BGIOSGA028912

From RiceWiki
Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028912| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028912, complete gene.| tag = OsI_297...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028912

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028912, complete gene.

LocusTag

OsI_29728

Ensembl Transcript ID

BGIOSGA028912-TA

Ensembl Protein ID

BGIOSGA028912-PA

Length

4465

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26047055..26051519

Sequence Coding Region

26047055..26047134,26047337..26047396,26048716..26048734,26048793..26049034,26049755..26049938
,26050210..26050429,26050740..26050885,26050991..26051029,26051448..26051519

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26047055..26051519 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26047055..26051519 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCACTGCTTCGCACATACAGCCGGCGCCGTCGCCGTCGCCGCGACAGCCGTCTCAGTCCTACTCGCTCGCGCGCACCATATCAGGAGGAGGAACATGTGGTTGAGACTGCATCTGCAAAAGCGCGCGCCGATCCGCTCTTGCTTGTTCCATATCAGCAAGCAGATGCAGTAGCTCAGGACACCGAGGTCTTGCCACCATCAGGAAGCTGCCTTTCCTCATCTCCGGCATCACACGTCTGGGCCCGACATGTGAAAGATTGGGGACTCATATTTTACATCAGGGTTGATCTTCAGGGATCTTTCCACACATATCCTGATGTGGGTGGGCCATTTCAAAGCTCACAGGAAGCTGACAAGGCTATTGATCGCTATCTTGAGGACCATCGGGATCCAAAAATGCACATAGGGCAAAATGATGATATCTCTTCAATGGAGAATGTTATACGGCGATGCCTTTACTGGCCTGATGGCACAATTAAGAGGCGTACAAAATCATTTGCGACTTGGGAAGCCAAAAAGAGAATGCACCAATTCATCCAAGCATTAGTGGACAAGTATAATGATGATCACAATCTTTTGGGGGATTTGGCACTTAAACTCAAAGACGTTTTGCACTACCAACCACTTTGTGAGAACCATATGTGGTACTATCATCTCAATTTCACTGCAAAGACTAAAGAAGATGATGGTTTCGACTCTACTAGTGACAATCTGTTCTTTGTGGAAGTCAAATGTATGGGAAAAGGAAATTATGAAGAAATGGTGGTCAGCTGTTTCTGCGTGATTAATCCTATTGATAATGGTAAACCATGTAAAGGTTGTACCAACAATGGAACTGCTGACATGAAGCACCCTGACACTGGTGAATACTTTGCTGGTCACTTGGATGCATATTTGCCCTATGGATGTTTTGGACAGTGGAGTGACTCTGACGACGATGATAAATACGTGAAAGCCAAGGAGGCTAAGTTAAGGCGTATGTTCAAGGGCCTTGATGATCCACGTGTTACGGAGAAAATATTCACACTCCCTCCGGGTGTGACTATTGTGGAAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MPLLRTYSRRRRRRRDSRLSPTRSRAPYQEEEHVVETASAKARADPLLLVPYQQADAVAQDTEVLPPSGSCLSSSPASHVWARHVKDWGLIFYIRVDLQGSFHTYPDVGGPFQSSQEADKAIDRYLEDHRDPKMHIGQNDDISSMENVIRRCLYWPDGTIKRRTKSFATWEAKKRMHQFIQALVDKYNDDHNLLGDLALKLKDVLHYQPLCENHMWYYHLNFTAKTKEDDGFDSTSDNLFFVEVKCMGKGNYEEMVVSCFCVINPIDNGKPCKGCTNNGTADMKHPDTGEYFAGHLDAYLPYGCFGQWSDSDDDDKYVKAKEAKLRRMFKGLDDPRVTEKIFTLPPGVTIVED</aaseq>

