BGIOSGA029084

From RiceWiki
Revision as of 08:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029084| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029084, complete gene.| tag = P0666G1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029084

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029084, complete gene.

LocusTag

P0666G10.131

Ensembl Transcript ID

BGIOSGA029084-TA

Ensembl Protein ID

BGIOSGA029084-PA

Length

3526

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28746734..28750259

Sequence Coding Region

28746734..28746934,28748221..28748400,28748581..28748687,28749037..28749242,28749634..28749773
,28749960..28750259

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28746734..28750259 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28746734..28750259 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGCTGCTCGCCCGCGCCGCCCTCCGCTCCCGCCTCCGCTGCCCGCCGCTGTCTGCTGCGGCGGCGTTCTCGTCGACCCCGTCGCCGGCGGCGGCGGAGGCGGAGCGCGCGGTACGGGACGGGCCCAGGAACGACTGGAGCCGGCCCGAGATCCAGGCCGTCTACGACTCCCCTCTCCTCGACCTCCTCTTCCACGGTGCTCAAGTCCATAGAAGTGTCCATAAATTCAGAGAAGTGCAACAGTGCACTCTTCTTTCAATAAAGACAGGTGGGTGCAGCGAAGATTGTTCATACTGCCCCCAGTCCTCAAGATACAGTACAGGATTGAAGGCACAAAAATTAATGAATAAAGATGCTGTCTTAGAAGCAGCAAAAAAGGCAAAGGAGGCTGGGAGCACCCGCTTTTGCATGGGAGCAGCATGGAGAGAAACCATTGGGAGGAAAACAAATTTTAATCAGATCCTTGAATATGTCAAGGACATTAGAGGTATGGGCATGGAGGTCTGTTGCACTCTCGGCATGCTAGAGAAGCAACAAGCTGAAGAACTCAAGAAGGCTGGGCTTACAGCATATAATCATAATTTAGATACATCAAGAGAATATTACCCCAACATTATTTCCACGAGATCATATGATGATAGACTGCAGACTCTTGAGCATGTCCGTGAAGCTGGAATAAGCATATGCTCAGGTGGAATTATTGGTCTTGGAGAGGCAGAGGAGGACCGCGTAGGATTGTTGCATACACTGGCCACTTTGCCTGCACACCCAGAGAGTGTTCCTATTAATGCATTGGTAGCTGTCAAAGGCACGCCCCTTCAAGATCAGAAGCCTGTAGAGATCTGGGAAATGATCCGCATGATTGCCACAGCTCGAATTGTGATGCCAAAGGCAATGGTGAGGCTTTCAGCAGGACGAGTACGGTTCTCCATGCCAGAGCAAGCGCTCTGCTTCCTAGCTGGGGCCAACTCCATCTTCGCTGGTGAGAAACTTCTAACAACCGCAAACAACGACTTTGATGCGGACCAGGCGATGTTCAAGATCCTCGGTCTAATTCCCAAGGCTCCAAGCTTTGGTGATGAAGCACCAGCTGCAGACACTGAGAGATGTGAGGAAGCTGCATCAATGTAG</cdnaseq>

Protein Sequence

<aaseq>MMLLARAALRSRLRCPPLSAAAAFSSTPSPAAAEAERAVRDGPRNDWSRPEIQAVYDSPLLDLLFHGAQVHRSVHKFREVQQCTLLSIKTGGCSEDCSYCPQSSRYSTGLKAQKLMNKDAVLEAAKKAKEAGSTRFCMGAAWRETIGRKTNFNQILEYVKDIRGMGMEVCCTLGMLEKQQAEELKKAGLTAYNHNLDTSREYYPNIISTRSYDDRLQTLEHVREAGISICSGGIIGLGEAEEDRVGLLHTLATLPAHPESVPINALVAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFAGEKLLTTANNDFDADQAMFKILGLIPKAPSFGDEAPAADTERCEEAASM</aaseq>

