BGIOSGA029171

From RiceWiki
Revision as of 08:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029171| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029171, complete gene.| tag = OS08G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029171

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029171, complete gene.

LocusTag

OS08G0555200

Ensembl Transcript ID

BGIOSGA029171-TA

Ensembl Protein ID

BGIOSGA029171-PA

Length

1943

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29674430..29676372

Sequence Coding Region

29674430..29674477,29674720..29674832,29674939..29675092,29675215..29676372

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29674430..29676372 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29674430..29676372 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTTGGATCCTGTCTGGATTCCGATGGGAACTCCTTGCGCTTTGAGCAAGGATGAGAAGTACTTTATTCATAACCACCTGGCATTTTTAGTGAAGTATCACAAGGATGAAAATTCAGATCTCTCTAGAATTGTTGGGTTCGAGGTCAAACCATTTAGTGTTAAACACCAATTCGAAGAGAAATGGAATGATGCAAACACTCGTTTGAGCACATGTGATCCCCATGCCAACAAAATAGTAATAAACTCAGATACTCCTCAAGAGGTTGAAGCTGGGAAGGATATCATATTCACATATGATGTTGGCTTTGAGGAAAGTGATATCAAGTGGGCTTCTCGCTGGGACACCTATCTGCTTATGACAGATGATCAAATTCACTGGTTCTCTATTGTGAACTCTCTCATGATCGTGCTTTTCTTATCTGGAATGGTGGCCATGATCATGCTCCGCACTCTATATAGAGATATCTCCAGGTACAATCAACTTGAGACTGAAGAAGAAGCCCAGGAGGAAACTGGTTGGAAGCTTGTTCATGGAGATGTGTTCCGCCCACCAACTAACTCTGACTTACTCTGTGTCTATGTTGGCACTGGTGTCCAGTTCTTTGGTATGCTGCTGGTTACCATGATGTTTGCTGTCTTGGGTTTCCTTTCTCCATCAAACCGTGGAGGATTGATGACTGCGATGCTGCTCATTTGGGTCTTGATGGGGCTGTTTGCTGGATATGCTTCTTCCCGACTCTATAAGATGTTTAAAGGATCAGAATGGAAGAGCATCACCTTGAAGACTGCTTTCCTGTTTCCGGGAATTGCTTTTGGTATTTTCTTCGTCTTGAATGCTCTTATATGGGGGGAGAAATCATCAGGTGCTGTCCCTTTCTCCACAATGTTTGCCTTGGTGCTTCTTTGGTTCGGTATCTCGGTTCCACTTGTCTTTGTTGGGAGCTATCTTGGTTTCAAGAAACCTGCCATTGAGGCTCCAGTGAAGACCAACAAAATCCCGAGACAGGTCCCAGAGCAGGCTTGGTACATGAACCCTGCCTTCACCATTCTTATTGGCGGGATTCTTCCATTCGGAGCAGTTTTCATTGAGCTATTTTTCATCCTCACTTCAATCTGGCTTCACCAGTTCTACTACATCTTCGGCTTCCTTTTCCTCGTGTTCATTATCCTCATTATCACTTGTGCGGAGATTGCAATCGTGCTGTGCTACTTCCAACTGTGCAGTGAGGATTACATGTGGTGGTGGAGGTCCTATCTCACCTCAGGATCATCTGCGATCTATCTCTTCCTGTATGCTGGGTTCTACTTCTTCACCAAGCTGCAGATTACTAAACTGGTGTCAGGCATTCTGTACTTCGGCTACATGCTTCTGGCCTCATTCTCTTTCTTCGTGCTCACTGGCACAATTGGTTTCTGTGCCTGCTTGTGGTTCACGAGATTGATTTACTCATCTGTGAAGATTGAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDLDPVWIPMGTPCALSKDEKYFIHNHLAFLVKYHKDENSDLSRIVGFEVKPFSVKHQFEEKWNDANTRLSTCDPHANKIVINSDTPQEVEAGKDIIFTYDVGFEESDIKWASRWDTYLLMTDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISRYNQLETEEEAQEETGWKLVHGDVFRPPTNSDLLCVYVGTGVQFFGMLLVTMMFAVLGFLSPSNRGGLMTAMLLIWVLMGLFAGYASSRLYKMFKGSEWKSITLKTAFLFPGIAFGIFFVLNALIWGEKSSGAVPFSTMFALVLLWFGISVPLVFVGSYLGFKKPAIEAPVKTNKIPRQVPEQAWYMNPAFTILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFLVFIILIITCAEIAIVLCYFQLCSEDYMWWWRSYLTSGSSAIYLFLYAGFYFFTKLQITKLVSGILYFGYMLLASFSFFVLTGTIGFCACLWFTRLIYSSVKIE</aaseq>