Gene Sequence

<dnaseqindica>1..80#283..342#1662..1680#1739..1980#2701..2884#3156..3375#3686..3831#3937..3975#4394..4465#ATGCCACTGCTTCGCACATACAGCCGGCGCCGTCGCCGTCGCCGCGACAGCCGTCTCAGTCCTACTCGCTCGCGCGCACCGTATGTCTGCCTCTCCCTCTCCCTCTCTCTCGATTACTATTTGTTTTCTGTTTCGGTTCGGAACGATCCAGTCGAAAGTCGAATCGTTTTGTTTTATCTGTTGCTTGGATTGGATTGAAATTACGTATATAGACCATCCTAATTTTGTTTTCTTTGGCGACAATTTCTTCACTCATCTTCGCTTGAAATTGTTACTCTTCAGATATCAGGAGGAGGAACATGTGGTTGAGACTGCATCTGCAAAAGCGCGCGCCGATCCGCTGTATGACCACCGCAGTCCTTCTCCCTTATCATTCTTTTTGTGTTGCTGATCTAGTCCAAGGGTATACTTAGGTCTTTTTCTGTTGCTGATCTAGTCGAAGGTTATACATAGGCCAAATGGTTATGAAGGGTCTTGCTTACTTGATTTGGATTCTTGGATGGTTAGGGAGAGAGGGCTTACTTGATTTTGATTCTTGGATGGTTAGGGAGAGAGGGCTATCGTATTGATCTCTATGTATTTCAGTCCGATATAGTTACCAGAAGATTTTTTTGTCCTACACCATTTTTTCTGTACAAAGCTAGGAAATTCTTTTTCTTTTCCTCGTGGGGCTCTATCAATCCAACTTCGAATTATGAATGCATTTTCTACATTCCTCAACACTGTTTTTTTCATTAATAATGAATGTTACTCCCTCCGTCCCATTTACAGGGTGTGATATTTTTTTTATATAAGACCAAGAAAACTGGTCGTGAGGAAAACAAATACTCTCTTACCCCTAATAAATCGCAAGCATGCAACAATTGATTCATGGCATGCATGCAAAAATTCTGTTGGTAATGCATATTTGATTTGCGCAACTAATTAGTTCTTCCCATCTTCCCAAAGCATTCAACGGTGAGTGCAAAAGGATAAGATCGTGCACCCTCTGTTTTGGGACGGCATAGAAAAAAAATGTGCGCCCTCTAATCTGCGATGGAGGGAGTACAAGTGACAACTGTTATCACTAGTTTTTCTATACTCTGATTATGGTGGTTTGCTGTTTCTCAGTCTGATCCAAATCATGGATTTAGCTTCAATTTGTAGGAACTGCTTTTATGAATTTATAGTTATGCATGATCTATCATGATGACATGTTGCATGCCAAATTGAAATGACACCATAACAGTTAGGCATGAAAAATTTATTTTGACACTGTAAATTGTGTATTGGGTAAGTGTGATGTTCTGCATTGCAGCCTATTAGTTAGTTTGTATAATATTCCCGCTGTGGATTAGCCACTTATGTTCTTCTCAAATATGGTAATAGGCCAGTAAGAATACCAGAGATATGAAACTGACAAAATGGTCATTGAATGGACAGCTGGCATCTATGAGCCTATTTATGTTTTCTGTGCCTTTTAGTATGCTTTCTTGTTGACAAACCTGATTCATAGGCTTTTAACTGTGCCAAAAAAATATGACTTTATGCCTGCGAAATGTGTGGCAAAATATTTCCTATTTTAGATAGATAGTTCCTTCAACTGTCATCTCACCGTGGTAATATGCCTATGGTTTTTATGTCTCCTAAGATAATAATAAATTCTTCTTCTACTCATTTAGCTTGCTTGTTCCATATCAGGTATGCAAAGGAGGGGCATGTGCCATCTTACATCGCTGCTACTTCCTCATCCTGTCAGCAAGCAGATGCAGTAGCTCAGGACACCGAGGTCTTGCCACCATCAGGAAGCTGCCTTTCCTCATCTCCGGCATCACACGTCTGGGCCCGACATGTGAAAGATTGGGGACTCATATTTTACATCAGGGTTGATCTTCAGGGATCTTTCCACACATATCCTGATGTGGGTGGGCCATTTCAAAGCTCACAGGAAGCTGACAAGGCTATTGATCGCTATCTTGAGGACCATCGGGATCCAAAAATGTAAAGTTCCTCGACTGCTATTTAGATTTTTATTATTTCATTTCTTTTGTTTGATGTGTATGCTTGCAGCTGATTATATTCAAACAAGGATACATGGCTGATGCTATAATAGTATAGGTGATGGAACATAATGCAGTTTTAAAAGTATGAATCATGATAACGACGAATGGCCTTTAGTTAAACTACATATAAATTGACACATTGATTAGAAGAAATACAAGCATATGTTAGTTTTTAAAATTCTTGTTTTGAGAGTAATTAAAGTTAATGGAAAATTTTATAACTGTATTTCTGTGGGAGTTGCTGAAATAGCACAAGTCATTAGCATAGCTGAGAATTATGAAGTGCATATAGATGTTATGAGACCACTTTGTATGTAGCTATATTTTTCTTTTAATTGTAATTTATATGATTGGTTAGCCTTTCCTCAGCAGTAAAGAAAAAAAAGATTTCCTAACAATAGGTTCCAAATGAGCTTGGGGTCTAGAATAACAGAAGGGATATCTTAAAAAATGCCTTGGGAACAGGCTTGTAAACAGTCATTTCATTCTTTTGTTTCGGTTTCTGTTACCACCTTAATCTATTTTAGAGGGTCACTTGGGAGCTTTTGATGCAAGCTAGGACTGATAACATTGAATGAGTTCTTGGTATTATTTTGTGTTCTCCATTTTTTAGGAAGTACAATCCACTAATCGTATCGGATGCTCTGATTTAAACTAGGCACATAGGGCAAAATGATGATATCTCTTCAATGGAGAATGTTATACGGCGATGCCTTTACTGGCCTGATGGCACAATTAAGAGGCGTACAAAATCATTTGCGACTTGGGAAGCCAAAAAGAGAATGCACCAATTCATCCAAGCATTAGTGGACAAGTATAATGATGATCACAATCTTTTGGGGGTTTGCTTTCTCTCTATCTCATTCTCTGTCCTTCTGCCTTGGTTGCACTGTCTTATTTATCTTATTATGTACTCCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTCATACATATGTTAATGAATCTATACACTTATGAATCTATACACTTATATGTCTAGATTCGTTAACATCTATAAGAATGTGGATAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTAGGATTGCCTATCTGATCCATCCTTTTTATTTTAGGATTTGGCACTTAAACTCAAAGACGTTTTGCACTACCAACCACTTTGTGAGAACCATATGTGGTACTATCATCTCAATTTCACTGCAAAGACTAAAGAAGATGATGGTTTCGACTCTACTAGTGACAATCTGTTCTTTGTGGAAGTCAAATGTATGGGAAAAGGAAATTATGAAGAAATGGTGGTCAGCTGTTTCTGCGTGATTAATCCTATTGATAATGGTATAGAGTACTTCTATCTTAATAAAGTATTGTTAAATTACTGTTGGTCTCGCTACCTTGAACTTATTTGCGATATATACTTGTAAATGTTTTTTTTTCTAACGGTAGTACTGTACTATAATTTTACTGTATTTATCTGTTTGTTTCCTCTTGTGTCATTTCATCCATTATCAATATCCTTGTATATATTTGTAATATATTTACTTAAGTTAATCACACATTTTTTTATCTTCAATTATTTGATTACTATTGGGTGTGTGTATCTGGTTGATTACTTGGCAATTAACTGTCCTTTTCTTTTGAAATTAAGGTAAACCATGTAAAGGTTGTACCAACAATGGAACTGCTGACATGAAGCACCCTGACACTGGTGAATACTTTGCTGGTCACTTGGATGCATATTTGCCCTATGGATGTTTTGGACAGTGGAGTGACTCTGACGACGATGATAAATACGTATGTTGATTTTGTCTGTTGGCAAGCTTACCATTTTTGTTGCTTAAGAGTTTAATTATAGTTTTTTAGGGAAATTTAATTACATGAGTTTCCCCTCTTTTACAGGTGAAAGCCAAGGAGGCTAAGTTAAGGCGTATGTTCAAGGTAATGTCATGTTTTTTTTTTTTTTTTTTGGAGTTGGGGGGGGGGGGGAGATAATGTAATGTTTTTGTGAGGGATGGTACCTCTACTACCTTCGTTTCAGGTTATTAGATGTTTTGACTTTGGTCAAAGCCAAACAGCTTCAAATTTGACTAAGTTTGTAGAAAAAATAATAACATTTTTAACGCAAGACAAATTTATTATGAAAATATATTCAATTATTGATTTAATGAAACTAATTTGGTATTATAAATATTACTATAGTTGTCTATAAACTTAGTCAAACTTGAATTTGAAGTAGTTTGACTTTGACCAAAGTCAAAACGTCTTATAACCTAAAACGGAGGGAGCACTAATGGAACGTTCGTCAACTGGTTACTTCATTATTATAACTCCCTCCTTGTGTATTTGTTGTCTTTAGGGCCTTGATGATCCACGTGTTACGGAGAAAATATTCACACTCCCTCCGGGTGTGACTATTGTGGAAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028912