BGIOSGA028888

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028888| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028888, complete gene.| tag = P0605H0...")
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Gene Name

BGIOSGA028888

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028888, complete gene.

LocusTag

P0605H02.26

Ensembl Transcript ID

BGIOSGA028888-TA

Ensembl Protein ID

BGIOSGA028888-PA

Length

5788

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25860789..25866576

Sequence Coding Region

25860789..25860801,25860916..25861038,25861707..25861955,25863983..25864186,25864330..25864459
,25865076..25865145,25865232..25865366,25865462..25865675,25865780..25865921
,25866096..25866228,25866463..25866576

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25860789..25866576 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25860789..25866576 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGACTGCAAGGGAATAAGGCGACGCACGACTTCCTCTCGCTGTACGCCGCCGCCGCCACCGCCACGGACTACTCGCCGCTCCCGCGCCACCCGGACTCCAAGCCCTCGGCGCCGGCGCCGCCGCCCGCTCAAGATTTCTTCCTCAAGACACACGACTTCCTGCCGCAGGTAGAGAAGAGAGCCGACCAGACACCACCGCCGCCGCCGCCGCCGCCGCCCCACGCCGCGGTCACCGCCGAGAAGCAGCTGCTCCACCAGCACGCGTTGGCCGCCGCCGGCGCGTTCACCATCAACCACGCCGTGGCCGCGGCCGCCACCGCCGTCAAGCAGGAGCCGCCCTTCGCGCCGTGGTGCCAGCCCGTCGCCGCCGTAGATCCCCGAGGTCACCAGTGGTCGCTCCCCTTCGCCGCGCGCGCCGTCGCCGTCGCCTCCTCCAGGCCGCAGCAGCAGCAGCAGCAGCCACCGCCGCCGGAGAGGAAGGGTGGCGGTGGATTCATGGACGCCGGCTCCAGATCCAGTGGCGGCGCGGGCTTCGACGACGACGACGGCCATGCCGCGCGCCGCGAGGTCTCCTCCTCGCTGAAAGAGCTCACGGTCAGGGTGGAAGGGAAAGGTGGGAGCTGCAGCGGCAGCGCTGGCACGGATCAGATGCCGAACACGCCGCGCTCGAAGCACTCCGCCACCGAGCAGCGCAGGCGCAGCAAAATCAACGACAGATTTCAACTTCTTAGAGACTTATTGCCTCATAATGATCAAAAGAGAGACAAAGCATCATTTCTCTTAGAGGTTATTGAATACATACGGTTTTTACAAGAGAAAGTACAAAAGTATGAGGTTTCATACCCGGAGTGGAACCAAGAAAATGCAAAGGTTGTGCCATGGACAAACATCTATTTCCGTTCTTCCTGGAAAAATGCGCAGAACAAAGGCCAAGTTCCTGCAGATCATTCACCTGACCCTCCAGAACTTCTGAAAAATGGTTCCCCCTATATGTTCCCTTTTACAGGGAACTCTGATAATAACAATGCAGTTGAAACTGCAGCTGCTTCAGGTGCACAGGATCAGGCAGAAACTGATCCAATGAGTCGTGTGTCTTACAGATCAGTGGACACTCCCAGTCCCAATAATGTTGCAGACAAAGTTACATCTCAGCCACACGCTCAACTGGTGAGACCATCACCTGCAGAGAATCACACAGTAAACTGCGACAAGTTAAATAATTCTGACCTTGCCATCGATGAGGGAACAATCAGTCTATCAAGCCAATATTCCCAAGAGTTGCTTAACAAGTTGAATCATGCCCTGGAAAACTCGGGTATAGATTTGTCCCAAGCCAGCATCTCCGTGCAAATAAATCTTGGCAAGAGGGCTATGAAGAGATCTACTCCTGCTGCAACCTCCACTTCTAAGGAGCTCACTGATCCGGCATCTAATAGTCAAGCAATGGGCCGTCAGCTTAGGTTGGGTGATGGCGCTGAAGAACATCGACAAGCCTCAAAGCGACACAAATCAGATAACAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MGLQGNKATHDFLSLYAAAATATDYSPLPRHPDSKPSAPAPPPAQDFFLKTHDFLPQVEKRADQTPPPPPPPPPHAAVTAEKQLLHQHALAAAGAFTINHAVAAAATAVKQEPPFAPWCQPVAAVDPRGHQWSLPFAARAVAVASSRPQQQQQQPPPPERKGGGGFMDAGSRSSGGAGFDDDDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQMPNTPRSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQKYEVSYPEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFPFTGNSDNNNAVETAAASGAQDQAETDPMSRVSYRSVDTPSPNNVADKVTSQPHAQLVRPSPAENHTVNCDKLNNSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASISVQINLGKRAMKRSTPAATSTSKELTDPASNSQAMGRQLRLGDGAEEHRQASKRHKSDNS</aaseq>