Gene Sequence

<dnaseqindica>1..48#291..403#510..663#786..1943#ATGGACTTGGATCCTGTCTGGATTCCGATGGGAACTCCTTGCGCTTTGGTGTGATTGGTTGATTAGCTAGATTTAGATTTGTCCACTTGTCTGTGTCATGGTTAATTCCACTCGTTTAGATGCGCAAGACGAAACGATTAGGCGCCAGATCTGTTGCTGCTCCTCACATCATGATTGCGTGTAGCTATCTGCATTTGCAGATAAGATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATGATCTTACAAAAATATATTTTGCAGAGCAAGGATGAGAAGTACTTTATTCATAACCACCTGGCATTTTTAGTGAAGTATCACAAGGATGAAAATTCAGATCTCTCTAGAATTGTTGGGTTCGAGGTCAAACCATTTAGGTTCGTTCACTTAACCTTTTCATGTTTGTTTCATACAACGTCTTTGACATATTGGGCAAATTTTTTATTAGTCCCTCATGTGCATTTACTAAATTCCCTGACTCAGTGTTAAACACCAATTCGAAGAGAAATGGAATGATGCAAACACTCGTTTGAGCACATGTGATCCCCATGCCAACAAAATAGTAATAAACTCAGATACTCCTCAAGAGGTTGAAGCTGGGAAGGATATCATATTCACATATGATGTTGGCTTTGAGGTGATATTTTCATGACATCTCTTCTTTTCTTTTGTACCGTGACTCTGTTCCTTCACAGCTGTTCTTCGAGTGTTATCTTTATTTAAACAATATCTTTTGGTTTTCTTGGCTGGGTCTTGTAGGAAAGTGATATCAAGTGGGCTTCTCGCTGGGACACCTATCTGCTTATGACAGATGATCAAATTCACTGGTTCTCTATTGTGAACTCTCTCATGATCGTGCTTTTCTTATCTGGAATGGTGGCCATGATCATGCTCCGCACTCTATATAGAGATATCTCCAGGTACAATCAACTTGAGACTGAAGAAGAAGCCCAGGAGGAAACTGGTTGGAAGCTTGTTCATGGAGATGTGTTCCGCCCACCAACTAACTCTGACTTACTCTGTGTCTATGTTGGCACTGGTGTCCAGTTCTTTGGTATGCTGCTGGTTACCATGATGTTTGCTGTCTTGGGTTTCCTTTCTCCATCAAACCGTGGAGGATTGATGACTGCGATGCTGCTCATTTGGGTCTTGATGGGGCTGTTTGCTGGATATGCTTCTTCCCGACTCTATAAGATGTTTAAAGGATCAGAATGGAAGAGCATCACCTTGAAGACTGCTTTCCTGTTTCCGGGAATTGCTTTTGGTATTTTCTTCGTCTTGAATGCTCTTATATGGGGGGAGAAATCATCAGGTGCTGTCCCTTTCTCCACAATGTTTGCCTTGGTGCTTCTTTGGTTCGGTATCTCGGTTCCACTTGTCTTTGTTGGGAGCTATCTTGGTTTCAAGAAACCTGCCATTGAGGCTCCAGTGAAGACCAACAAAATCCCGAGACAGGTCCCAGAGCAGGCTTGGTACATGAACCCTGCCTTCACCATTCTTATTGGCGGGATTCTTCCATTCGGAGCAGTTTTCATTGAGCTATTTTTCATCCTCACTTCAATCTGGCTTCACCAGTTCTACTACATCTTCGGCTTCCTTTTCCTCGTGTTCATTATCCTCATTATCACTTGTGCGGAGATTGCAATCGTGCTGTGCTACTTCCAACTGTGCAGTGAGGATTACATGTGGTGGTGGAGGTCCTATCTCACCTCAGGATCATCTGCGATCTATCTCTTCCTGTATGCTGGGTTCTACTTCTTCACCAAGCTGCAGATTACTAAACTGGTGTCAGGCATTCTGTACTTCGGCTACATGCTTCTGGCCTCATTCTCTTTCTTCGTGCTCACTGGCACAATTGGTTTCTGTGCCTGCTTGTGGTTCACGAGATTGATTTACTCATCTGTGAAGATTGAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029171