Gene Sequence

<dnaseqindica>1..201#1488..1667#1848..1954#2304..2509#2901..3040#3227..3526#ATGATGCTGCTCGCCCGCGCCGCCCTCCGCTCCCGCCTCCGCTGCCCGCCGCTGTCTGCTGCGGCGGCGTTCTCGTCGACCCCGTCGCCGGCGGCGGCGGAGGCGGAGCGCGCGGTACGGGACGGGCCCAGGAACGACTGGAGCCGGCCCGAGATCCAGGCCGTCTACGACTCCCCTCTCCTCGACCTCCTCTTCCACGGTGTACGCATCCCAATCTCTCCTCTCCTTTTCTTTTTTCTTTTCTTTACGGCCTTCGACTTCAATCTGTAGTTATTCCTTGCCGTTAGGAAAGTTTATTATTAGGAGTGTGAGAGAGTAGATGAGGAGCAACGAATGCGATGCCTTTCTTTGTTTCTAGATGTGCTTGAGAAATGCTCCCTTTTTGCTAGTGAAAAAGAATGGGAGAAGAATGAATTGGTGGGCTTCCTGTAGTAGCAGCCGGGGGAATAGTGATGCCAAGATAAACTTTTTTACTTTGTGGATCCTGGTTCATGGTGGATGTAGTTCTCGATAAACATCCTTTTTTTTGGTGGCATCTGGGATGATGAGTAGTGGATACTTCTCTTCTTCTTTTTTTTTACTTTTAGTCAAATATCTAATATTATGGCTATAGCATCAGGTAGACTCGCGTCCATGTCCAGCTAGCACTGCCTGGAATTAGTAGTAAGATGATACTAATCTGTCACCGAAGTTCTGATACATGATAGTGATTAGCATCTTATGACATACTAGAGCCTTTTAGTAGTGGGACTACCAATTATTCACACCAAACTTAGTGCGGATTTTGTACTTGGTGTTGGGTGAGATTTGCCACTTAGGATTGCTGAACTGTGAGAAGTGATGATTGACGCAAAGCGTAATGCTAAGCACCAACTGAAAAGGCTTTAACATTCAGGGGATATTATTTGTTTACTGTTGTTATAGCAGGTGCTAGCTTTTTCATTATGTACAATCACTAGTGCTTAAATTTGTGTGTTTGTTCCGGAAAAAACTTGAAATGATGTGTACTATCCCTATGCTATCAAGAAATTACAATGTGCTCATATGGATTTGAGGCTAAGCTTTTGCTTGGTCAAGCTCTAGTATTAATAGGAACTAACGCCCTCAAGGGCATTTATAATCTGGAAATTGGTGCCAAGGATTTCCCATATAGGGGCTTCAGACAGTTGGGACTTGATATTGCAAATTTAGCTTGAGTAATGAATGGCCCATATCAAACATGTTTGGTCACAACAATCTGCAACGATCTGACTGGCTTGATGCACGATAGTTTGTCAGCATTCATTCAAATGCATATCTTGGTCGCATTATTAGCTTAGTGCATCTCTGTTGGTTATATGTTGAACGTATTTCCCAAGCTTTTCGTTGATCATTTTAGTTAAAGGGGAAGGAAAACTATTGTCCAGCCTTCACATTAGTCAATAGGGAAGTAGCTCTCAATTGTAATGTATTTTCACTTAACCAGATAATGCTTGCATTTTCCATAGGCTCAAGTCCATAGAAGTGTCCATAAATTCAGAGAAGTGCAACAGTGCACTCTTCTTTCAATAAAGACAGGTGGGTGCAGCGAAGATTGTTCATACTGCCCCCAGTCCTCAAGATACAGTACAGGATTGAAGGCACAAAAATTAATGAATAAAGATGCTGTCTTAGAAGCAGCAAAAAAGGTACTGTTTTTGTAACTTTTATCTCAAGGTGACCAAGTTCATTTATGTTGTTGTTTTTAAAAATCTTGTGAAGTGGTAACATGAGTCCTTTCTTACAGACTGAGGACTTCAGCTTTAGTTCAGAAAATTATGGGTTGTAATATCATTTCACATTATTTCTTCTGATCTATTTCCGCTCAGGCAAAGGAGGCTGGGAGCACCCGCTTTTGCATGGGAGCAGCATGGAGAGAAACCATTGGGAGGAAAACAAATTTTAATCAGATCCTTGAATATGTCAAGGACATTAGGTATTATTTTTGAAAGATAACACAGTAGATTTATTGTGTGCAAGTATTTGTCACAGTCTTGCATAACCATGCACTGATGCACATGCTCTCTTCCATGCCATTGCTATGTCATCATTAGTTTATTCGTCTGTTTTTTTGTATTTCCAAACATATTAGTATTGTCAATCTTGAATGTAAAAATTAAACTAGTCTTTGCCTGTTCACTTACAAACAGACGTACTCTTGAGCCATATAGGACACTGACTTAAGCCTCTGCGTACATTACGATAGAATATTTGCATGAAGGTAGTTTTCTTGCTTTATCATTATCTTGACTTTGATTTACCATTCTGTGGATAAATCTCTGCAGAGGTATGGGCATGGAGGTCTGTTGCACTCTCGGCATGCTAGAGAAGCAACAAGCTGAAGAACTCAAGAAGGCTGGGCTTACAGCATATAATCATAATTTAGATACATCAAGAGAATATTACCCCAACATTATTTCCACGAGATCATATGATGATAGACTGCAGACTCTTGAGCATGTCCGTGAAGCTGGAATAAGCATATGCTCAGGTGAATACCAGTGTTACAGGCATTCCTCTCGTACTTTACAAATTTCAGGGTAAATGCATGTTTATCTTTGTCGTGTGTATGTAACGGGCATAATTGGGCTGAGGGACATTAGTCCTTGTCGAGGTTTCCTGGAACCTAGCCATGGTGGCACCAGGGAGGGAGAGAATAAGGACTACTCCTTACAAACTTTTCTCCAAGATCCAGCAAATAGCTAACAAATCGATATAATCTTATCTCCAATCTGAACAACCACTATGGATAGTAACCATGCGGGTACTGTTGATGTGCAATTTCACTGGCCCTAGGGAGGCTGACTGCTGCTTGTATATGGGCCCTAATGGGCACTTAATGACTTCAATGTATAACCTGAAGCGCCATGCTTTGTGTGCAGGTGGAATTATTGGTCTTGGAGAGGCAGAGGAGGACCGCGTAGGATTGTTGCATACACTGGCCACTTTGCCTGCACACCCAGAGAGTGTTCCTATTAATGCATTGGTAGCTGTCAAAGGCACGCCCCTTCAAGATCAGAAGGTATTCCACACTGCTGATTAGTTGTTCTAGGTTGGATATTTGCATCTAGCATCAGGATATATAAACTGTGCAGTACTGCAGTCTATAATAAGCTTTGGTATATTGGGTCAAAAAAAATAAGCTTTGGTATAAGATTATATGTTGTGATTTCTGTATCCATTATCTCTAATTAACATTCAACTTCAGCCTGTAGAGATCTGGGAAATGATCCGCATGATTGCCACAGCTCGAATTGTGATGCCAAAGGCAATGGTGAGGCTTTCAGCAGGACGAGTACGGTTCTCCATGCCAGAGCAAGCGCTCTGCTTCCTAGCTGGGGCCAACTCCATCTTCGCTGGTGAGAAACTTCTAACAACCGCAAACAACGACTTTGATGCGGACCAGGCGATGTTCAAGATCCTCGGTCTAATTCCCAAGGCTCCAAGCTTTGGTGATGAAGCACCAGCTGCAGACACTGAGAGATGTGAGGAAGCTGCATCAATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029084