BGIOSGA029101

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Revision as of 08:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029101| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029101, complete gene.| tag = OJ1521_...")
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Gene Name

BGIOSGA029101

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029101, complete gene.

LocusTag

OJ1521_G02.20

Ensembl Transcript ID

BGIOSGA029101-TA

Ensembl Protein ID

BGIOSGA029101-PA

Length

5062

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28944817..28949878

Sequence Coding Region

28944817..28945158,28946329..28946410,28947066..28947160,28947788..28947859,28947939..28948018
,28948095..28948194,28948770..28948817,28948932..28949000,28949397..28949537
,28949624..28949878

Genome Context

<gbrowseImage1> name=IndicaChromosome08:28944817..28949878 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:28944817..28949878 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGGACGACGCCCCGGACTCCACCACCTCCTCCTCATCCGCCTCATCCGCCTCCGCCCCCGCCCCCTCCGCCGCCCGCCTCAACGCCGCCGCCCCGGAGTTCACCCCTCGATCCGCCGCCCACCACCACCACCACCACGCCAACCCTCGCCGCCAGCACCGCGGGGGCGGGGGTGGGGCCTACCACCACCACCAGCAGCACTACCAGCCGCACCACCACCACCAGCACCACCAGCACTGGCAACACTACGGGGAGGATGAGGGGGACGCCGCGGCGGCCGGGGCGGTGGGAGAAGGAGGGATCCCGGAGGATGTGGCTCGTCGGGTCGTCAAGCAGGTGGAATTTTACTTCAGTGATGTCAATCTGGCTACAACAGAACATTTGATGAAATTCATGATTAGAGATCCAGAGGGATTTGTGCCAATGTCTGTAGTTGCATCTTTTAGGAAGATCCGGGAGTTAGTTAGTGAGAGATCCGCATTGGCTGCAGTATTGCGGACGTCAGCAGAGCTGGTTGTTTCAGATGATGGAAAAAGGGTTAGACGTCGAGTGCTCTTTACTGAGGCGGATGCTGAAGAAGTTCAGTCACGCATTGTTGTTGCTGAAAATTTGCGTGAAGAGCACCGCTATCCAAATCTTATGAAGATTTTCTCAGCTTTTGGGAGTGTGAAATCAATTCGTACTTGCTATCCACAAGGTGGGATTGATGGTGCTGGAACTTCTACTGGCAAAGCATCAAAGATTGAGATGTTGTTTGCTAATAAGGTGCATGCTTTTGTGGAGTATGAAACTGTTGAAGATGCTGAAAAGGCAGTTTCTGAATTCAGTAGTGGGAGAAGCTGGAGAGATGGGATTAGAGTCCGCTCACTGCTTGGTTGCCTGAAACAAGCCATGGGTCAAGGAAGAAGAGGTGGAGATGAGGTGGATGCTGCAGACGAAGATGACCCTGAAACAACTGACCATCCACAAGACTACGAAACAGAGGATGCATCCCAGATTTCAGAAGCACATCTTGATCATCAGGCTGATGATGGCTACCATGACAAAGGCGGGATGAGGCACGGGAGAGGGAGAGGACGTGGTGGAAGAGGGCGTGGCCGTGGTCAGTACTATGGCCATAGCCGGGATGCCAATCATCCAATTGGCACTCCTCCATCGAATCACAGTGCTCTTGCTGATCATCCTTCAAAGCCACCCCCTGGTCCTCGTATGCCAGATGGCACAAGAGGATTTACCATGGGGCGAGGAAAGCCACTCAATCCTACCAATGCTGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MAQDDAPDSTTSSSSASSASAPAPSAARLNAAAPEFTPRSAAHHHHHHANPRRQHRGGGGGAYHHHQQHYQPHHHHQHHQHWQHYGEDEGDAAAAGAVGEGGIPEDVARRVVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLRTSAELVVSDDGKRVRRRVLFTEADAEEVQSRIVVAENLREEHRYPNLMKIFSAFGSVKSIRTCYPQGGIDGAGTSTGKASKIEMLFANKVHAFVEYETVEDAEKAVSEFSSGRSWRDGIRVRSLLGCLKQAMGQGRRGGDEVDAADEDDPETTDHPQDYETEDASQISEAHLDHQADDGYHDKGGMRHGRGRGRGGRGRGRGQYYGHSRDANHPIGTPPSNHSALADHPSKPPPGPRMPDGTRGFTMGRGKPLNPTNAV</aaseq>

