BGIOSGA028949

From RiceWiki
Revision as of 08:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028949| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028949, complete gene.| tag = OJ1506_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028949, complete gene.

LocusTag

OJ1506_F01.22

Ensembl Transcript ID

BGIOSGA028949-TA

Ensembl Protein ID

BGIOSGA028949-PA

Length

5642

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26511457..26517098

Sequence Coding Region

26511457..26511607,26512109..26512402,26513168..26513283,26513393..26513891,26514847..26514888
,26514990..26515280,26515407..26515546,26515892..26516384,26516788..26517098

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26511457..26517098 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26511457..26517098 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACGAGCAGCTGGGGTGGTGGTGGTGGTGGTGGCGGTGGCGCCGTGCGGCTGTGGTGCTGCGGCCTCCTCCTGATGCTCCTTTCAGGCGGAGGCGGGGGCGGAGGCGCCGCCGCGCAGAGGCCCCCGGCCTACAAGACCCTCTCCGGTAACGCGCCCATCGTCATAGCTGAAGGTGGCTTTTCAGGAGTGTTTCCTGATTCCAGCAAAAATGCCTACGTTTTTGCCTTGTCTTCTACCTCGGGTGACACCGTTTTGTGGTGCAATGTGCAACTAACCAAGGATGGTGTCGGAATTTGCCTCCGGGATTTACTTATGGACAACTGCACCAGTATAAGCCAAGCTTACCGAGCGGGAAAGAAGGCATACCTTGTCAACGGCGAAGAAAAAAAAGGATGGTTTCCTATTGACTATACCATGTCTTCGCTGCAAAGTGTTATCTTAACACAGGCAATTTGGTCTCGCACCGACAAGTTTGATTTTGCATTCCTTCCCATTCTTCCTGTTACCAATGTGATAGATTTGGCCAAGCCATCTTCTGTTTGGCTGAATATTGAGCACGATATTTTCTACAGACAGCATGGTTTGAATATGACAAAATACATCCTTTCAATTCCGAAGGGTGGTTCTGTGCAGTATATCTCATCACCTGAATTGGGTTTTCTCCAAAGTATATCAGGAAGAGTTAATCGCAAAACGAAGCTAGTGTTTCGTTTTCTTGATGCAACCAGTTCTGATCCTTCTTCAAACCAAACATATGGTTCTCTGTTGAGTAATTTGACATTTATTAAGACTGTTGCCTCTGGTATAATGGTTCCCAAGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGAGACCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAATGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTACTCAACGGCAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MTTSSWGGGGGGGGGAVRLWCCGLLLMLLSGGGGGGGAAAQRPPAYKTLSGNAPIVIAEGGFSGVFPDSSKNAYVFALSSTSGDTVLWCNVQLTKDGVGICLRDLLMDNCTSISQAYRAGKKAYLVNGEEKKGWFPIDYTMSSLQSVILTQAIWSRTDKFDFAFLPILPVTNVIDLAKPSSVWLNIEHDIFYRQHGLNMTKYILSIPKGGSVQYISSPELGFLQSISGRVNRKTKLVFRFLDATSSDPSSNQTYGSLLSNLTFIKTVASGIMVPKEYIWPVTTNNYIQPAKSIVRDAHSAGLEIYASDFANDRIIPYNYSYDPLEEYLHFVGSDNFSVDGVLSEFPLTAAAAIGCFTNLNVSSKTDHGSPLIISHNGASGDYPDCTDLAYQKAVDDGADVIDCSIQMTSDGVPVCMSSINLFETTNVQRTPFSNRASIFKDIQPTPGIFTFNLTWADISSSDLRPKISSPESIYYLVRNPVHKNAGNFFRLSDFLTFAKDKDLSGIMIIIKNAVFMANSLGFDVVDSVTKALSDAGYNNQTTKAKEVMIQSEDSAVLVNLKQLETKYKLVYTLPSTIGDASASSLVDVKKFADAVIVDRESIFPESQGFIMKETNLVKDLRSAGLAIYAQVFRNEFVSPPWDFFSDVTVEINSYVQSVNIDGIITDFPKTVRRYKMNSCTGLGVNMPSYMNPAEIGGLAQLLNGSQAQPPALAPMPVLNSSDVTEPPFPSAAPKNAPGGAANGSTPAPGASPSGSQAAAVMRAGILPMVTALFASLLI</aaseq>

