BGIOSGA028999

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Revision as of 08:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA028999| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA028999, complete gene.| tag = OsI_298...")
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Gene Name

BGIOSGA028999

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028999, complete gene.

LocusTag

OsI_29876

Ensembl Transcript ID

BGIOSGA028999-TA

Ensembl Protein ID

BGIOSGA028999-PA

Length

3123

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27276640..27279762

Sequence Coding Region

27276640..27276910,27276990..27277073,27277166..27277300,27277394..27277675,27277787..27277919
,27278012..27278174,27278245..27278373,27278455..27278649,27278966..27279088
,27279649..27279762

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27276640..27279762 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27276640..27279762 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCCTGTGCTTCCAAGTCTGTCATTGAGCAGAGACCACCAGCAAGGCACTATACCAGGAAAGGAAGAAGAGCTCGTACTAATTCCCGATCCATCATGCCAGAGGCGCCCAAGTCACGGTTGAACGATTCAAGAGGACACATGACTGACTTCTCAATGAGTGAGGTTGTCCATTTTGAGACATCATCAAACCATGGAAAATCAGAGCATTCCAAAACATTCCACCTCACACAGATGCAGTGGCACCACAGCCAGAGGGATTCCAATGGTTGCTGCAAAGAAGATGCCTGGTTTGACTCCGTCAGTATTCTCGAGGACGACTCCGACGATGAATTTAAGAGTGTCAATGGAGATTGGCCTGATGATGATAACCAAACGAAGAGTGAGAACGCTTCCCGTTTTGCTGACGCACTCTCTCGCATCGGAGACTTATGCCGTGGGGTGCCCATGACATTATCTGTAGAACAGTATCTGAAAAGAGACAATAGTAATGATCCTGACCGTAGGAGCCAAAGCATGGCAATGTGCGCAACCAGGTGCCTACCAAGCTCCTTTAGCTTTAAGGGTTTGAAGGAGGCAAATGATGCTGATGAGAAGAGCAAAGAGAGCAGCACCCCATCTCGCATACGCAAGCTGTTGCATTCTTTCAGCTTCAATGACAAAATGCAGCAGCTGACCTGTGGAAGTCCAGCAAAAAAGAAGTCAACAGTCATTAGACTATCATACAAGAGAACATCATGTGATGACTATGAAGATGACAGCGAACTGGGCGAATCAGAGAAATATGTGGTCCGCCCCAAGGGAGGGACAACAATTCTGTATAGGGGAGAAAAGCCCACATCAGGATGTTGGTCACGGATTGATCCATCCCTCTTCAAGCTCAGGAGTGAAACCTTCCTCAAAGACAAGAAGAAATGTGCTGCTCCAAACTATGCTGCTTATTATCCTATAGGTGTGGACTTGTTTGCCAGCCACAAGAAGGTTCAACACATTGCTCAGCACATTGAGCTTCCACAAGTCAAACCACATGACAAGCTCCCTTCACTTTTAATTGTTAACATCCAGATGCCCACCTATCCTGCTGCTATGTTCCTCGGCGACAGTAATGGAGAAGGATTGAGCCTTGTCTTGTACTTCAAAATCTCAGAGTACTTCGACAAGGAGGTTTCAGAGCATTTCAAGGAGTCCATTATGAGATTTATTGAGAATGAAAGTGAGAAGGTTAAAGGGTTCGCATCAGAATCAACAATCCTTTATAGAGACCGGTTAAAGATCATGGCTGGACTGGTTAACCCAGAGGATCTTCAATTGAGTTCCACAGAGAGGAAGCTTGTCCAAGCATATAATGAGAAGCCAGTCCTCTCACGACCCCAACATAATTTCTTTGAGGGAGAGAACTATTTTGAGGTAGACCTTGATATACACCGATTCAGCTATATTGCAAGGAAGGGATTGGAATCATTCCGAGAACGCCTGAATAATGGAATCCTTGACCTGGGTTTGACAATTCAGGCCCAGAAGCAAGATGAACTCCCTGAGCAGGTCCTCTGCTGCGTTAGGCTGAACAAGATTGATTTCATTAACCATGGGCAAATTCCAACTATCGTCACATTGGATGACAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MGSCASKSVIEQRPPARHYTRKGRRARTNSRSIMPEAPKSRLNDSRGHMTDFSMSEVVHFETSSNHGKSEHSKTFHLTQMQWHHSQRDSNGCCKEDAWFDSVSILEDDSDDEFKSVNGDWPDDDNQTKSENASRFADALSRIGDLCRGVPMTLSVEQYLKRDNSNDPDRRSQSMAMCATRCLPSSFSFKGLKEANDADEKSKESSTPSRIRKLLHSFSFNDKMQQLTCGSPAKKKSTVIRLSYKRTSCDDYEDDSELGESEKYVVRPKGGTTILYRGEKPTSGCWSRIDPSLFKLRSETFLKDKKKCAAPNYAAYYPIGVDLFASHKKVQHIAQHIELPQVKPHDKLPSLLIVNIQMPTYPAAMFLGDSNGEGLSLVLYFKISEYFDKEVSEHFKESIMRFIENESEKVKGFASESTILYRDRLKIMAGLVNPEDLQLSSTERKLVQAYNEKPVLSRPQHNFFEGENYFEVDLDIHRFSYIARKGLESFRERLNNGILDLGLTIQAQKQDELPEQVLCCVRLNKIDFINHGQIPTIVTLDDK</aaseq>

