BGIOSGA028901

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Revision as of 08:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028901| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028901, complete gene.| tag = OS08G04...")
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Gene Name

BGIOSGA028901

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028901, complete gene.

LocusTag

OS08G0492400

Ensembl Transcript ID

BGIOSGA028901-TA

Ensembl Protein ID

BGIOSGA028901-PA

Length

5161

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:25964779..25969939

Sequence Coding Region

25964779..25965127,25965330..25966706,25967029..25967211,25967357..25967640,25967725..25967841
,25968267..25968523,25968714..25968894,25969012..25969284,25969745..25969939

Genome Context

<gbrowseImage1> name=IndicaChromosome08:25964779..25969939 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:25964779..25969939 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCTGAATGTTCGTGTGATCGAAGCCCGCAACCTGCGGGCCATGGATTCCAACGGGTTCAGCGATCCGTATGTGAAGCTGCAGCTCGGGAAGCAGCGGTTCAAGACCAAGGTGGTGAAGAAGAACCTGAACCCGGCTTGGGATCAGGAGTTCAGCTTCTCCGTCGGCGATGTCCGGGACGTGCTCAAGCTGTATGTCTACGATGAGGACATGATTGGAATCGATGACTTCCTGGGGCAAGTCAAGGTGCCACTGGAGGATGTTCTAGCTGCTGATAACTACTCGCTCGGCGCGCGGTGGTTTCAGCTTCTTCCGAAAGGCAAAACCGAGAAGGCGATTGACTGTGGAGAAATTTGTGTCGCGATGTCTTTGGAAACAGCTGGTGCCACACGCTCATGGTCCGATGATCTTGTTAGTGAACTAACTGACATACAGAAAGATTATTCTCTATCAAGTCAGGGCACAGGAACATCCGTTGCATTATCTTATCAAGAAAGTGAAGCTTGTCAAGAAGAAAGTGTCAATGGGAATTTGGGCAGAGCTGGTTTCACTGAAGAGGACAACTGTAGTCAAGATACTGACAGAAATCAAACTACTGCAGAGGACAAATCTAATGGGATTCCTGCTGCAGCTTCCACTGGGATTGAAGTTTCTAAAACGGATAAGTCCAATAAGCCATCGTTTGTTGATCGTGTCTGTCAAATGTTTGTCAGGAAAAGCGATGATGTGGTAACTACCCCCTTGGTAACAACTGACAAATCAGAAGATGTTCAAGAAGCAACAACAGGATATGAAGCTCCTGCAACTGGAAGCCAAACTTATAGTGCATCTACAGACACTCCTTTTGATGAACTATTGAAGTACTTTGAATCAAAACATCAAGAAGTTGAAATGCCTGTAGATTTACAAGGAATTCTTGTTGACAAGTCGTACATTACATCGCCTAGTGATCTGAACAATTTTCTCTTCTCGCCAGATTCAAATTTTCGACAAACAGTGGTTGAACTCCAAGGTTGTTCTGATGTCAAAATGGAATCCTGGAAAATTGATAGTGATGGGGAGTCCTTGAAGAGAGTGATAACTTATACAACTGCACCATCCAAATTGGTTAAAGCTGTTAAAGCAACAGAAGAACAGTCTTATTTGAAAGCTGATGGAAATGGATATTCAGTTTTATTGAGTGTTAGCACCCCTGATGTTCCTTGTGGTACTTATTTTCGGACAGAAATTCTTTTCCGTATTTTGCCAGGTCCTGAACTTGATTCTGAGCAACTGACGTCACATTTGGTAATTTCATGGCGCATAAATTTTCTTCAGAGTACTATGATGAAAGGTATGATAGAAAATGGAGCAAAACAAGGGTTGCAACAAAATTATGCACAGTTTTCTGATTTGCTGTCACAGAAGATCAAGCCTATTGATGTAGATGCTGGGTCTGACAAGGGACAAGTCTTAGCGTCATTGCAGAGGGGGCAGGAGTCTGATTGGAATATAGCATTTCTGTACTTCTGCAACTTTGGTGTTTTATGCTCTCTTTTTGTAACCATATACATTGCTGTGCATGTTCAACTAAGGAGTTCAGGTGCACATAAGGGGCTCGAGTTTCCTGGATTAGATCTGCCAGATTCTCTCAGTGAAATTGTCATGGGTGGGCTTTTGTTTCTTCAATTACGACACATCTATAAAAAAATCTCATGCTTTATTCAGGCAAGAGAGCAAAAAGTTGGTGATCATGGTGTCAAGGCACAAGGTGATGGATGGTTGTTAACAGTTGCCTTAATTGAGGGAACCAAACTGGCTCCAGTTGATGCTACTGGTTTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCTCAATCAAGTTCCAAACACTGGAACCTCAGTGGAATGACATCTTTGAATTTGATGCCATGGATGATCCACCATCAGTGATGAATGTACATGTATATGATTTTGATGGACCATTTGACGAAGTTACCTCACTTGGACATGCTGAAATTAACTTTGTAAAATCAAACTTGTCAGAGCTAGCGGATGTATGGATTCCTCTTCAAGGTAACTTGGCTCAGTCCTGGCAGTCAAAGTTGCACCTGAGAATTTTTTTGAGCAACTCAAAAGGATCCACTATGGTTACTGAGTATCTGAGCAAAATGGAGAAAGAGGTTGGCAAAAAGATGACACTGCGGTCTCCTCGAACTAATACTGCATTCCAGGAGCTGTTCTCTCTGCCAGCAGAAGAATTTCTCATCAGCAGTTTTACCTGCTGCTTGAAGCGAAAATTGCACACACAGGGCCATCTGTTCTTATCTCCAAGAACAATTGGATTTTACTCAAGCATGTTTGGCCGGAAAACAAAGTTTTTCTTTTTATGGGAAGATATTGAAGAGATACAGGCAGTACCTCAATCAATATCATCATGGAGTCCATCCCTTGTAATAACTCTTCACAAAGGTAGAGGCATGGATGCAAAGCATGGTGCAAAGAGCGTCGACAATGGAAGGCTGAAGTTTTGTCTGCAGTCTTTTGCATCATTTAGTGTGGCCAATAGGACAATCATGGCCTTATGGAAAGCAAGATCTTTGAGTTCCGAGTACAAAATGCAGATTGCTGAAGAACAATCCCAAAACAATGATACTCTTCAGAGTGAGGACAGTGGAATATTTGTTGGAGTCGAGGATGCAAAGAACCTTCAGATGAACGAGGTTTTCTCCTCCTCGATTTCTGCCAATATGGCCTCACTAATGGAAGTGTTTGGAGGAGGTTCATTTGAGATGAAAATCATGAATAAAGTTGGATGCCTAAATTATTCAGCCACACAGTGGGAATCAGATAAGCCTGATGAATATCAAAGACAAATTCATTACAAGTTCAGCAGGAAGTTGTCTCCCATTGGAGGTGAAGTGACTGGAACCCAGCAGAAATCTCCTATGCCCAACAAGGCAGGGTGGATTATTGAAGAGGTGATGGAACTACAAGGAATCCTTTTCGGTGACTTCTTCACGATTCATATACGGTATCAGATCGAAGACCTTGCTCCTAAACAGAGGGCGTGTAGTGTACAAGTCTTTCTTGGGATTGAATGGTCGAAGACCACTAGGCACCGTAAGAGAATCGAGAAGAGTGTTCTTTCCGGTTCATCTGCTCGCTTGAAGGAGATGTTCATTCTAGCATCGAAGCAGCTGCCACATGCCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MRLNVRVIEARNLRAMDSNGFSDPYVKLQLGKQRFKTKVVKKNLNPAWDQEFSFSVGDVRDVLKLYVYDEDMIGIDDFLGQVKVPLEDVLAADNYSLGARWFQLLPKGKTEKAIDCGEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVNGNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQMFVRKSDDVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQWNDIFEFDAMDDPPSVMNVHVYDFDGPFDEVTSLGHAEINFVKSNLSELADVWIPLQGNLAQSWQSKLHLRIFLSNSKGSTMVTEYLSKMEKEVGKKMTLRSPRTNTAFQELFSLPAEEFLISSFTCCLKRKLHTQGHLFLSPRTIGFYSSMFGRKTKFFFLWEDIEEIQAVPQSISSWSPSLVITLHKGRGMDAKHGAKSVDNGRLKFCLQSFASFSVANRTIMALWKARSLSSEYKMQIAEEQSQNNDTLQSEDSGIFVGVEDAKNLQMNEVFSSSISANMASLMEVFGGGSFEMKIMNKVGCLNYSATQWESDKPDEYQRQIHYKFSRKLSPIGGEVTGTQQKSPMPNKAGWIIEEVMELQGILFGDFFTIHIRYQIEDLAPKQRACSVQVFLGIEWSKTTRHRKRIEKSVLSGSSARLKEMFILASKQLPHAR</aaseq>

