAEVNNSMKSRDVNLNSRLNTISFPIATANNETSTALNDVNRSCITGKGFSGSFSNNDGAASIVLPSSGLNNKISSSLGVADRSSIAARSFNAGYVYENGASEANNIGNKNNTMVYQTSLAMRPLSPQLTSIDAYNNNMDSIENKTSN</aaseq>

Gene Sequence

<dnaseqindica>1..94#587..1202#2782..2923#2998..4242#4292..4357#ATGGCTAGCGCGCGGCTGGTGGTGCACAAGCGTGGGCGGCAGCAGGCTCATGGCCGGCGGCACATGAGCGTGGAGCGCGACGGGCAACTTAGCGGTGAGGGCGACAACCGGTGACCGGTGATGCGGTTGCGCACAGGCCGCGACTGGCGGCGCGGCGGGCGGCGGCACATGGCAGGTAAGCCCAGTGGGTACCCGTCAAGCATACCCGTGCCCGACAGGCATGGGCATAGGCATGAGATTTTGCCCGATAGGTTTTGCGGGCGTGGGTCAGGCACGAGCACGTGGATCTCGGGCGGGACATGGTTTTGCTATGCACATAAACGACCCGACCCGTTGCCCTCCCTACCCTATAGCTCACACCAAACCCGCCCTCTCTCTCTCTTCCCGTGGAGCCCCAACTACGCCGCCAGCCCGCCATCTCATCCCCCGGCGAGCGACACGGTCGCATCCCACCTGAGCTCCGACCGCCGCAGCGGCGGTCGCCTCGCCGGAGCAGAAGCCGCGCGTGGGGGGGAAGGCGGAGGAGGGGAGGGGTTCAATGGAGACGGAGGTGTTCCCCGTGGTTGACCTCCGCGTGCTCACGCAGTCCGATCTGGACGAGCTCGCCGCCGCCTCCGCCCACGCCGTGGACCGCGGAGCAGCTGCCCCGACCGCGCCGTCTTCAACGAGAGCGCCGGCTCGCGTAAGCAGACCTTCTCCCGCGTCCGCTTCGTCCCCGCCGCCGCCGCCGCCGCTGCCGCCGCCTCCGCCTCCGCCGCCGCCGCCGCCAAGCTGCCCAGGGGCAACGACAAGGAGGACAGCTTCATCGCCTACCACCTCCGCCGCCTCTTCGCGCCCGACGACCCCTCCCTCATCGAGAACCCCTCCTTTCCCCAAACCCAAACCCTAGCTCGGTCGCCGTCTCCCGACCCCGACCAGTTGACCACCAACTCCAGGGGGGTCTCCGTTGATCTGGTGAGCCTCTCACGGCTTGCCGACCCGTACGACGCGGAGCTCGGGAAGCGGACTGCCAGGATGACCACGGAGGAGGAGCTCATGGGCTTCATCTCTAGCCTCGCGGGTCAGTGGGTGAACCAGAGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCCCAGCGGGTGGAGGCTGCAGCTTGGGATCGAGCGGAAGGACCGCAAGGCCTGGGTGAACTGCTTCAGTTATGTGAGGTGAGCCTCATCATCCTTTCCTTGCAAATGCTGCAATGCTATGGGATCCGTTGTTGGTAACTGGAATGGGGGTTATAACTTGCAATAAGCTAGAGGGCTGGATGCTTGCTATGATGTTTAGAGATGCGGTAATGTGTGACTATAGATGCAAAGGATGTGTGGTGGATTTGGTTTGTGAAGATTGTTTTATACTCTTTTAGTGTAGTCAACTGTTGCTAATCAATCATGCACAAGTTTATCAGATCAGTTCTTGGTAGTTTTGAATGATTGATTTTTTTTTCAACATGGCCTTCTTGCTGTCATTATGTGGATTGCCTATTTTCCATGGAAGAATAAATCTTATTTGTTAACAATATTATTATGCAAACATACAATAACTGAATACCCCCAGGACGAGCTGTTTCATGACGAGGGGGATGCTATGGCTGGACATTATGGTATAGTATATATAGTAGTGGTGTCGGTATGACAAGGCCTCAGGATTAGCATGTGCTGCAGCAATTGGAGAATCATAGTAGACAAATAGATATTCTACTCCTTATTTCTCCATTAGAGTTTCCTAGTTTTGTCATTGGAGTCCTAGTAGTATTAGATACTAGTTTGTTTCCTTTGCCTTATCTAGAGGCACCTCAATATACAAAGGTAGCCTAGTACTGGATTATGCCTTGAGCAATAAGAAATATCTAAAGGGGATTGACCCAAAAGCCCAGTCATTTCAATGACATACTAGTTAAATGATAATGCTGAATAATCTGGGGGGCAAAGACAAGACTTTTGCCTACCATAGTATAAGAGCAGCGTGGAGCGGTATTGCTTTAAGATAATGAGTTTTGTTTTATTCCTTTGATATTTGCTTTTCCGCACTTCATTTGATCTGTAGTTTTAAGGCATGCATGTTATGCGATTGCAGCAGCATTATTTAGCAATGGCTTGATTGATGCTTACTACTACCTCCGTTTCAGGTTATAAGACTTTCTAGAATCTAGAAAGTCTTATAATATGAAACAGAGGAAGTATATGATAGGTTAAACATAAAGATAGATTTGTATGGCGCATATCATATCTCAAGTATATAACATAACACATGTATGTGTAAATTTGCTTCTCCTGCCGAGTTCTCACTGATACACAGGTCCTAATCCAACCTGTCAATGAGAACCAGTGGATAAAGTGAATTAAGGACATGGCATGGTGTCTAAAATGTCTAAAATAAACAGTAATTTTCATTTGCTTTATTTAACTGCAATGCCTATTTGAAGTAGTGCCTAGAGCACATGAGCATTTCAATCATTATCTCGAATGTTCCTCAGAACTCAGGTGTTCCACCATATATGCTCAGATTTATCATCTGTCGTAGATGAATAATTTTGTTGTAATAACAGTAAAGATCACTTCTCATCACTATAAGTTCGAAAGTATCTGTTAAGATAACAAATTCCTATTTATCTGCTTCACCTTTATCTATCATGTGTGCTACTCATCAGCGAACATATGTTGTGGATGGCTGCATCATTTCAGCGCAATAATTTTGTTCGTCACATTTTTCCCCTGTACTAAATGGGCATGTTGTACTTTCCAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATACCTCATGTCACTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCACACAACAACATGGCTTGTGTGCTGACGATGGTGTTAATGTAAGTTGAAAGTGTATGTCACTTTATCTTGTGAACTTGAGTTTGTCTAGTTTAATTTTTGGAGTTTGTGGCAGGTTTTAGGTGTTCAACACCAAATTGGTACAAGTATGGACAGTCAAAGTAATTTGCCAGTTGCTTCTGCTACTTTTTATAGTCATTCAAGAGATCAAGACGAAACGGTTGCAGATGATATAAATTCTTATGAATGTCAACAATGCAATTTAACTTTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAGTGAGTTCTAAGAGGCGTAAGAGTAACAAGGTTAGCAAATTTGGTGAGCCAGTGATAGGCAAAGATGGGAAATTTGAATGCCCAGTATGTAACAAGACGTTTGAGGAACAGTCACGGTACTTTGGTCACATTGGATCCCATGCAAAGTATCAGGGGCTGACTCCTGAAGCATTCCTACAAACCTTTTCAGGAAAGGTTGGTAACAATTCTTTTGCAGGTTTGTCATCTAGCCTTCAAGTATTGGTCGGATCACCACAACTGAATGAGAAGACTACTGCTTGTGAAGCACGATCGCAGCATCACGATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAATCATCCTGCTAACTTCAATGGGCATAATCAATCTTGGTGTAGATCTGATGAAATTCCTCCCACCACAGAAGCTCAAAGCACATGGACTTATAGAAATAATGAGATGAACTGTGCTGATAGAACTGTTCCGAGAACAGTACCTCAGCCCAATGATCACGAGGATTGCAGGGTTAGTGGCTTTGCTGAAGCAACTAATTTTAATGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTTCTCCTTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAAGCATGCTGAGGTTAATAATAGTATGAAATCAAGAGATGTCAACCTCAATTCACGCCTGAACACAATATCCTTTCCTATTGCAACTGCAAACAATGAAACATCGACTGCCCTTAATGACGTGAATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGCTGCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAAATTTCTAGCTCCCTCGGTGTAGCTGACAGATCATCTATTGCTGCCAGATCCTTCAATGCTGGTTATGTTTATGAAAATGGCGCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAAACAAGTTTGGCCATGCGTCCACTCTCTCCTGTAAGTAACATGGATTGCTTCACGTTTTGTTCAGTGCATTTAAAAATAGCAATTGACATCTATTGATGCTTATAATAATAACATGGATAGCATAGAAAACAAAACAAGTAACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028876