BGIOSGA028990

From RiceWiki
Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028990| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028990, complete gene.| tag = P0711H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA028990

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028990, complete gene.

LocusTag

P0711H09.20

Ensembl Transcript ID

BGIOSGA028990-TA

Ensembl Protein ID

BGIOSGA028990-PA

Length

5203

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27131596..27136798

Sequence Coding Region

27131596..27131758,27132239..27132637,27135454..27135871,27136609..27136798

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27131596..27136798 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27131596..27136798 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCGCTTGGTGACGCACCTCCACCGCCTCTCCCACCGCGCCATCCCTTCCCCGCCTCCATCTCGACCCCCAACCACCACTAGCCTCCCCTTCCTCCTCTCCCGCCGCCTCCTCTCCGACGACGCCGCGCCTCCGCCCGCCGCCGACGTCCCAAACAAAGAGCTGAAGCGGCGGTTGGAAACTTACTATGGGGTGGACGATGAGGCAGAACTACCATCTGTCACAGAGGCTGTTCTTGAGCGGAAGCTTGCGGATGTGCACAGCGAGACGGACGATGAACTTATCGAGGAGCTGCGCAGCAAACCACTCCCTGAGGTTCGTGACAGGGATTTTGAGTCCGACTTTGAGGAGATGCACGATACTGATGAGGAGCTGGACAACTTGTACAACGCCAGACAGTATGTGGAGAAAAAGATCAAGAGTGACGAGTTCTTTAATATGGATGACGACAAGTGGAATAAGATGATCAAGAAGGCTGTGGATAATGGCCACCTCGGTAATATGAACGAATGTGAGAATATTTTGGAGGACATGCTCCACTGGGACAAACTATTACCTGATGAAATTAAAAAGAAGGTGGAGGCCAAATTTAATGAGTTGGGGGACATGTGTGAGAAGGGAGAGCTTGAACCTGAGCAGGCTTATGAATTATTCAAAGAGTTTGAGGATAAGATGGTTTCAGAGTGCACAGAACTAATGGAAGCTGAGAACCCAACTGACGTGGATGAATTTTCTAAAATGGAAAATAAGAGTGTTAAGTTGGACGATCCACCTGGTGAGGGACCTGTTCTAAGGTGGGAGTCACGTATTGTCTTTGCTCCTGGAGGTGATGCATGGCATCCCAAAAACAGGAAAGTTAAACTCAGTGTGACTGTCAAAGAGCTGGGACTTTCACGACATGCCTTCCGACGTTTACGTGAGGTTGTTGGGAATAGGTACAATTCTGGAAAAGATGAACTCACAATAACTAGTGAAAGGTTTGAGCATCGGGAAGAGAACAGGAAAGATTGCTTGAGGACATTGTATGCTGTAGTAGAAGATGCAAACAAGGCCAATAAGTTGGCTGATGATGCTAGAAATGCATATGTTAAAAACAGACTTAAGGCCAATGCTCAATTCATGGAAAGGTTGAAGGTGAAGACACAGAAATTGAGGGTAGCTGCATAA</cdnaseq>

Protein Sequence

<aaseq>MRRLVTHLHRLSHRAIPSPPPSRPPTTTSLPFLLSRRLLSDDAAPPPAADVPNKELKRRLETYYGVDDEAELPSVTEAVLERKLADVHSETDDELIEELRSKPLPEVRDRDFESDFEEMHDTDEELDNLYNARQYVEKKIKSDEFFNMDDDKWNKMIKKAVDNGHLGNMNECENILEDMLHWDKLLPDEIKKKVEAKFNELGDMCEKGELEPEQAYELFKEFEDKMVSECTELMEAENPTDVDEFSKMENKSVKLDDPPGEGPVLRWESRIVFAPGGDAWHPKNRKVKLSVTVKELGLSRHAFRRLREVVGNRYNSGKDELTITSERFEHREENRKDCLRTLYAVVEDANKANKLADDARNAYVKNRLKANAQFMERLKVKTQKLRVAA</aaseq>

