BGIOSGA029439

From RiceWiki
Revision as of 09:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029439| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029439, complete gene.| tag = P0450E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029439

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029439, complete gene.

LocusTag

P0450E05.35

Ensembl Transcript ID

BGIOSGA029439-TA

Ensembl Protein ID

BGIOSGA029439-PA

Length

3966

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18886232..18890197

Sequence Coding Region

18889841..18890197,18888765..18889007,18888613..18888660,18887761..18888512,18886587..18887673
,18886232..18886447

Genome Context

<gbrowseImage1> name=IndicaChromosome09:18886232..18890197 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:18886232..18890197 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGAGCCGCCGCCGCCGCAGCCGCAGCCGCAGGAGGCGGCGGGCCGGGAGGCGTCGTCCTCCCTCTCCCCCGCGAAGGAATCTGCCGCCGGTGGAGGCGGGGGCGGGGGGTCGGGGGCACCGGAGACGAACACGCTGTGGGTGGGCAACCTGCCCGCGCAGGCGGCGGAGGACGACGTGATGGCGGCCTTCTCCCCGCACGGCGCGCTCGACTGCGTCATGGCCCGCGCGGGCCCGCGGAGCTACGCGTTCGTGCTGTTCCGCTCCGTCCCGGAGGCCCGCGCCGCCCTCGACGCGCTCCAGGGCTCCAAGGTCAAGGGCAGCGTCGTCCGGCTCGAGTTCGCCCGGCCGGCTAGAGCTGTTAAGAACTTATGGGTTGGTGGCATTAGCTCCTCAATTTCAAAGGAGGAGCTGGAGGAGGAGTTTAAGAAATTTGGAAAGGTTGATGGTATTGCATTCTCTCGTGATCAGACTTCCGCGTACATTGATTTTGACAAGCTGGAAGATGCAATTTCGGCACATAGAGCCTTGAATGGAAGAGTTTTAGGTGGACAAGAACTGTGTGTTGATTTCCAAAGGTCCAGGGGCAGAGCGGAATGGTTGGAGACAGGCAGCTTCAATGGTAGAACTGGACCTGCAAAGGGTTATGGAGTACGAAATCGAGAATCCAATCCCACCAATGTTCTTTGGGTAGGTTTCCCTAATACAGCTAAAATCAATGAGGAGGCACTTCGGCAAGCGATGGCTGTACATGGTGCTGTTACAAATACAAAAGTTTTCCCAACAAGGCAATATGCTTTTGTGGAGTTTGCAACAGTTGGGGAAGCTTCTAATGCTAAGAAAAATCTAGATGGTCGTCTTTTCAATGATCAGAGAATTCAAATTCTTTTCTCGAACAGTGAGCTTGCGCCAAATAAATTAGATAATCCAACAGCAGTTTCTGGATTTCCAAAATCAGAGATGTATTATGATGATGGTCAGTATGGCGCTTCTGATTATTTTGATCCTCGACGGGGAAGATCAAGATACTTTGAGTACAGTGGTGTCCCTGTTTCTGGTGGTATTCTTCCATCACCGGAATCTGGAAATCCTCTCTTAACTGGACGATCTGCTCAGAGTACATTCGATCCAAGAGAAGCCAAGAGGTTGCGGTTGGATGCTGCAGCTGACCCTTATGATACAAGGGCAGGTAGTGAGGGTCTTTATTCTGCTGGGTACTCTCAGCGCGAGAGTGCACGTTCTGAGAGGAGCTCAAGTCCTGCTATTCGAATCCATGGCACAGTGCACCGAACATCATACCTTGAGCACTTCTGGCGTGGTAGCATTGCCAAAGGTGGATCTCCTGTATGTCGTGCTCGCTGTTTGCCTATAAGGAAGGGTGTTGAGATACCTTTACCGGATGTTGTTAATTGTTCCGCTAGAACTGGACTAGATATGCTGGCAAAGCATTATAGAGATGCTTCAGGGTTTGATATCGTCTTCTTCTTGCCAGATAGTGAAGATGACTTTGTTTCTTACACTGAATTTTTGCGCTACTTAGGCTCAAAAAGTCGGGCAGGGGTTGTAAAGGTTGATGGGGGGACTACTTTATTTTTGGTCCCACCTTCCGATTTTTTACGAAATGTTTTGCAAGTTGATGGTCCAGAACGTCTTTACGGTGTAGTATTACATATTCCGCAAATGTCTGCTGCTGCTCCTGCTTCTGCTCCCACTCCTGCTGTACAAAGGCCACAACTAACTGCACCAGAATCACAACCTTTCTACGATGAAAGGGAAATTCCTTTGCAGAGAAGGTATAGTATGATTACGCCTAGCAACAATCACCATCGAGATGCTGATCACCGTGGATCTTTACGTGAGGATTCATTGCATCAATTGGGGCAAATTCTTGCACGACCTCGGGTGGATGAAGGACAAGTAGTTCAGCCAAACCTTGCCGGTATCCCTACAAACGCAGGACTACAGGTACAGCCTTCACTCCAGCCTGATATGATAGCCACTTTAGCTAAACTTTTGCCAAGTGGGCAGTCATCAGCTCTGGTCACTGGCCAGCTTCCCCTGAGCTCAACAGACCGACCTGCATTAACCCAAATGAATGATGCATCTACTCTTGCAAAAGTATGGAGACCTGAAAATCAAGCAATGGCTTCTACTTCATCCTTAGAGCAGATCAGTAATTTCCAGCATTCAGGACAACAGTTCAGCAAACAAGCTGGAGCAGTTCATCTGCCAAACTATGGGAACTTGGCAGGTGCACAGGAGCACCCAACACAACATAGTGCTTACAATCCTGAAATGACTCTAAACTTGCCATCACCACCACCACCTCCTACGCTGCCACCCAGTTCTGCTATATTATCATCGCAAGTTGGACACAGTTTGCCTACACAGATGAGTCAGCAACAGTATCAACCAGAGCAGTATTATATGACTCAAAGCAATTATGGTCAATTGGCCACAGTTAGCAGTTCTAATCTTCAGGCGCACCATCAACAAATTGTTGCGACTCCTGCTGCACAAGCTCCTGTTGCTGCGCAATTCCCTCCTGCTATGCAGGCTCCTGCTGCCGCACAAGCTCCTGTTGCTGCACAAGCTTCTGCTGACGAGGCAGAACGGAACAGGAAGTATCAGGCGACTCTTCAGTTGGCTCAGCGCCTGTTGGGTCAGCTACAACAGAAGCCTGGAAATCAACCTTAA</cdnaseq>

