BGIOSGA028971

From RiceWiki
Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028971| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028971, complete gene.| tag = OsI_298...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028971

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028971, complete gene.

LocusTag

OsI_29823

Ensembl Transcript ID

BGIOSGA028971-TA

Ensembl Protein ID

BGIOSGA028971-PA

Length

4053

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:26922561..26926613

Sequence Coding Region

26922561..26923178,26924084..26924142,26924994..26925059,26925267..26925381,26925652..26925782
,26926463..26926613

Genome Context

<gbrowseImage1> name=IndicaChromosome08:26922561..26926613 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:26922561..26926613 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCGGACGCCGCCGACGACGACTACATGGGGGACCTGTCCCACTTCCTCCCGCCGCCGACCCCTTCCTCCCCGTCGAGGAGCCTCGGGCGGAGGAGGCAACCGCCGGCGCAGCAGGCGCAGGGGCAAGGGAAGCGCGCGAAGGGGGTGGTGCCATGGCAGGAGCGGCGGCGGCGGGATCGGGAGCGGAAGCAGCGGGAGGAGGACGAGCGGACGATGGCCGGGCTCGCGGAGGCCATACCGGAGACCAACGTGGGTTTCAGGCTGCTGAAGCGGATGGGGTACGACCCCGCGGCCGGTGGCGGCGCGGGCGCCGAGCCGGTGGGAATCGAGATCCGCCGCTCCCGTGCGGGGCTTGGGGCGGAGCCTGCTGTATCGGTGGCGCCGCCGCAGCCGTCGGCGGAGGTGGCGGAGGGGGAGAGGAGGCGGGTGGAGGAGATGGCGGTGGAGTTGAGGGCGAGGCAAAGCACGCAGTGGAGGAACCGGAGGGTGGTGTGGGATTACCGGAAGGCTGAAGCCGCGCTCGCGCAGCTGGAGAATCGGGAGGCTGCGCCGCCACCGCCGGAGGGGGAGGAGAAGGCTGAAGAGGAGGAAGAGGAGGTGATCACTGAAGAGATATATAGCAGTGCACCGTCTTTACGTAGTTCTAAATCTGCAACGAGCAAGCAAGTGTGGATTTGCAAAATATATTGGCTAAGCTGCGCGATGAACACTACTATTGCCTTTATTGCGGTTGCAAGTATGAATCAGCAGAAGCATTGGCAAATGAATGTCCTGGGCCAAATGAAGATGACCATTAATTCGCTGTGTCTGGGGCAACAAAGAATGGTCCTTGTTACAACAGGTGATGATTCTCTTAAAGCTACAAGGGTGGAACTGGAAAGCTTCAGGAAGAGTTTACAGTTCTGCATATGGTATGCTCTGCTCCTCCATGTAGAAGGCTTCAAAGGAGCCCTTGCTACAGCTCTTGAAAAGTCCAAATCAAGAGTGAAGAAGCTGCCAACATGGATCATCCTCCTCTCACCTCAGCCAGCCCATCAAAGGCATCAACAGAACACCACTGGTGCAGAGAGCATGCTGCAAATCCACGCTGTGCATGTGGTCTCACTTTACATGAACACACGCCCTTCGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MEPDAADDDYMGDLSHFLPPPTPSSPSRSLGRRRQPPAQQAQGQGKRAKGVVPWQERRRRDRERKQREEDERTMAGLAEAIPETNVGFRLLKRMGYDPAAGGGAGAEPVGIEIRRSRAGLGAEPAVSVAPPQPSAEVAEGERRRVEEMAVELRARQSTQWRNRRVVWDYRKAEAALAQLENREAAPPPPEGEEKAEEEEEEVITEEIYSSAPSLRSSKSATSKQVWICKIYWLSCAMNTTIAFIAVASMNQQKHWQMNVLGQMKMTINSLCLGQQRMVLVTTGDDSLKATRVELESFRKSLQFCIWYALLLHVEGFKGALATALEKSKSRVKKLPTWIILLSPQPAHQRHQQNTTGAESMLQIHAVHVVSLYMNTRPSN</aaseq>