Gene Sequence

<dnaseqindica>1..342#1513..1594#2250..2344#2972..3043#3123..3202#3279..3378#3954..4001#4116..4184#4581..4721#4808..5062#ATGGCGCAGGACGACGCCCCGGACTCCACCACCTCCTCCTCATCCGCCTCATCCGCCTCCGCCCCCGCCCCCTCCGCCGCCCGCCTCAACGCCGCCGCCCCGGAGTTCACCCCTCGATCCGCCGCCCACCACCACCACCACCACGCCAACCCTCGCCGCCAGCACCGCGGGGGCGGGGGTGGGGCCTACCACCACCACCAGCAGCACTACCAGCCGCACCACCACCACCAGCACCACCAGCACTGGCAACACTACGGGGAGGATGAGGGGGACGCCGCGGCGGCCGGGGCGGTGGGAGAAGGAGGGATCCCGGAGGATGTGGCTCGTCGGGTCGTCAAGCAGGTAGCGCTCCCCCCCACCCACCTGATGGATGATGTGTTTACTGCCTTTTGCCATGCTGTTTGGTGCTGATTATGAGGATTGGTTTGGTGTGGAATCTCAAGTTTCAACCGATAAAGCTTGATCTTTTGATCAACGCAAGGGTTAGATTGGGTCGTCTATGGAGTAGAAATAGGCATGTAGGAAGTGTAGCTTAACCCAGTGATTGCAAGTGAAACGATGGAATTAGTGTGACTTTACACTTCTGTTGATTTGTATGCAAGTTTGATCTTTAGTTACAGATGTATGCACTAGAGGGATGATGTCTATAGATATTTGTTCCTTAAAACTGTTTATTGCCTATTATTTTGCTTATTCTTGTATTTCTGAAACTACGAGGATAAAAAATATTACTTCACAGATCACTGGCACCTTGATTGTCCTGTGTGCACTAGTAAGGGGCTAAGGTGGAATCTAGGACGAGTAAAACAGGGAATGTCTGTTAGAGATTGCTATTTTTAGAAAATGCACTGTAATTCTGCACTTCTTTTCTTGGAGAACACTATAGGGTTTATAGTCTATACAAATCAGATAGGGTGGGGATGGCGGGAAGGGTGCATGTTGTCTTTCCACATGGCGCGGTCTGCTGCATTTACGTGTGTGTGGGGTTTGGGTCGAGTGACATGTCTCATGCCTGCCAACGAGCAAATATGGAATAACAAGATATGCATGTTTGTGATGTTTGGCAAACATGATGGGCCTCAGTATGATTTATTAGCGACAGGGTGTAAAAACGACAAAACCATATCATGTCGTCTTGCTGAAGCTCGTAATTGCTGCATGCATAGTACCATGAGGAGTTATACTGTTTTCTTTTTTGAGGATAATAACTTAGGAAATAGAAATAGTGCAGTTCTCCATCTATTTTATGATTGTTCCTCTTTGCATCTTTCTGAAGGGGAGAAATGGAGAGAGAAATCAATTCTCTTCTTTTGTATTGTTTACCTTCTGCATCTTTTTACTTTCTTCTTAGTTTACCTTTTCTCTGATCATTGAAAGTATGATATTAACTTCGTCTTATATTAATTCCTTTTTTTGTTGTTTATTAGTGCAATCAAGCTGTTATGGGATGCTTGATTTGCACCTATATAAGTGGTACACCCTTGGTTTGATTGTATTTTAAAACCTTGACAGGTGGAATTTTACTTCAGTGATGTCAATCTGGCTACAACAGAACATTTGATGAAATTCATGATTAGAGATCCAGAGGGATTTGGTGAGTCAACTGTTCAATTTCAAATAGACCGCCTGATTGTGCTTTCCACCTTCCTATTTTCCTTTTGAAATGAGAACCACCATAATGTTTTAGGGTTATTCTCACTTATACCTTAACAAACCTACGACAAAAATCGCTGTCCACCTTCATGTCTATATTTTTCTTTAAATGTTTGGTGCCAGCGATAATTTCAAATTTGTCATGCAATATATGATGATAAAATTCCTGTGAACTACTGCACTACGTATTGCTAATTAGGCTATTTTTAATTGTATTCTACTGATATAGATATCTTTAACCTGGGAATGCATTCTTCCGTATGAATTGATGCACATTGATATTACTGCAGTTATGCATGACTGTTGCACCAGCATTGATGTTTGACAATGTTCTGCTGTAAAAAGACTACTGGCACATTTAGAAATGGGCGAATATTATGTTGAAGCATTCTAATATATTTGCACCTTTTGTTGTACCACTATTGGAATCTGCATATACTTGCTTGATATAACTACTGTTCACCAAACAACAGTTGATACTTTTGAGCTGCATCATATCATTAAGTGGTGTACATGAATTTAGCACATGCTTTCCTACACATGATATTTGTTGGCTCATATTTTCTGATGGCATTGACATGTCTTCTGTTTTCCAGTGCCAATGTCTGTAGTTGCATCTTTTAGGAAGATCCGGGAGTTAGTTAGTGAGAGATCCGCATTGGCTGCAGTATTGCGGACGTCAGCAGAGCTGGTAAGCATCTTATTTAGGCCCTGTTTGTTTTAACTTAAGATTATTGTAATCTATATTATTAAATCAGATTACTATAAGCTGGATTATAATAAGCTGACATAGAATAAGCTGTGAGCTATTTGTTTCTCTAGATTATTGGAGGCATCTAAGGGTAGTGGGTCTTTAGCCACCAATAATTTGGAAAAAGCTCCTCTAGAGGAGATTATTAGATTATACTAATCTGGCTTATAAATCATAATAATCTACTTGTTTGTTTCAGTTTACTCCTAATAATCCAGTTTATAATAATCCTAAGCTGAATCAAATAGGGCCTTAATGACTTTTTAATTTTTTTTTCCTTCCGATATGCCTGTTCATCCTATTGTTGACACTTGACACAGCCCACCCTTCATTTTAATTAAAGATGCATTATACGTTATGAACCTTTGCTCAGTAAGGAATTATATTTAGTAAACAAATTATTTTTTTAATAAGTGCATGAATATAAGCGAATAAACACACACCTTTTCATCAATCTGTACCATCCTAATTTAAGATTCAGTTTACCAATCTCATTTTCCTCTCATTCTGAATGGCTTCTATTATTCTCTACCAAGATCCTAAGACTATAGATCTTCCTATATACAGGTTGTTTCAGATGATGGAAAAAGGGTTAGACGTCGAGTGCTCTTTACTGAGGCGGATGCTGAAGAAGTTCAGGTCAGAATCTAATTAATCAAATAAAATCTATTCATTATATATGTATGGGAACTGAATTTTCTGTTATATGTGTACTCAGTCACGCATTGTTGTTGCTGAAAATTTGCGTGAAGAGCACCGCTATCCAAATCTTATGAAGATTTTCTCAGCTTTTGGGAGGTATGCATCAATGCATGTCTTTGAGCACAAATATATGCCAAATGTGGTGTTGAACACATGATGTTCTATATTGCAGTGTGAAATCAATTCGTACTTGCTATCCACAAGGTGGGATTGATGGTGCTGGAACTTCTACTGGCAAAGCATCAAAGATTGAGATGTTGTTTGCTAATAAGGTAATGTATCATGGTATATCTAACTTCTAAAGGAACACGGAAAGTTTATTAGTTATTGCATATACTTGTTCTAGCTCTGTTAATAAATATTTGACACCATACAAGAATGTGTATTCCAACTTCTTAATACTTGATCACTAATACATTTACTATTTGGATTGATATGTGCAGATGTTAGCATTAGATTTCTCATGGGATAGTTTCACATTATGGTAGCTTCATATATTCTTATTTAGTGTTTTAAAAAAAAGTTCTACAAGGCTGCTTACAAGGTCGCATACATACAAGGTACAGGTGCCCTAACCTTGTACCGTGTAAGCTGCATATGTGGCCGATTACACCACATAAGCCCTACAAGGTGGGGTGACCACACGAAACCATGTTTTTTAAAACATTGCTTACTATTTCATAGATAGAAGTGATGATCAAAAGTTGCATGTTGGTGACCTTGTCCATGTCCGAAATGTCATACTTGAAAAGAGGGATAAGCAATGAAATACTATTTTGGAAGGCATTTCAAGTTTCAACACCAGTACCTTGATTTCGTCCCTCATTTTTTTTGGCTTTACTTGCAGGTGCATGCTTTTGTGGAGTATGAAACTGTTGAAGATGCTGAAAAGGCAGTATGTCTTCTTGATTTCTCTAGCCATTTGTTTTTTTTTTCTAGGAATTATTTTGAGGTGCTTTGGTAGTTGCCATCAACACAATTTAAAGGAACTCTGTTTTTCTGTATACAGGTTTCTGAATTCAGTAGTGGGAGAAGCTGGAGAGATGGGATTAGAGTCCGCTCACTGCTTGGTTGCCTGGTACTTTAACGGACCCTACACAATGCAACTTGTTCTCCCTTAACCATGGACTGATTTTTAAAATGCATTTGCGATTCACAATTGTCCTTTATGCACTACTTGTGTTTCCTGACTAGATCTTAGTCATTAACATTTATATTTCATTAATCAGCAATACTGGGTGGTTTGTTCATTCTTGATTTAGTTACTTCTATATTTAACTGATGGGTAAACATTAGGTGTAAGCTTGTTTTTGGTCATTTCATCATTTATCAACAGATATAGCTCCCAGAAAAACATGTTTGACTAGCTTAGTAAGATTTAACATTCCTACATTACTATGCATGTTATTTTATTTATTTGTAAAATAGAAGATTCTTAAATCGTTAAACATTTGTTTTCATTAATTGTCATTAGAAACAAGCCATGGGTCAAGGAAGAAGAGGTGGAGATGAGGTGGATGCTGCAGACGAAGATGACCCTGAAACAACTGACCATCCACAAGACTACGAAACAGAGGATGCATCCCAGATTTCAGAAGCACATCTTGATCATCAGGTACTTTAAATGATCCTCTCCTGCTCACCATTATTGTGCGCCAGAATCAAGTGTGGATATTATAACGACATGTATAAATTTCATAGGCTGATGATGGCTACCATGACAAAGGCGGGATGAGGCACGGGAGAGGGAGAGGACGTGGTGGAAGAGGGCGTGGCCGTGGTCAGTACTATGGCCATAGCCGGGATGCCAATCATCCAATTGGCACTCCTCCATCGAATCACAGTGCTCTTGCTGATCATCCTTCAAAGCCACCCCCTGGTCCTCGTATGCCAGATGGCACAAGAGGATTTACCATGGGGCGAGGAAAGCCACTCAATCCTACCAATGCTGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029101