Gene Sequence

<dnaseqindica>1..271#351..434#527..661#755..1036#1148..1280#1373..1535#1606..1734#1816..2010#2327..2449#3010..3123#ATGGGTTCCTGTGCTTCCAAGTCTGTCATTGAGCAGAGACCACCAGCAAGGCACTATACCAGGAAAGGAAGAAGAGCTCGTACTAATTCCCGATCCATCATGCCAGAGGCGCCCAAGTCACGGTTGAACGATTCAAGAGGACACATGACTGACTTCTCAATGAGTGAGGTTGTCCATTTTGAGACATCATCAAACCATGGAAAATCAGAGCATTCCAAAACATTCCACCTCACACAGATGCAGTGGCACCACAGCCAGAGGGATTCCAATGGTACTACTCTACTAACTGAAGCTGATCTGTAGGAGTAGATGAATCGACCTAATTTGATCGATCATACGTACCTATGTAGGTTGCTGCAAAGAAGATGCCTGGTTTGACTCCGTCAGTATTCTCGAGGACGACTCCGACGATGAATTTAAGAGTGTCAATGGAGGTGAGATTTGCATACATACTCAAAATGTTCACTGTGAAAATAGATGCATGTTCCAGGAAGCTGCAAGACTGAAGATTAAAGATGTACTGTAGATTGGCCTGATGATGATAACCAAACGAAGAGTGAGAACGCTTCCCGTTTTGCTGACGCACTCTCTCGCATCGGAGACTTATGCCGTGGGGTGCCCATGACATTATCTGTAGAACAGTATCTGAAAAGAGACAATAGTAAGAGCAATTTCACCTCAAAGGAATACCGATCATTGAAATACTACCAACAAACAAACCTCTAAATTTTCTCTGACATTCTCACATTGAAAGGTAATGATCCTGACCGTAGGAGCCAAAGCATGGCAATGTGCGCAACCAGGTGCCTACCAAGCTCCTTTAGCTTTAAGGGTTTGAAGGAGGCAAATGATGCTGATGAGAAGAGCAAAGAGAGCAGCACCCCATCTCGCATACGCAAGCTGTTGCATTCTTTCAGCTTCAATGACAAAATGCAGCAGCTGACCTGTGGAAGTCCAGCAAAAAAGAAGTCAACAGTCATTAGACTATCATACAAGAGAACATCATGTGATGACTATGAAGATGACAGCGAACTGGGTATGCGAAATTCATGTTTGCCTCCGGTCAAAAAAAAAAAATCATGTTTGCCCGCCCTAGCTTGACACCCTTTCACATCCAGCTAACGTTATTCTTCGTTTCAATGTATAGGCGAATCAGAGAAATATGTGGTCCGCCCCAAGGGAGGGACAACAATTCTGTATAGGGGAGAAAAGCCCACATCAGGATGTTGGTCACGGATTGATCCATCCCTCTTCAAGCTCAGGAGTGAAACCTTCCTCAAGTATGTATGCTAGAAATCCAGGAACAATATGTTAAACAAGGAGTGTAAACATGCAATTGATATACCTTGACCTACTATTTCAATACTTTCAGAGACAAGAAGAAATGTGCTGCTCCAAACTATGCTGCTTATTATCCTATAGGTGTGGACTTGTTTGCCAGCCACAAGAAGGTTCAACACATTGCTCAGCACATTGAGCTTCCACAAGTCAAACCACATGACAAGCTCCCTTCACTTTTAATTGTTAACATCCAGGTAGGTCCCTGAAAAAAAAATCTGGGTAAACTTTTTGCTGAATATGTCATGTCCTGATATTCAAGCACAGATGCCCACCTATCCTGCTGCTATGTTCCTCGGCGACAGTAATGGAGAAGGATTGAGCCTTGTCTTGTACTTCAAAATCTCAGAGTACTTCGACAAGGAGGTTTCAGAGCATTTCAAGGAGTCCATTATGGTTAGAGTTTCAGATTCAGAATCTTACTATTGTTCAGGTTGAATTTGTTTCTATGAACTAATAGAATGTATCTGACGGCAGAGATTTATTGAGAATGAAAGTGAGAAGGTTAAAGGGTTCGCATCAGAATCAACAATCCTTTATAGAGACCGGTTAAAGATCATGGCTGGACTGGTTAACCCAGAGGATCTTCAATTGAGTTCCACAGAGAGGAAGCTTGTCCAAGCATATAATGAGAAGCCAGTCCTCTCACGACCCCAACATAATTTCTTTGAGGTGCATAAGTAATACACGCCAAGTCAGTTTGATTTTCGAAAGTGGACCATAAATTTTATTTTAACCATGACAAAAAGAAAATTGCACAGCAGTAGTTGCTAGCATAACGTAGTGTACAGGATATAATGAATCCAGAAATCTTGAGATCATGTCTTTCTTGTTTCAGACAAGGAAGATCATTTATTTTTCATTCAATAATTAAATAGTAAAAGAGGACATTTAAAAGATCATTTAAGTGTGTTCAAGAAACATTTCATAAAATTTAGTACATAACAATTCAGTATACTGCAAAAGGTTAATGTTTTATCTGTTGCAGGGAGAGAACTATTTTGAGGTAGACCTTGATATACACCGATTCAGCTATATTGCAAGGAAGGGATTGGAATCATTCCGAGAACGCCTGAATAATGGAATCCTTGACCTGGGTTTGACAATTCAGGTAAATTTTCCTTCCAAGTTTCCAACATTAATGCAGTTAGTGTTCTTTTCTTTTCTGCTATTTATATGCATTGAGATTGATATACTTATTTGTTTTCATTAATATTAACCTGAGGGAGACACAAATTCCATTTCACTAAATGCTGCAAACACGAAGTAGACTATGAGGAGGAAAACCTCTTCTGTTCTCAAAAAACAGGGTTATAGCCTGAATATTTTTGGAGCTCAATTAAAATTGTAATGGTAGTAGCAGCAGTAGTGATAATAATAATAATAATAATAATAATAATAATTATTATTATTATTGGAAAATGAACTAGAAATATATACATGAAACATAGATGAAGATTACATACAATTCAAATCCTATCATCAGTCCCAGTAATTACTCAGTACCGACCGATACTATTTTCACTCTCACTAGTACAGCCAGATATCATTTTTTTTCATGTTAAACTATTCCATTAAAAACACTCATGAAAATAAACTAGCAGTCAACTGAGGGTGTTAATAAAATTTCAGAGCTATTTTAATTATTTAATTCATTTTATCATGATGCAGGCCCAGAAGCAAGATGAACTCCCTGAGCAGGTCCTCTGCTGCGTTAGGCTGAACAAGATTGATTTCATTAACCATGGGCAAATTCCAACTATCGTCACATTGGATGACAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028999

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA028999&oldid=35256"