Gene Sequence

<dnaseqindica>1..163#644..1042#3859..4276#5014..5203#ATGAGGCGCTTGGTGACGCACCTCCACCGCCTCTCCCACCGCGCCATCCCTTCCCCGCCTCCATCTCGACCCCCAACCACCACTAGCCTCCCCTTCCTCCTCTCCCGCCGCCTCCTCTCCGACGACGCCGCGCCTCCGCCCGCCGCCGACGTCCCAAACAAAGGTACCTTCTCTCGTCTCCAACCATCTGCTCGGCGAAATGCCAATGAGCTGTTAACAACATTCCCTTGCTTGCACCTGTCGGAATTGGTCCCCCTGTTGATGATGAGATCGGAGTCTGCACCTGCTCGGTTTAATGCCTCCCTGCTGGATGCTTCCTCGCTTCCTAAGCAAAGATAGTCTTGTTGGGAGTCTAGCGTGGCTTGCCCCTTCCGGCTGCTTGAAGTCTGTTTTTAGCCACCGTAGTTTCTCTAAGCTTCAGTTTTTTTTCATTTGCTTTTTCTCCCTTCCCATAGCCTAAACGGGTCTGGCTGATTGCGTCGTGTAATCTTCTAATATATTGACGTGCAATCTTTTTGCATGTTCGCAAAAAAAAAAGAGCAAAGATAGTCTCGCGTGGTTCTTCATCTTCCTATGCCGTAATATTAATTGTGGCACGGAAATGGCCTGTTTGATTTGTCCATGACGATAACTCTGACTGCAGAGCTGAAGCGGCGGTTGGAAACTTACTATGGGGTGGACGATGAGGCAGAACTACCATCTGTCACAGAGGCTGTTCTTGAGCGGAAGCTTGCGGATGTGCACAGCGAGACGGACGATGAACTTATCGAGGAGCTGCGCAGCAAACCACTCCCTGAGGTTCGTGACAGGGATTTTGAGTCCGACTTTGAGGAGATGCACGATACTGATGAGGAGCTGGACAACTTGTACAACGCCAGACAGTATGTGGAGAAAAAGATCAAGAGTGACGAGTTCTTTAATATGGATGACGACAAGTGGAATAAGATGATCAAGAAGGCTGTGGATAATGGCCACCTCGGTAATATGAACGAATGTGAGAATATTTTGGAGGACATGCTCCACTGGGACAAACTATTACCTGGTCAGTCATATCTGTCTCCCACCCTCACTCTTTTCTCTTGTGAATAGGTGTGAAGTAAAACTTTTCTCCAAACACAATTCTTTATTTGCTCCACTAAAAGTAGCTAGGACACTTGGTTTGATACTGTGACTGTTAGTTTATTTATTTTTGGTTTACCTTGTCATCTGTATCAACTCATTGTGGTTGAAATATTTCCTTAATTTAGGGAGAATTTAGATTAACTTATTGGATTATAACTGTTTAATGGTATTCTTGTAAATATACCTCTGGTTATTAATCTAATCACAGGAGCCTCTCCTGCTGTTTTTTCGTCGAAAAAAAAACTGTTTAATGGTATTCAAAGTAAGTTTTAAGGTTGGTTGTCACAAATCAGTGAAATTACAATGCCCAGGTAGTCATGGCAACTTGGGATGGTATTTTATACTACGGTAGATTATGGTCTACAATCTGGGAAATATCCAATTTCCTCTCATCTTTCTACTATATGTTATGCTGTGGAGGGTTGGATGCAAGCTCTTGTTTGCTGGGATGTCGTATTCCTTTCTACCTGGTTATTCATGGCCAGCAAGTTTGGGTTCTTGTGCTGTGATGGGATGTTTTAGTTCAAGAAATGGGTTAGTCCTAAGAAGAAATCATTCCTTTCCTTTGGATGGAATAGTGAAATATTTATGACCAGAAGGGCAGTATGAGTAATGGCTATCCATTACAAATTATGTTGTCTAGCCATGTTTTCCATGGTTGTCTTGTTCTTTTTACTCTAAACATACCTAAAGTGTCCTTTAAAGTGGATTTGTCATGCCAAAAAGCTTGGTTTTTTGCCACCAAACGTTTGGCCATTCCACTTCCAAATGTTCTACATACCAATACTGAAATTTTCAACGCTACCAACTCACTGCTCATGCTTTTGTTCAGTTTGTGCAATGGACTTAGCTGGTGTGTTACTACCTCATCTCTAGTGAGTACAAAGGTAGTAGAAAAAAGTGGATTAGGACCATCCCTACAGAATTACAGGATCATCCCATAAAATATCCTAGGATGGGGTGATCCATTACACCCCTTAGATCAATTGGTTAGCAAGTGATTGACTTTACATATAGACCACTCTTTATGCAAGTAGCACATGCTAGTGTATTCAGTCTAGTGGATTGTTCAGGATAGAAGCTATGAGCATAAGCACCCATTCTGAACCTATCTAAAGTGTGTATGTTGAACCGTAGCGTGTCTAGCTTTTACATCAATTCTCAACTATATCTGACTGGCTTCCTCTTAGTACCAGCACATGATTACCTGCAACAATATAGATATAAAGGCCTTGTGAGTTACGAGTTCCCTTCATTTCTAGGAATGAACATAGCTGCCCAGTTGGTTTTAGCACTTTTTTCTTGAACAAAAATGCAAGCATATGTTCATTCCTGCGCCATTATTGGAGCTGTCATCAGAAGCTTTCAAGGACTCCATGACTTGGTGTGTATACTGTAGAGTTGGACCTCTTTAGACTCACGGTGCATATCCAAGAGTGGGGTTTTCTGGGCATTTTCAGCTTACAAAGATACTGACTAGAATGCCATCTCATTAGAAAAGGTGGGTTTGAGATGGGAATCTGTAGATTGCAAAACCTGTAGAATATTGCTGCAGTCCTATGCTAGGGGGCAAAACTCAACCTCTTGGTTGAAGTCATAATGAAAACCCAAGAAATTGTTGCGTCCCTGGGATTTCTATTTTTTAAAAAACTTTTGCTGAATCAGTTACCTGGACATTGGCCTTCTCTATGGACCACTTTTCCTGTTTAAGCAACAGAAGTCTCCATACTAGGTGAATCTTTTTGTTTACATGTACTATGTATCGGCCATTCCTTATTCCTGCATGTGATTATGTGAAAAGACCATGCAACATTTATACATAAAGTTAATGATACTTAGGACATGTTTGGTGACTGTTATCTTCATGAGAAAAAGTAATGCCTGAAGGTAGCCTGACAGTGGTGAAGCCAGGATTTAGGCATGAGGGGGGCCAACTTGATAAGTGATCATGATTAAAAAAAGAGTAAAAAATATACGTGAATTTGAAGGTTCCCCAAATGTAATATATCATATCAACATAAAAAGACAGAAGTTCAAAAGAGACTGCATATATTTATTTATTTTAATTTAGCCTTTTGAGCAGTTAGATCATAAGCAGTGATAAAATCATTCGATCTAAAAGTCTAGACAAACAGAAAAAGACACAAAAGCTAGATTATGGCAAAATGAGTGACAACTATCTATCTTTTCCAACTATTAACTACTACTATTTAGCTAGATTATGCAAAATGAGTGCCAGGTCTCCCGCCGCCCCCCTGGATTCACAGTGTGGTTTCGATATCTTGAATCGTTTGCGGCATTGGTTGATAATATGCCTAAGTTGTACTCCACCCCAGCACAATAAATAGAGGGAAAAAAATGTTGATCTTGCCACAAACACCCAACTACATGGCCAATTTGTAGGCGGTTATTGCGACCAATTTGTCCCACTTATTCGTGCCATCCAGGCTGTGGTAGAACATCTAAGTTAAACATAACACGTTATCTAAGCAGCCCTGTGGAACCAGTCTTGTGTTTAACTAAACAGTACTGATTGTTCAAGGAACTAGGAGGTTTCAAACTTGGCTCTTGCATATGGACCTGTTGTTCTACTCTTCAATTCATGCATGGTTCAGTAATCTTATTGTAATGTTGTATTACTAATAACTGTTGTATAGCTAGGGGCCTTTGTTCCTTTTTCCCTGCACTTCTTTTATCATATTTTATTGTATTTTTTAAACACTATATTTTGTCCAGATGAAATTAAAAAGAAGGTGGAGGCCAAATTTAATGAGTTGGGGGACATGTGTGAGAAGGGAGAGCTTGAACCTGAGCAGGCTTATGAATTATTCAAAGAGTTTGAGGATAAGATGGTTTCAGAGTGCACAGAACTAATGGAAGCTGAGAACCCAACTGACGTGGATGAATTTTCTAAAATGGAAAATAAGAGTGTTAAGTTGGACGATCCACCTGGTGAGGGACCTGTTCTAAGGTGGGAGTCACGTATTGTCTTTGCTCCTGGAGGTGATGCATGGCATCCCAAAAACAGGAAAGTTAAACTCAGTGTGACTGTCAAAGAGCTGGGACTTTCACGACATGCCTTCCGACGTTTACGTGAGGTTGTTGGGAATAGGTACAATTCTGGAAAAGATGAACTCACAATAACTAGTGAAAGGTATGATAGATTTCCTGCTTGCAGCTTTTGTATATTATGCTAATTTAATTGTGCGGTATATCACATACAGCAATGTTGTTGACAAATTGAGCTATATCCCGAGTCAAGGTGTTGAACTATACATAATGTCAGGACGGAGTTTACAAATTTACTTTCTGTTATCAAATGCAAAACAGGCAAATAGAGGAGTATAAATTCTCGTAAATTGTATAGTTCTATTTCCTTTTTTTGTTGAAAATATTCTAGTTCTGGAACCTTATGTTTCCTGGTTGCTGGGTAGATACATGGATTTGTGTTTGTTATACATGCATGCCCATATTACACAGGAGAAATATGGGGAATTCGGCAGACTTTGCATCTGCTGTATATTTGGTAGTTAGGTTTCTTTAAAGTTGCCAACTTAATTATTCAAGCTTCTTATTGAGTTGTGCTTGTTGCTTGGGAAATGTCCGAAGGTATGTTGGGTTCTGATAGAATCTTACTATGCTGTAGTGTTTTTTAGTATTATAGTAATAATAGCATTCTTTCTTGAGATGCCTTTTGTCTCAATGATCTAAGCAAAGGTGGTGAACCACTATTACTGGCAGGATGTGTGATTTTATTGTGTCATGTATTTGTTTGGCTTTTATACATATTGATGACATTGAGCCGTTTTGTTCTTCAGAGTGCTATGATCTTACCATCAGCATATAGTGGCACTGTAGAAATTGTTGATAAGTATTTGATTAATACCGCAGGTTTGAGCATCGGGAAGAGAACAGGAAAGATTGCTTGAGGACATTGTATGCTGTAGTAGAAGATGCAAACAAGGCCAATAAGTTGGCTGATGATGCTAGAAATGCATATGTTAAAAACAGACTTAAGGCCAATGCTCAATTCATGGAAAGGTTGAAGGTGAAGACACAGAAATTGAGGGTAGCTGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028990