Gene Sequence

<dnaseqindica>1..618#1524..1582#2434..2499#2707..2821#3092..3222#3903..4053#ATGGAGCCGGACGCCGCCGACGACGACTACATGGGGGACCTGTCCCACTTCCTCCCGCCGCCGACCCCTTCCTCCCCGTCGAGGAGCCTCGGGCGGAGGAGGCAACCGCCGGCGCAGCAGGCGCAGGGGCAAGGGAAGCGCGCGAAGGGGGTGGTGCCATGGCAGGAGCGGCGGCGGCGGGATCGGGAGCGGAAGCAGCGGGAGGAGGACGAGCGGACGATGGCCGGGCTCGCGGAGGCCATACCGGAGACCAACGTGGGTTTCAGGCTGCTGAAGCGGATGGGGTACGACCCCGCGGCCGGTGGCGGCGCGGGCGCCGAGCCGGTGGGAATCGAGATCCGCCGCTCCCGTGCGGGGCTTGGGGCGGAGCCTGCTGTATCGGTGGCGCCGCCGCAGCCGTCGGCGGAGGTGGCGGAGGGGGAGAGGAGGCGGGTGGAGGAGATGGCGGTGGAGTTGAGGGCGAGGCAAAGCACGCAGTGGAGGAACCGGAGGGTGGTGTGGGATTACCGGAAGGCTGAAGCCGCGCTCGCGCAGCTGGAGAATCGGGAGGCTGCGCCGCCACCGCCGGAGGGGGAGGAGAAGGCTGAAGAGGAGGAAGAGGAGGTGATCACTGAAGAGGTAATTGTTCGTTGTTACTTCCAATTCTCACCAATTTTTTTTATCTGTTACTCAAATTCAATCATTCTGTTCCTGAATTACGCTTTGTTGAAACATTTCAAACAAACATGGCGCATATTATAGTCATCTTAATTAGAAAATTGGAACCTGGGTGAAGGTTTCGAAGGTTGTTGCGCGATGCCATTTGCCAACTAAACTGTCAATTGATTTTGGCGCTGAAGCATAGAAACTACCGCAGGCATGATTTATTGGATGAAATGTGGAATATGATTTACGGAATAGACCACTATACTGATCTTATCATCTTAAGCTTCAATATGGGTCAGTCACAAGCACACAACTTCAATACTAGTAGTTACTACTTACTACCCCGTGCTTTGCTGCGGGCATTGGGGATTTCAAAATAGCCAAATTGAAGATAGTCACAGTAATAATATGTTGCAAATCATTTTATAGCCTGCTAAGAAATAGCTTGCAAACAACACAATGATAAGTCACTTCTTTGCTGGCCAAATGGTAAGGATGCTTGACTATGTCAAATACTCCTAGAATACACTGAAAGAGAGCCAGTAACAAAACACTGATATGATTCCAGTGAATAAAATTTAATTCTAAGAAATTATAATTATCCTAACAGAACTGATGGGAACTGAAAGGGAACCATTTATCTATTCTTGAGTGAAATATGAATTACTAATAAATAGCAGTGTAAAACCTTTTGTGTTCAATAACGGCAAAAAACATCATCGTCCTAACGTAATTTGCAATTAGATATATAATAAAATAATATATGTTTTTAGTTCATTACATGCTATATGAAACATGTGAAAATAATGATTAACCACTTGGAAGTCATGCACAGAAGAAGAATATTCCTGCAAAGATACTTGATAACATATTTTCAGATATATAGCAGTGCACCGTCTTTACGTAGTTCTAAATCTGCAACGAGCAAGCAAGTGTGGTTGGCATCTTTCTAGGTGAAAATTGACGACAGTATCATAACATCACTCTGGCTTTCGTCAAACAAATTTTAAGCATAGTTAGTGAATGATTCCAGGACCATACCCACAACACCAATAACTGAACTAGCACCTATCTTAGGTTCTGATTGTACAGAACAATTAAAGGATAATTAATATATGACAAAGTACTGTACCAATAGAAAAGTTTCAATGGTACAGACTGAACACATACACATGAGGATGCGAGGGATGATGACCAGGAAGCGTTGCTGCTTGGTTGGAACCTGTGCAATATGATTGCAGAGCAGATGTAACAACTGGGACGTGACCAAGTTTGGGCCTTGTTATTTCTTTCTGTAGGCAAGCTAATGGTCCAATGTATGTAGGCCTGTCAAAGATAATGGGGATCCAACAATTTATCAACACGGAACGATTGATCCAATGGTTCAAATGTGCTGCTGACATGAGTAAATGTGGAGCAGCTTTTTAGAAATAAATGCTGCTAGTGGGTTGTAACTATATAGAAATAAAGGATATATTGCATAGGACCTTAGGCATTTCATCACAATTTTCCATTGTGACGAGCATGATAACTGGTATTAGTAACGCAATTGCCTCCGTGCCTATTTGGTTCCTATGAAGGGCTAACCGTAAATGCTTACCAGCTATTGGTTACACATATTATGTTGTGACAATGGAAATAGCTCGAACTTTGAATTATGAATATACTTATGTTTGCACATTCTTTCCTTCATATTCTTGTCTAGACTTCCTTTTTTATCTGAGAAATCTTATGCAAGACTGCAAATTTTGCTGAAAGGACGAGATTGACCTGTGTTTATTCTTGCAGGATTTGCAAAATATATTGGCTAAGCTGCGCGATGAACACTACTATTGCCTTTATTGCGGTTGCAAGGTCAGCTTCATTCTGGAAATAAGCTTCAGCTCTACATAGTACTAGTGTTTATGTGCATGCCCCTACTGCCTACTGGACGGCATTACTGTTGGGAATCTGTGATTACCATATCATGTTGGATCTTTGGTTTTCTCTGCATTTTAAATAGGGTGATCTTTTATAGCATCTTCCATGCTTTTAAAATTGGACGCATTGTCCCCTTTTCAGTATGAATCAGCAGAAGCATTGGCAAATGAATGTCCTGGGCCAAATGAAGATGACCATTAATTCGCTGTGTCTGGGGCAACAAAGAATGGTCCTTGTTACAACAGGTGATGATTCTGTAAGTGCAGGAATCTTGTTCAGTAATGATTTGCATACTGCGTTGGATTCCTGATGCACTGGAGCTTCAGAATCTTGTCCTTATCATACATGTTCAGTTAAGGGGTATTTGTAGACTGTAGTACTAATGGTCTAATATTTTGATGAATTAACTGTATCATGCAGGATTTGCAAGTTGCTGTAAACGATATTTTGGGACCTATACTGCGAATCACCTTTCACATTTCAGTATCACATCTCAATGTTAGAAATGATAATTCTCTTGCGGCAGCTTAAAGCTACAAGGGTGGAACTGGAAAGCTTCAGGAAGAGTTTACAGTTCTGCATATGGTATGCTCTGCTCCTCCATGTAGAAGGCTTCAAAGGAGCCCTTGCTACAGCTCTTGAAAAGTCCAAATCAAGGTGCCTCTCCTCACAGTGAAAAAGAGTCGTGTCAATGGAACAAGTGATCTGCGACATATGATAATGATAAGCAGATGGCGCCAAAGCAATTATACATTTCTGTTTTCCAATCACGGTGATAACTGTTCAAGTTGGTAGTACTGTGTTTAGGATGGCACTGATATTTTTGATTCATTCTAGCAATACATCATACACCTGTTGCTGGGATCTATCTTCAATGCAATGATGGTTTTACAACTGTGTCAAATCTTGCATGTGACATTAAGATCCATAATCACTGTTTGCTGATCACAGGCTAGCTAACATATGGTTACACCACTGTTTAGCATGATGTCAATTATGTTGCAATGACTGCATCAGTGCCACTGTATGTGTCCTCTTTGGCCATTTATGTGGGCTCTCTCCCTCTGTCGTGACATGGATGAGGTGCATTGCCTGCTGACAGCAAAAGTTTCAGTGCTCAGTGCTCTCAAGTCACAACCAAAGGTGACCAATCAATTGGGACGAAATTGAAGCAACAACCCAGCAAACAGTGGCTGGAAAACAAGAGATGCTTGATGCAAAATTCCATGGAGTATCTATCATCACAGAAAAGCAAGGTGGTAATGTTTTATTGTAGAATATATCACTGCTCTCCACTTGTCTGCAAATCTGAACATTTCTTCTCTTTTATTTTTCAGAGTGAAGAAGCTGCCAACATGGATCATCCTCCTCTCACCTCAGCCAGCCCATCAAAGGCATCAACAGAACACCACTGGTGCAGAGAGCATGCTGCAAATCCACGCTGTGCATGTGGTCTCACTTTACATGAACACACGCCCTTCGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028971