Gene Sequence

<dnaseqindica>1..151#653..946#1712..1827#1937..2435#3391..3432#3534..3824#3951..4090#4436..4928#5332..5642#ATGACGACGAGCAGCTGGGGTGGTGGTGGTGGTGGTGGCGGTGGCGCCGTGCGGCTGTGGTGCTGCGGCCTCCTCCTGATGCTCCTTTCAGGCGGAGGCGGGGGCGGAGGCGCCGCCGCGCAGAGGCCCCCGGCCTACAAGACCCTCTCCGGTAAGCTCTGCTGCCTCCTTCCCCGGTGGCGTGCGGGGAGAGGAGGAGGGGGAAGGGGAGGGGGAGGAAGGTTCTGGCAATCGGCCTTTGAACCTTTCCTCTTGTTTTTGTTCTGTTTCCCTTTTCTCCACGGCATTCAACGACTCTGGTTTGAATGGGTTGGGGTTGGGGTTTTTGCTTTTGAGTTGATTCGTATTATATAGGATTTCTAAGGAGCAATTCCTTTTTCCATGGCTGGAAATCATGTGAGCAGAGCAGCAACTGAGCATATGACCTGGAAATTGTTAGGAGTTTCATAATAAGTTGAGAAATCGCTGCACCGCGCCGGGTTAATTAATTGTTTCTTGTCCTTTTTATCTGCTTAATTACCGATCATTACTTACAGCTCTGTAACTGATAATTATTACCAATTAAAATTATAGTTCTTGGTGTGTTTATGGGTTCTTGCTATTGATGTGTATAGCCTGAATTGAGCAAACCATTGGGCATTTGCTATTGCAGGTAACGCGCCCATCGTCATAGCTGAAGGTGGCTTTTCAGGAGTGTTTCCTGATTCCAGCAAAAATGCCTACGTTTTTGCCTTGTCTTCTACCTCGGGTGACACCGTTTTGTGGTGCAATGTGCAACTAACCAAGGATGGTGTCGGAATTTGCCTCCGGGATTTACTTATGGACAACTGCACCAGTATAAGCCAAGCTTACCGAGCGGGAAAGAAGGCATACCTTGTCAACGGCGAAGAAAAAAAAGGATGGTTTCCTATTGACTATACCATGTCTTCGCTGCAAAGTGTTATCTGTAAGTGTCAACCTATTATTTTTTCAACTCTTCTCCAGGGTTCACCGTTTAGGACCGAAATTTCGGGTTTACCCCTGGGTCCTGGTAGTATGTGCCTCTGATGTTCAAGTTTTTTTAAAAAGAAATTCCCTTTGATCACCAAAACACATGATGGTTTTGCCTCTTAGCTCTTCACATAGACATAGGCACTATATGCTTTGACCGAACTATCACACCATTATGATATTAAAACAGTATTCATGAAGCAATGCACTATTTGGCGTACCTATCATAAAACTGCATGTGTGATGATCTTCTGTTAACTAATGACTCTGATCAACCAAGAAAACCTGTAAATGACGCATGGTAATATTTTTTTTAGGGTGACATATGGTAATTTCTGATCATTGTGTCAATTAAGAAATCTCCCTGGTCTCTTCATTATAACAGCATGGCACAAAAGATACCGAAGTCATTTAGCTCCTCCAGCCACCTTAGCAGCATCAGCTTTCACGTCATACACTGATGTGTCCAGGCCACACTGTGCAGAAATTACCATTTGTAGTTAGGTGGGATCAGTTGGTTAGATTGTGTTAATGACGAGAACTTTTAAAATGTATTTCCGCAATAGGTATTCCACACAATGTGTATTTTGGCTAAAGCACGTGTAGAATTTACTCTGATTTTGATTGGATGATGAAATTCCTCTCTTGAAAGGTGTGATGTGTTGATGTGATTTGTTGCTAACCTGGTATACTTCTGTACTCTTTTTATGCCATTGAACAGTAACACAGGCAATTTGGTCTCGCACCGACAAGTTTGATTTTGCATTCCTTCCCATTCTTCCTGTTACCAATGTGATAGATTTGGCCAAGCCATCTTCTGTTTGGCTGAATATTGAGGTTGACCTACTGCTCTTGCAACTTGAACTTGCAAAAGTTGTTGTTGCTACTTGCTAGCTGTTCATGACTTTGAGTTCCATAGAAGCTAATTTATCTTTCATTCGTGCAGCACGATATTTTCTACAGACAGCATGGTTTGAATATGACAAAATACATCCTTTCAATTCCGAAGGGTGGTTCTGTGCAGTATATCTCATCACCTGAATTGGGTTTTCTCCAAAGTATATCAGGAAGAGTTAATCGCAAAACGAAGCTAGTGTTTCGTTTTCTTGATGCAACCAGTTCTGATCCTTCTTCAAACCAAACATATGGTTCTCTGTTGAGTAATTTGACATTTATTAAGACTGTTGCCTCTGGTATAATGGTTCCCAAGGAGTACATTTGGCCAGTGACAACTAATAACTATATTCAGCCTGCCAAATCAATTGTCAGAGATGCCCACAGTGCAGGTTTAGAAATATATGCTTCTGACTTTGCAAATGATAGAATTATTCCGTATAATTACAGCTATGATCCGTTGGAAGAATATTTGCATTTTGTTGGTAGTGATAACTTCTCTGTTGATGGAGTATTATCTGAGTTCCCACTCACTGCAGCAGCGGCTATTGGTAAGATTCTATCATTATTACTCTAATTACTTATCAAAGTTGGAAAGTTCATCAGTACTCCTCTCTGTAAAAAGTTAGTGAATCTGCAAGCAAAAAAAATTACTAAGAACAAAATTTGTCAATGGATGCTTGATATTTGTTTGATAAGGAACAACACTACTTTCATAGCTTTATACCTAATAATTGGTCACCACCAAAATACTGTGGTTCGTTTGCTCTACTGAAAACTACATAAGCCGATTGGTCAAAAAATGATCATTCAATCCTTTTTCTTTTGGAAAGGAGATGATCATCTGATTTAGTTCTTTCTTTTGTAGTTAGATACTTTACATAAGATCTTGACTGCAAGTAGAAGAAGAATCTAGGATTGTTGACTCAAGTGCTTGCACATGGGAAATTTCTTTTTATCCAGGGGTTGGGTCATTGTTAGCCCAATATAACCACCACAGTTACTGATTTTCCCCTTATCCTTAATGACCAACTTTTCTTTATTTTTTTTAAACATTCTTACAGAGGAGCACAAAGTACGTCATATTGAAGTTTCATCTACAGCATGTCAGTTTTACCATTATAAAATTAGATTCTATCCTCGATATGTTTTAATTTTGTGCTTTTTGGAGGAGCACTGAAGCATTTCCCTGATTTGTAATATAGAGGAATAAATTGTAAAGTTGAATGGGTGATCATAGATAACGATGATCATTGCATCACCAGCATATTTGGCACTGTCTATCATGTAATAATATCCATAAAGCATGTTTGGTTTGGATTCTATAATAATAAAAGGCTATACAAACTTACGTCCTAACTGATTGAAGATTGGATAATTTATGCCTTTTCTGCCCATATACTAACTGATTGCCTTGTACTTCCACCAATCACAATTATGATGCTTTCTTTAATTGTTTGGTGAAGTAGAGTAATAATTAATGCATTTTAATCTCTATGTCTGCAGGTTGTTTCACTAATTTGAATGTAAGCAGTAAGACAGATCATGGTATGTTTCATTTGGGTGCCAAACCTACTGTACAGTAAGACCCATGTTGCTTGATACCCAGAAGTTCTACTTGATCTAATTGCTGTAGTGTTTCTATACAGGGAGCCCATTAATTATCTCGCACAATGGTGCTAGTGGAGACTACCCAGACTGTACGGATTTGGCTTATCAGAAAGCGGTTGATGATGGCGCCGATGTCATTGATTGTTCCATTCAGATGACCAGTGATGGAGTTCCTGTATGCATGAGTTCAATTAATCTGTTTGAGACCACGAATGTTCAGAGAACCCCTTTCAGCAATCGTGCTTCTATCTTTAAAGATATTCAGCCTACTCCAGGAATCTTCACATTCAATCTCACTTGGGCTGATATTAGCAGTAGCGATTTGAGACGTTAGTTTCTTTACCTCACACTTGCTATTTTTTTTCTATTAGAATTTATCTACTCTATCTTGGCAATTAATGTGGATGGCACAATAAATGAAGAAAAATAATCATGCATTTGATCGTTGTCTACAGCCAAGATATCTTCCCCAGAGAGTATATATTATCTTGTAAGGAACCCAGTGCACAAAAATGCGGGAAATTTCTTCAGGTTATCTGACTTTCTAACATTTGCTAAGGATAAAGATTTGTCTGGCATCATGATCATCATAAAGGTGATGCTTCGTCTTGAAGTACTTCATATTCTTGTTAATCTGATCCTTTAGCTTCAAATTTTCTACCGCTTGAATTACATATGCACTATCATCTTCCTTCTGTGGGCAAAAGTTCTTCTGAAAGTTAGCTTTCAATATTTGTAAGACAAACATGAGTTATTAACACAGCCTGTTTTCGGAAGTCTGTGGTGCCTAGTAATAATATATTTTACATTACTACCATATATATCTATATATGTATATGTAAAATTATATTTTCCTCATTCTTGTCACATATTTGGACCAATTTAAAATATTTCCGTATCAGTGGAGCCTTTTACATTGATCAAACCTTTTGTACTGCAGAATGCTGTATTTATGGCAAATTCATTAGGATTTGATGTTGTTGATTCTGTAACCAAAGCCTTAAGTGATGCTGGCTATAATAATCAAACTACCAAAGCCAAGGAGGTTATGATCCAGTCAGAAGATAGTGCTGTTCTTGTCAACCTGAAGCAGCTGGAAACCAAATACAAGCTTGTCTACACTCTCCCATCAACTATCGGGGATGCTTCTGCTTCCTCACTGGTAGATGTGAAGAAATTTGCTGATGCTGTCATTGTTGACAGGGAATCTATTTTCCCCGAGAGCCAGGGCTTTATCATGAAGGAAACAAATCTTGTGAAAGATCTCCGTTCTGCTGGGCTAGCTATCTATGCACAGGTGTTCCGGAATGAGTTTGTATCACCACCTTGGGATTTCTTTTCAGATGTAACAGTGGAAATCAATAGCTATGTCCAGTCAGTTAATATTGATGGCATCATAACTGATTTTCCGAAAACAGTCAGAAGATACAAAAGTAAGTGTCATTTTCTGTATCCAATTATCCATAAGGTTCTATTATTTCAACTCTTGCATGTCTTAGATATGATGAAAATGAAATGTTCGTTCAGCTGATCACGCCTAGTATACATTAACTCTAATGGAGGAAACAAGTACAAAAGAATAAGGAAATATCAACTTTGCAGCTCCATTTAACCACCAGCAAATTGTGTACTGACATCTTGCTAATCTAACATGGTTTTTATCACCTAGACACAATTATCCTGTGTACTGCCATCTCGCTAATCTAACATATTTTAGATAAAGCAAATATTTGTCTTGTTACTTGAATAGTGTTATGTTTTGCACAGTAATTTATCCTGGCCATATTATGGTGTCACTCACTGTTGCTGCTTGCACGCATGCTGTCCTGTTGGCAGTGAACTCCTGTACCGGTCTGGGAGTTAACATGCCTTCATACATGAATCCTGCGGAAATTGGCGGCCTAGCGCAGCTACTCAACGGCAGCCAAGCCCAGCCACCAGCTCTGGCACCAATGCCGGTACTGAACTCATCAGACGTCACTGAACCGCCGTTCCCTTCTGCCGCGCCGAAGAATGCACCTGGCGGCGCTGCCAATGGGAGCACCCCTGCACCCGGTGCGTCGCCGTCAGGCTCTCAGGCCGCTGCTGTCATGAGAGCCGGCATTCTACCGATGGTGACGGCGCTCTTCGCGTCTCTGCTCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028949