Gene Sequence

<dnaseqindica>1..13#128..250#919..1167#3195..3398#3542..3671#4288..4357#4444..4578#4674..4887#4992..5133#5308..5440#5675..5788#ATGGGACTGCAAGGTACGCGCGCTCTCTCTCTCCTCTTCCCTGTTCGTTCGTTCGTTCGCTCGCCGGAGTGGGGGTTTTCGCCGAGGTTTTCTCCTCCTGAGATCGATTTGGTTGATGTATACGCAGGGAATAAGGCGACGCACGACTTCCTCTCGCTGTACGCCGCCGCCGCCACCGCCACGGACTACTCGCCGCTCCCGCGCCACCCGGACTCCAAGCCCTCGGCGCCGGCGCCGCCGCCCGCTCAAGGTGAGCTAGCTCACGCAATTTTTTTTTTCTCCCGGATGGTGAGGTGGATCTCCCGTCTCGAAATACTTTGCCAAATTCGGCATAGTTTTTTTTTTCTTTTCTTGTTCTCGTGTGAAACCACACAGAATTAACCAGAACGGATCAAGGAATTGCTACCGTCATAATCCTACTATTTGCAGTGGTTTAAAAACTAAATACTAGGAGTATATCATTATGGTTTATGTCTTGTGGAAAAAGATAAACTTTTTTGCGATGTTTGGTCAAGGAAAACGACGAGTTAACGAAGGGAAATGATCACGTGTAGCTAGGCTGTGTGTGTGAGAGAGAGAGAGGGGGCACGATGCAAAGAGACGTCCACGACTTCCTTTCTGTTGCAGTCTACGATTTTCTTTTTCAAAAATTCCGAATGTTAGTGTGCAAAAGTGGTCGGCATATCATTATTCTTGCAGGTTGTCATGCCAGATCATTATCGGTCGATCAGATCTCCGCAAGTTGGTTTTCGAATTCGTATTCTTATTATTACTACAAGTTTAAACTGTTTTCATCCAAACCACTCGATCCACTCCATATTATGCATGCTAAATTGCACAAAAAAAAAGTAATTGAGAGATGGATTTTTGATGGATTTTTTTTCGATGATGCTGAACTTGTGATCATTTCCGTTGCAGATTTCTTCCTCAAGACACACGACTTCCTGCCGCAGGTAGAGAAGAGAGCCGACCAGACACCACCGCCGCCGCCGCCGCCGCCGCCCCACGCCGCGGTCACCGCCGAGAAGCAGCTGCTCCACCAGCACGCGTTGGCCGCCGCCGGCGCGTTCACCATCAACCACGCCGTGGCCGCGGCCGCCACCGCCGTCAAGCAGGAGCCGCCCTTCGCGCCGTGGTGCCAGCCCGTCGCCGCCGTAGATCCCCGAGGTACGCCCGTGCTCTCGTCGCTTGCGCCTTCGATCGCGATCGTCGTGAGCCGCGCCGCGCGCGTGGCGGTGCCCGCCGGTGGTTGGGCGCGCCGCGCGCCACCTCCTCCACGTGCCCGGCGCGGCGCCTTCCTCCTCCTCCGGTGGTTGGGGCGTCGGCGTCGCCGCCGCGCGGCGAGCACGTCGACGCACGCGCGCGACGCGCGTAGCTGGTGGCCACCCGCTGACACGCGGAGGCGGTAGGGGGATGGTAGGGTGGGCGGGGCTAGGGAGTAGGCGAGTAGGCCTGGCCGGCCGCACGGGGGACGTGGGCTCGCTGGGCCCGGATGCGTGTGGGGGACGGGCCTGGACGTGGGCCAGAGGCTGCGTGCTGGGTGCACGTGGATAGCAGCATGGGCCCGGGTACGGGCCTGGTTGTGGGCCATGGGACGTGAGCACTAGAGCGCTCGCTTTTCTGGATAGACCCGGACCACAAGTAATACTGGGACAAGCAGATGAATCCACTTTCAAACTTAAAAAAGCTTACTTTGTATATGAATTTTATTCTATAGAATGGAGGAGGTAGTAAATCATATTGCCATTTGTTATATATCATTGTATTATTAGGATTTTATAAGTGAAGCTTGGGCTTTACGATAAGAGTTAATTAAAGTGTTCATAGTCCACTAAAAAAAGTGTTAATAGATTCTGTAGTATTTTTCACAGGAAACAATGTGACTAATGTGAAAATCATTACATCTAAGGGCTTCTTTTGAATCAAAGGAATTATGATGAATTTCATAAAATTAAAATTCTATATAGAGTAAATTTCACAAAACTACATATACTATGACAAAATTATTACAAAACTACATATTTAACTCAATGTATCACAAAACTATACATTTAACATCAAATTTATCACAAAACTACACATTTAAGATGAAGTGTCACAAAATTACATGTTTAGTAACTAAATTATCATAAAATTACAGGTTTAGAACCAATTTGATCACAAAGTAATAATGTTTATAACTCCACCATAACAATGGTGCTAGGGATTTAAACTCCAAAAGTTGTAGTTTTGTGATAAGTTTCATATTAAATATGCATTTTTGTGATACTTAACCTAAAATCTGCAGTTTTGTGATAAATTTGGTGCTAAATGTGTAGTTTTATGATACAACTCCTTAAGTATGTAGTTTTGTGATAATTTGATCAAAATACATGTAGTTTTGTGAAATTTACTCTTCTATATAAAATTTTCATATGTAGCCCTTTTATTAAAAAGATTGAAGTTTTCCTAATCCAATAAAATTCCTATAGAGTAATAGAATGGTTCATTACATATAAATTTTGGAGAAAACTTAGTAAGAGGTTCAACCTCTTGAAAAAATTCTTCTGAGCCTATCTCTCACGTTCAATTTCCGTATTTTTTCCGTGGTCCAATCAAATAATCATTCTTGTGTTTTTCATGTATTTTACAATCTTCCATTCAGAAATCATGTAATTTTACTATTCCTCTATTTTTTAATCATACGATTTAAAGTACCTTGAATGAATCCTGAACCATGTAACGTGGGTAAACAATTTTTTTACCTTGAGTTTCAACTGGCAAGACTTTTGCTAGGGCAAAGATTCGGGTTTGGATTTAAAAAAAGGATTCGGGTTTGATTCACAGCACTGTTTACCTTACGGTTTTCTCTGTGAATATACAAGTAATAGTTGTCCTTTTGTCGTTCAGCTAACTCCTCTTTCCATCACATGCTTATTACACTTTTTTTTTGTACTACTACAATATTCCAAGTCCAAACAGCACCTCCAAAGGCGAGTACATGAAGATTAAATATTTAACAAACCGTAGTATCCTAAGACGTGGAAAATATATTCAATAATCATCCTGACAATAGACTTTGGAAACATCTAATGATTCTTTCTCTGTTCCAACTCTTCATCCAAACACACTCCTACTAGTTGTACAGTAGTTCAGAAAAACCGGAGGAAAGGGAGCTAAAGGCGTGTGCTTTGTGCTGTTTGTTCACCCGGCAGGTCACCAGTGGTCGCTCCCCTTCGCCGCGCGCGCCGTCGCCGTCGCCTCCTCCAGGCCGCAGCAGCAGCAGCAGCAGCCACCGCCGCCGGAGAGGAAGGGTGGCGGTGGATTCATGGACGCCGGCTCCAGATCCAGTGGCGGCGCGGGCTTCGACGACGACGACGGCCATGCCGCGCGCCGCGAGGTCTCCTCCTCGCTGAAAGGTGGAGTACCTCAATTCTGCATTTCTGATGAATCAGTTTGGTATACGCGCTTTTGGAGACATTTTGGATGTGGGGGGTGGTGAAAATGAACGAGTTTTTGTCGAGATTTTTGTGTTAATTTTGTTTTCTTTTTTTGGGTTTAGAGCTCACGGTCAGGGTGGAAGGGAAAGGTGGGAGCTGCAGCGGCAGCGCTGGCACGGATCAGATGCCGAACACGCCGCGCTCGAAGCACTCCGCCACCGAGCAGCGCAGGCGCAGCAAAATCAACGACAGGTGAGTGGAGAATCGGAGTGCTACTTGTCTAGTTTGATAAGCTCTCGGTTACTAATCTGTCGTTGTATATGCGTAAAAGGATCTTTTGTCGATCTATAAATAAATTTGTGTCAACAGTTTAAGCTGCATTCAACTGTTTGCGCTGCTATTTGCTGGGAAAATAGTCTGCATGAATCCAATGTTGTGAACTTGTGGTGCCACTAGAAAGTGCTCATCTTTCTGCAACATAAATGCCAATTATCTGAACCTTTGAGGAGTTGGTTTGAGGAGAGGCTGTAGCATTTAGGGTAGTTCCTAAGGCTAACAGTGGAGACGGTGCTCATCTTTTCTACAGCAAAGTTGTCCATTGCCTGAGATGCTGGAAGCTGTAGGTGTTTGGTTAGGCTAGAAAGATGTGAATATAATAGATCGTGGATATCCTGTTATTACGGAGTTTGAGAATAATGCGCTGGAGTTTGGAATAGTTATGCTCAAATAGATGAACTACTGCACTGTGAAATGCATCTTAGTTTGGGTTTTCAGATTTCTTGCCAAAAAAAAAGCATTGCTGTTGTGCATATAATTATTGTTTAAATGGTCCATCTAAATTTATTTTGCACGTCCAATTATTTTGCAGATTTCAACTTCTTAGAGACTTATTGCCTCATAATGATCAAAAGAGAGACAAAGCATCATTTCTCTTAGAGGTAAGAAAGTTTATTGATTGCTTTAGTTGTAATCTGTTTTCTATCGACTATCTTTACTATCTCTAACGATATTTATTTCAATTCAGGTTATTGAATACATACGGTTTTTACAAGAGAAAGTACAAAAGTATGAGGTTTCATACCCGGAGTGGAACCAAGAAAATGCAAAGGTTGTGCCATGGACAAACATCTATTTCCGTTCTTCCTGGAAAAATGCGCAGGTAAGTTTGCTACTAACAAATCTTTACATCTTACTTGTCGAGGCTTATTATGAGGTACTAACAAGACTTCCCTTCATCACATGTTTGCTTTGCAGAACAAAGGCCAAGTTCCTGCAGATCATTCACCTGACCCTCCAGAACTTCTGAAAAATGGTTCCCCCTATATGTTCCCTTTTACAGGGAACTCTGATAATAACAATGCAGTTGAAACTGCAGCTGCTTCAGGTGCACAGGATCAGGCAGAAACTGATCCAATGAGTCGTGTGTCTTACAGATCAGTGGACACTCCCAGTCCCAATAATGTTGCAGGTACAATTTCTAGTCCAACCTAGCTTTATAACTTGCAGGACTTCTGCACTCCTTCATTAGAGTTAGAAACTCTCTCAAGTTTCAACCTGTTTGTTAATGTGTAGACAAAGTTACATCTCAGCCACACGCTCAACTGGTGAGACCATCACCTGCAGAGAATCACACAGTAAACTGCGACAAGTTAAATAATTCTGACCTTGCCATCGATGAGGGAACAATCAGTCTATCAAGCCAATATTCCCAAGAGTATGTACTAATAACGTTTTTTTCTGTAAAAACTGCTTTACCCATCTGTGTCACCATTGTTTACGCATTTCTTTTTTTTCTCTTGTTTCCAATTTTGATATGCAACACCTGACATGCATTTTTTTCCACGAATTTTTTGATGAAGTTGGATTTTGTTTTTTTCGTCCATAACAGGTTGCTTAACAAGTTGAATCATGCCCTGGAAAACTCGGGTATAGATTTGTCCCAAGCCAGCATCTCCGTGCAAATAAATCTTGGCAAGAGGGCTATGAAGAGATCTACTCCTGCTGCAACCTCCACTTCTAAGGTAGGATTTATGTCTCGTATTGACACTAAGAGCCACTACATTATGTTTGTGGTAATTGAAATTGGAGCTGGCAATGGATGTTATACATGGTTTAGTTGTTTTACAATGTTGACTTCGTTGGTTATAACACAATTTGGACCTCCGAGGCAATTCTTGGGCAGCATCAGAGCATTTTTACAATCTGCACAATTTAATCCTTTGACATTGTTATCTGATATGCTATTTACGTTATAGGAGCTCACTGATCCGGCATCTAATAGTCAAGCAATGGGCCGTCAGCTTAGGTTGGGTGATGGCGCTGAAGAACATCGACAAGCCTCAAAGCGACACAAATCAGATAACAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028888

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028888&oldid=35145"