Protein Sequence

<aaseq>MSSEPPPPQPQPQEAAGREASSSLSPAKESAAGGGGGGGSGAPETNTLWVGNLPAQAAEDDVMAAFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDALQGSKVKGSVVRLEFARPARAVKNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRVLGGQELCVDFQRSRGRAEWLETGSFNGRTGPAKGYGVRNRESNPTNVLWVGFPNTAKINEEALRQAMAVHGAVTNTKVFPTRQYAFVEFATVGEASNAKKNLDGRLFNDQRIQILFSNSELAPNKLDNPTAVSGFPKSEMYYDDGQYGASDYFDPRRGRSRYFEYSGVPVSGGILPSPESGNPLLTGRSAQSTFDPREAKRLRLDAAADPYDTRAGSEGLYSAGYSQRESARSERSSSPAIRIHGTVHRTSYLEHFWRGSIAKGGSPVCRARCLPIRKGVEIPLPDVVNCSARTGLDMLAKHYRDASGFDIVFFLPDSEDDFVSYTEFLRYLGSKSRAGVVKVDGGTTLFLVPPSDFLRNVLQVDGPERLYGVVLHIPQMSAAAPASAPTPAVQRPQLTAPESQPFYDEREIPLQRRYSMITPSNNHHRDADHRGSLREDSLHQLGQILARPRVDEGQVVQPNLAGIPTNAGLQVQPSLQPDMIATLAKLLPSGQSSALVTGQLPLSSTDRPALTQMNDASTLAKVWRPENQAMASTSSLEQISNFQHSGQQFSKQAGAVHLPNYGNLAGAQEHPTQHSAYNPEMTLNLPSPPPPPTLPPSSAILSSQVGHSLPTQMSQQQYQPEQYYMTQSNYGQLATVSSSNLQAHHQQIVATPAAQAPVAAQFPPAMQAPAAAQAPVAAQASADEAERNRKYQATLQLAQRLLGQLQQKPGNQP</aaseq>

