BGIOSGA028947

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Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028947| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028947, complete gene.| tag = OJ1506_...")
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Gene Name

BGIOSGA028947

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028947, complete gene.

LocusTag

OJ1506_F01.14

Ensembl Transcript ID

BGIOSGA028947-TA

Ensembl Protein ID

BGIOSGA028947-PA

Length

3841

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26483180..26487020

Sequence Coding Region

26483180..26483784,26484678..26484789,26484880..26485051,26485134..26485330,26486552..26486626
,26486997..26487020

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26483180..26487020 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26483180..26487020 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGTCCGACCAGGAGCTGGCCCGGTACGTGGAGTCGTTCGTGCGCCAGGCGGCGGCCGTCCCGGGCGCCGTGGCGGCGGCGGGGGGCATATCGGCGGAGTCCGTGGCGCGCCAGCTCGGCCCCCAGCTCGGCCTCGACCTCACCCCCAAGGCCCCCCTCATCCGCGACATCCTCCTCGCCCTCTTCTCCCCCCCGCCGCAGGGGGCCCCCTTCACCTCCTCCGCTCCCTCCCCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCGCTGCTGGCCACTTCTTCTCCCAGCAGCAGCAGCAGCAGCAGCTGCAGACGTTCCTGACGGCGTCGCAGCAGTACCAGCACCGCGGCGGCGCGGGGGCCGCGGCGGCGCCACCGTCGGCGTACGGCGTCGCGGCGGCGGCGGCGGGGTACAGGTACGGGCAGCCGTTCCCGCAGGACGAAGGGGCGCATCTGCAGAGGCTCGTCCAGATGCATCATCACCAGCAGCAGCAGCAGCAGCAGCAGATGGCGGCGGCGGCGGCGGGGGTGGCCGCTGCGCCGCCCACGGCTGTGGAGAGCCCGCGCCCCGCGGCGGCATCGAAGAAAGAGAGTGCAAGTACTGGAGTAAAGAGAAGAGGTGGTCCAGGTGGGCTAAACAAAGTCTGTGGTGTTTCTCCTGAGCTGCAAGCTATTGTTGGTGAACCAACCATGGCTAGAACTGAGATCGTTAAGCAGCTTTGGGCATACATTCGCAGGAACAACTTGCAGGACCCAAACAATAAGAGAAAGATTATCTGCAATGATGAGCTGCGTCTAGTCTTTGAGACAGATAGCACTGATATGTTCAAGATGAACAAGCTTTTAGCTAAGCATATTAGACCACTTGAGGCAAAAAAAGATTCAAATCGAGATTCAAAGAAGTTGAAGCCTGTCGACAGCGAACCCATTTCTCCTGCTGAAACTGATGTTAACCAGCTTCCGATTATCTTGTCTGATGCTCTTGCGAGCTTTTTTGGGACTGGAGAGAAAGAGATGCCCTCGTCTGAGGCTGTTAAGCGTGTTTGGGACCACATCAAAAGCAATAATTTAGAGGATCCAGCAAATCCCACCATGATATTGTGCGACTCAAAACTTAAACAACTCTTTGGATGTGAAAGTCTAACTGCCATGAATCGTCTTACTGGACTCTAG</cdnaseq>

Protein Sequence

<aaseq>MLSDQELARYVESFVRQAAAVPGAVAAAGGISAESVARQLGPQLGLDLTPKAPLIRDILLALFSPPPQGAPFTSSAPSPSASASASASASAAAAGHFFSQQQQQQQLQTFLTASQQYQHRGGAGAAAAPPSAYGVAAAAAGYRYGQPFPQDEGAHLQRLVQMHHHQQQQQQQQMAAAAAGVAAAPPTAVESPRPAAASKKESASTGVKRRGGPGGLNKVCGVSPELQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDSTDMFKMNKLLAKHIRPLEAKKDSNRDSKKLKPVDSEPISPAETDVNQLPIILSDALASFFGTGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTAMNRLTGL</aaseq>

Gene Sequence

<dnaseqindica>1..605#1499..1610#1701..1872#1955..2151#3373..3447#3818..3841#ATGTTGTCCGACCAGGAGCTGGCCCGGTACGTGGAGTCGTTCGTGCGCCAGGCGGCGGCCGTCCCGGGCGCCGTGGCGGCGGCGGGGGGCATATCGGCGGAGTCCGTGGCGCGCCAGCTCGGCCCCCAGCTCGGCCTCGACCTCACCCCCAAGGCCCCCCTCATCCGCGACATCCTCCTCGCCCTCTTCTCCCCCCCGCCGCAGGGGGCCCCCTTCACCTCCTCCGCTCCCTCCCCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCGCTGCTGGCCACTTCTTCTCCCAGCAGCAGCAGCAGCAGCAGCTGCAGACGTTCCTGACGGCGTCGCAGCAGTACCAGCACCGCGGCGGCGCGGGGGCCGCGGCGGCGCCACCGTCGGCGTACGGCGTCGCGGCGGCGGCGGCGGGGTACAGGTACGGGCAGCCGTTCCCGCAGGACGAAGGGGCGCATCTGCAGAGGCTCGTCCAGATGCATCATCACCAGCAGCAGCAGCAGCAGCAGCAGATGGCGGCGGCGGCGGCGGGGGTGGCCGCTGCGCCGCCCACGGCTGTGGAGAGCCCGCGCCCCGCGGCGGCATCGAAGAAAGAGAGGTGGTGCCTCCCACGCTTTGTTTTTCCTCTTCGATTTCCCATACCTTCGCTTCGAGTTAGGGCTTGGATTAGATGTTCTTTTAGGTTCTCGCTCCGATTTTTCAGATTTGGTTGGCGCATTGAGGTTAGGTCAAGACTAAAAACGCTACTACTAGTTTTTTTTTTCTCTTTAACGCTCACAAAGTTCTTGATGAGTTTAATCTTTATTACTACTGTGGATCGAGATATTTATCACGATGATTTAGTGGGGGTGGGGTAATCTGGAAGGAACTGGTTTCCGAGCGATTCAATTGGTTTGCCTGCTTGTACTACATCTTTAATGTCCACGGACGCTTGTGGAATCACTTCTAGTGTACTTGAGAAAATCTTTGAATACTGCCGTAGGGATGTCAACCATACCAGCATAATTAATGCCTCTGAACTTGTTGGGGGGCAATAATGGATCCCGTCATTCTCCTCAAAATGATTGCCATGCAAGCAACCTCCTTTGGCCTAGAAACTAAGAATCGTAACGATAAAGTTCATTGTGCTAAACAAATGGATTTTCCATATTATTTCATCTGGAAACTGGAATTTAACCTCCAGATCATATTTATCATGTTTGTTTACTCCACTTGATTAACTTCCAAATCATATTATTTGTGTTTACTTCATTTAGATTGACTTTCAAAAAAGGAACTTCTCTTAGATTTGCTATTTGGCATGTGCTTGTTCAGACATAATGTCCAAGAAGCATCAGTGTGTCTTTATGGAAGAATGTTCCTGATATGAAATCCGGTGTACAGACTATGAGAGAGATAAATGTGCCCTTATCTTGCTAAATGCTAGCATATTTTACTGCTCGGTCTATTCATTGAACCTTTTTTTTTTCCTTGGTCGTGTTTACGAACCAGTGCAAGTACTGGAGTAAAGAGAAGAGGTGGTCCAGGTGGGCTAAACAAAGTCTGTGGTGTTTCTCCTGAGCTGCAAGCTATTGTTGGTGAACCAACCATGGCTAGAACTGAGGTTTGTTCTGCTGGCTCACCTCTCTAGTGAATTATCTTGTATTAACTATTACATCATGTATGAAACCCTGACGTTGTGACTCAACTGCAGATCGTTAAGCAGCTTTGGGCATACATTCGCAGGAACAACTTGCAGGACCCAAACAATAAGAGAAAGATTATCTGCAATGATGAGCTGCGTCTAGTCTTTGAGACAGATAGCACTGATATGTTCAAGATGAACAAGCTTTTAGCTAAGCATATTAGACCACTTGAGGCAAAAAGTAGGTCTTCTTCACTCTCCAGCTATGTTCTGCAAAATAATCAAGCTTTTGTTTGTGGAATAAGTGCTCAAAATTCTTGCAGAAGATTCAAATCGAGATTCAAAGAAGTTGAAGCCTGTCGACAGCGAACCCATTTCTCCTGCTGAAACTGATGTTAACCAGCTTCCGATTATCTTGTCTGATGCTCTTGCGAGCTTTTTTGGGACTGGAGAGAAAGAGATGCCCTCGTCTGAGGCTGTTAAGCGTGTTTGGGACCACATCAAAAGCAATAATTTAGAGGTTAGTGATTATTACCAAACTTTTGTGTATTACATAGTTCTCATCATCTCATTTGAATTTGTTGTGCTATAATAAACTTGTGGTCATTTCAAATGTCCAAGCATGGAGAACTACAACAGGCAATGCATATTTCAGTTATAAACGAGTACCTAAATTGTGTTTTAGGATCAAAGCATATCAAGTTGATGTGAGGTAGTTAGAACTAAGAACTACTTACTAGGGAACAAATGTAAGTGCTAAGATAAGGATAATAGTGCTCTTTAATTTCGTATCAATGCTGTTATATGCCTGTAGATTTTTCTGATCTGTTTCATGAACTGAATTTTGTATACTGGATGCCCTTCTTGGTCTATTTTGATTTTCTTGGCAGATCTCTCACTTTCTATTCTCTCTTTTAGTTTTTCTTTTGTTTGTTGGTTGGTAGAATGGTTGTTGGTGGTTGAACAACTAGATGCATATGGTGGTTGTATCGGATATAAGTTGTTGGGTGTATATTCCCATGTGCTTTTCATTTTTGAACTCAGAACTGGTACATGGTGGTCAATATAATTTTGTATAGATTATCATACCTTATATAAAATCCAGTGTAGCCATTTGCGAGGATTTCGCAAGTTGCTTCTGTGTGCAAGTTGGTTTATTATATCTTTTGACCTTTGACAGGAGTGAAGCATAAGCAAAGCATGTCCCATTTAAGTCACTTTCCTCCTTACTTTAGTGTCCCATTCATAGCTAAATACTAGTGGTTTGCCACCTAAGAAGGTAATGAATGATAAATCATAGCATAAGCAAAATCTGAGTATACGTATTGGCTGCTCTTAGTTTGTGGTCTATTTTATCCATCATGCAAAAGAATTCGCCACTTCTAGTTTCTCCATATTAGTTTGTTTTGCTGTTCATGGAGATGGCCCAGTATGGTAGTTATTGAAAATCTGCCTGTTGGCATAGCTAGATGAAGACAAGAGGTTGCTGCTAGGCATTTATAGGTTGGATTTTTCAGTCATCTGGTTAGCAAGAGATTTTATATTATCCATCCAGGATTTCATTAACATAAACTATAATGTATAAATTGCTTTTGCTTATATTTGTGACTTCTCTTCCTCACTGAAGCCATTTTCAATGTTCTCTGTAAAGCACACAAGAGATCCTTGTATCTTGCTGTTCTAGTTCAATTAAACTACTGCGGATTCAGTCTTATATCTATCTTGCTTGATTTTGTTGCAGGATCCAGCAAATCCCACCATGATATTGTGCGACTCAAAACTTAAACAACTCTTTGGATGTGAAAGTCTAACTGCCGTGAGTGTTTCGGAGTTGCTGTCACAACACCTTTTCAAGCAACCTAACAAGCTCTAACTGGTTAGTTATTTCCTTTCAGAACAACATCATGTATTGAGACTTGCACTGGTTAGTGTTTGCTAGATGACATCCATCCCTGCTTGCAACTCCTAGTTAGTATAGGAAGATGTTGAACAATATCAGAATTTTTTAAAGTAACTGGATCTGCTCCTTCCCTGTTTGTTCCTTGCACCGAGTTCGCACCTTAATTTTATTATAATGGCTCTTAGGTGCTGGAAACTACTCAATCTATTTCATCTATAGCAAGGTGTTATCTTGCATATCTTATATGTTAAGGCAGAAGTTGATGGTGTTTTGTTTTGTTTTGCAGATGAATCGTCTTACTGGACTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028947