Gene Sequence

<dnaseqindica>1..349#552..1928#2251..2433#2579..2862#2947..3063#3489..3745#3936..4116#4234..4506#4967..5161#ATGAGGCTGAATGTTCGTGTGATCGAAGCCCGCAACCTGCGGGCCATGGATTCCAACGGGTTCAGCGATCCGTATGTGAAGCTGCAGCTCGGGAAGCAGCGGTTCAAGACCAAGGTGGTGAAGAAGAACCTGAACCCGGCTTGGGATCAGGAGTTCAGCTTCTCCGTCGGCGATGTCCGGGACGTGCTCAAGCTGTATGTCTACGATGAGGACATGATTGGAATCGATGACTTCCTGGGGCAAGTCAAGGTGCCACTGGAGGATGTTCTAGCTGCTGATAACTACTCGCTCGGCGCGCGGTGGTTTCAGCTTCTTCCGAAAGGCAAAACCGAGAAGGCGATTGACTGTGGTAACTGATGGAAATTTCCCTACTTCTTAATTTGGCACACGAATCTTTTGCTTTGTTCATGTGAATTGAGTGTTTTAAGGTTATAGCGTTGTTCATATTGTTAGCACTACAAACATCTGAGATGTCTGAATCATATGTCGGTTCATTGTGCGAAAAATATGATAATCACTTTTCTTCTTTCTTTCCTGATTTCACCTTGCAGGAGAAATTTGTGTCGCGATGTCTTTGGAAACAGCTGGTGCCACACGCTCATGGTCCGATGATCTTGTTAGTGAACTAACTGACATACAGAAAGATTATTCTCTATCAAGTCAGGGCACAGGAACATCCGTTGCATTATCTTATCAAGAAAGTGAAGCTTGTCAAGAAGAAAGTGTCAATGGGAATTTGGGCAGAGCTGGTTTCACTGAAGAGGACAACTGTAGTCAAGATACTGACAGAAATCAAACTACTGCAGAGGACAAATCTAATGGGATTCCTGCTGCAGCTTCCACTGGGATTGAAGTTTCTAAAACGGATAAGTCCAATAAGCCATCGTTTGTTGATCGTGTCTGTCAAATGTTTGTCAGGAAAAGCGATGATGTGGTAACTACCCCCTTGGTAACAACTGACAAATCAGAAGATGTTCAAGAAGCAACAACAGGATATGAAGCTCCTGCAACTGGAAGCCAAACTTATAGTGCATCTACAGACACTCCTTTTGATGAACTATTGAAGTACTTTGAATCAAAACATCAAGAAGTTGAAATGCCTGTAGATTTACAAGGAATTCTTGTTGACAAGTCGTACATTACATCGCCTAGTGATCTGAACAATTTTCTCTTCTCGCCAGATTCAAATTTTCGACAAACAGTGGTTGAACTCCAAGGTTGTTCTGATGTCAAAATGGAATCCTGGAAAATTGATAGTGATGGGGAGTCCTTGAAGAGAGTGATAACTTATACAACTGCACCATCCAAATTGGTTAAAGCTGTTAAAGCAACAGAAGAACAGTCTTATTTGAAAGCTGATGGAAATGGATATTCAGTTTTATTGAGTGTTAGCACCCCTGATGTTCCTTGTGGTACTTATTTTCGGACAGAAATTCTTTTCCGTATTTTGCCAGGTCCTGAACTTGATTCTGAGCAACTGACGTCACATTTGGTAATTTCATGGCGCATAAATTTTCTTCAGAGTACTATGATGAAAGGTATGATAGAAAATGGAGCAAAACAAGGGTTGCAACAAAATTATGCACAGTTTTCTGATTTGCTGTCACAGAAGATCAAGCCTATTGATGTAGATGCTGGGTCTGACAAGGGACAAGTCTTAGCGTCATTGCAGAGGGGGCAGGAGTCTGATTGGAATATAGCATTTCTGTACTTCTGCAACTTTGGTGTTTTATGCTCTCTTTTTGTAACCATATACATTGCTGTGCATGTTCAACTAAGGAGTTCAGGTGCACATAAGGGGCTCGAGTTTCCTGGATTAGATCTGCCAGATTCTCTCAGTGAAATTGTCATGGGTGGGCTTTTGTTTCTTCAATTACGACACATCTATAAAAAAATCTCATGCTTTATTCAGGCAAGAGAGCAAAAAGGTGCATTTTCCCTCTCATTCAGTTTCGTCATATTTCATCTCTAAAGTGTTGTAACTAAAAAAATCTCTCTGGAAATGCAAGAATTCATGATTAAAGCTCATGCTTATATTTTCAAACAATAATTTCAGATGCAGTTGATGTTTAGCACTAAATTTGTAAAGAAAAAATATTAATTAACTCCACTTCCCTGGCATCGACACATGGTGCTTTTATGTATTTTATTTTCTTCAGAAACATATGAACAAGTACCACAATAATGTGATTTGCATTTCTTGATGTAGTGCTTTTCATTGTTGAATCTTACACTCACAAATGTGTGCAGTTGGTGATCATGGTGTCAAGGCACAAGGTGATGGATGGTTGTTAACAGTTGCCTTAATTGAGGGAACCAAACTGGCTCCAGTTGATGCTACTGGTTTTTCTGATCCTTATGTGGTATTTACTTGCAACGGTAAAAGTAAAACAAGCTCAATCAAGTTCCAAACACTGGAACCTCAGTGGAATGGTATGTGTTTGGCATTACAGTTCAAATTTTTTCCCTTTTAGATGTTTCCCTCTTTTTTTAGGTATATAACTACATGTACTGGATTTTATTATGGAACAAAGGTTCATGGCACAAGCAACTAAAAATTTGTTCCTAAATATTGCAGACATCTTTGAATTTGATGCCATGGATGATCCACCATCAGTGATGAATGTACATGTATATGATTTTGATGGACCATTTGACGAAGTTACCTCACTTGGACATGCTGAAATTAACTTTGTAAAATCAAACTTGTCAGAGCTAGCGGATGTATGGATTCCTCTTCAAGGTAACTTGGCTCAGTCCTGGCAGTCAAAGTTGCACCTGAGAATTTTTTTGAGCAACTCAAAAGGATCCACTATGGTTACTGAGTATCTGAGCAAAATGGAGAAAGAGGTTGGCAAAAAGGTGAGCAGGTTCCTTCCTGTTTCTAAGGAGGTATACTGGTACAGTGCAAGTTTCCTCTAGTCTGATTTGGTTAACTTCTGCCAGATGACACTGCGGTCTCCTCGAACTAATACTGCATTCCAGGAGCTGTTCTCTCTGCCAGCAGAAGAATTTCTCATCAGCAGTTTTACCTGCTGCTTGAAGCGAAAATTGCACACACAGGTACTCCTCAAATTGCATATTGCATGTATGATCACTGAGCTTGTTATTTCACTGTCACTCATTATGAATGAAAATTTGGTGCCAGCAATTTGGGACTTTGGCTGGACCACTTTTATCATCTATAAACATCTGCATTGAAATATATAAGCTAAAGTTCAAGAATCTTTTTGGTGCAACTAGTACATATGTGATTTCAAGTAGTAAACGAATAGTAGATGAAGCCAGTAAATGTCTTCTCTAATTTTTGAGAATCAGGTCTGAGTGCCAAGTCATTGCCATGTAGGAGTGTTATCAGTTAGATTGTTTGTGATCAAATTCTTAGATTAACTTGTCATTATTTGTGAATCTCCAATCCTCATGGGTAATGGGTTCTCTTATGAAGGGTTCAGTCAACTGAGAAAGATTCTTTTTACTTCTGATTGCAGGGCCATCTGTTCTTATCTCCAAGAACAATTGGATTTTACTCAAGCATGTTTGGCCGGAAAACAAAGTTTTTCTTTTTATGGGAAGATATTGAAGAGATACAGGCAGTACCTCAATCAATATCATCATGGAGTCCATCCCTTGTAATAACTCTTCACAAAGGTAGAGGCATGGATGCAAAGCATGGTGCAAAGAGCGTCGACAATGGAAGGCTGAAGTTTTGTCTGCAGTCTTTTGCATCATTTAGTGTGGCCAATAGGTAAATATCTATTTTCTTAAAATACCATGGAGTACTAAATCTTTCCTTTAGCTACATTAAAACAAACCGCCTTAATAAAGAGTTTCTCTGCATTGATCCATATAGTACCTTGAAATCTCCTGTTGCATGGCACATGTTGTTCTTGACAGTTTAAGCTTGTCAGAACAAATAATTATTTGGTTCTTTACAGGACAATCATGGCCTTATGGAAAGCAAGATCTTTGAGTTCCGAGTACAAAATGCAGATTGCTGAAGAACAATCCCAAAACAATGATACTCTTCAGAGTGAGGACAGTGGAATATTTGTTGGAGTCGAGGATGCAAAGAACCTTCAGATGAACGAGGTTTTCTCCTCCTCGATTTCTGCCAATGTAAGTTCACCGAACTATTACAGATCATGACAATTTGAACTTACACCTATATAATCTTGTCAGCTACTTATCATGTAGTTTTATCAGAAGAGCTGAACTGACATAGACTCTTTCCAGATGGCCTCACTAATGGAAGTGTTTGGAGGAGGTTCATTTGAGATGAAAATCATGAATAAAGTTGGATGCCTAAATTATTCAGCCACACAGTGGGAATCAGATAAGCCTGATGAATATCAAAGACAAATTCATTACAAGTTCAGCAGGAAGTTGTCTCCCATTGGAGGTGAAGTGACTGGAACCCAGCAGAAATCTCCTATGCCCAACAAGGCAGGGTGGATTATTGAAGAGGTGATGGAACTACAAGGAATCCTTTTCGGTGACTTCTTCACGGTATGTACATATACTTGAAGCTTCTGTTGGTGCCTCCCTACTCAGCTCGAATGTTTGCTTTTACGCGTTGACATTTGAAGCCAACCCCTCCACTATTACTTATTTGGTGCTTCATATTAAGATAAGCTAGCTGTTGTCCACTTATCACCTGGGAAGTTTAGTTGACCCTGACTAAGCAAAATAGTGCATGCTTATACTAACAGGCAAGTTGACTAAGACTAGCACAATCTAAATGCTACCACTTCCAGAAAACAAGTATAGAAAAAAAAATGCTGTTGAAAAATGAAAACAGGTCGTCAGGTCCAATTATTTATTTAGACAGACTTTTGTTTAAACCAATTTAAAAAGTATTTGTTGAGACATGATTTTCTGTGATTCAATTAGTCATATCATGCTTACTTTCTGCATAGAACCATAACAAACATTGTAAATGATCTGTTCACCTGACTTGTTCTTGCAGATTCATATACGGTATCAGATCGAAGACCTTGCTCCTAAACAGAGGGCGTGTAGTGTACAAGTCTTTCTTGGGATTGAATGGTCGAAGACCACTAGGCACCGTAAGAGAATCGAGAAGAGTGTTCTTTCCGGTTCATCTGCTCGCTTGAAGGAGATGTTCATTCTAGCATCGAAGCAGCTGCCACATGCCAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028901