Gene Sequence

<dnaseqindica>1..357#1191..1433#1538..1585#1686..2437#2525..3611#3751..3966#ATGTCGTCGGAGCCGCCGCCGCCGCAGCCGCAGCCGCAGGAGGCGGCGGGCCGGGAGGCGTCGTCCTCCCTCTCCCCCGCGAAGGAATCTGCCGCCGGTGGAGGCGGGGGCGGGGGGTCGGGGGCACCGGAGACGAACACGCTGTGGGTGGGCAACCTGCCCGCGCAGGCGGCGGAGGACGACGTGATGGCGGCCTTCTCCCCGCACGGCGCGCTCGACTGCGTCATGGCCCGCGCGGGCCCGCGGAGCTACGCGTTCGTGCTGTTCCGCTCCGTCCCGGAGGCCCGCGCCGCCCTCGACGCGCTCCAGGGCTCCAAGGTCAAGGGCAGCGTCGTCCGGCTCGAGTTCGCCCGGCCGGTGAGATGCCTTCTCTTCTTACACCTTGCCTGGATCTACTGTCTCCTTAGATTTCCCCCCATGAGGTGAGGCTGGTGCCTCGGTGATGTGATTTTTGTGGCGGTAACTGGGGTTTCGATGAGTGTGTTTTGTAGCAGCCTCGCATAGGAGGAAACGATTTTGTGTTTTTATCTGGTGCCCTCACGGATTGTGGTGAGGCTGGTGCCTCGGTGATGTGATTTTTGCCGCGGTAACTAGGGTTTTGATGTGTGTGCTTTCTATCCTCGCATAAGAGGAAACGATTTTATGGCGCTGCTGATTAGCTAGATTTAGGTGGTGTCGAACTTGGGCTTATGATACACAGATTTGTTTTGTGGTTGCAAAGTTAAATAAATGCTGTTTACTGATCCTTAGTTGTTTTTGTGGGAAACGATTTTGTGGCATACATGCTGCTGCCAGGCTGTGCAATTAGAGATATATGCACGAAACCGGCTGCAATCTTACTTTGATGTTATCTTTACCCTAGCTTTATGTGATTCAGCATCTACTCCGTGTTATATGGAAGAGATCATTGTCTACTGAATTGGGACGGTTGCTTGTTTCATGACTAGTGACATGCTTATACGGGAAATTGTTTCAGATGTCTTGAGTTCCCTATGTTTTAACATGCTATAATCTACAGTGTCTTGACTCTATTCTGTGTTTTGATTTTAGTAAACACAGGCATTTCTTTTGCTCTCTTGACAGTTTTTATTCCTAGTTCTATTTAGACGATGATTTTGTGTTTCCCATTTCTTTGCTGAAATACGTGCCATGCCTTCTGATAAACCATGTTCCTTGATTTATCTTTTCAGGCTAGAGCTGTTAAGAACTTATGGGTTGGTGGCATTAGCTCCTCAATTTCAAAGGAGGAGCTGGAGGAGGAGTTTAAGAAATTTGGAAAGGTTGATGGTATTGCATTCTCTCGTGATCAGACTTCCGCGTACATTGATTTTGACAAGCTGGAAGATGCAATTTCGGCACATAGAGCCTTGAATGGAAGAGTTTTAGGTGGACAAGAACTGTGTGTTGATTTCCAAAGGTCCAGGGGCAGAGCGGTGTGTATCCATTAATTATATGTATTGATATACTGTTTGCATTTTCTTGGTAACAAGCTTATGAATGTTCTTGTTGCATGTAAATATTTCTGAATTTTTTTTAGGAATGGTTGGAGACAGGCAGCTTCAATGGTAGAACTGGACCTGCAAAGGTATTTTCTGTTTGCATTTCCTTTCTTGTATTACTGGTTGTTTTTCTGTTATGTCTGCTGATGTTGCTAACTATCGTTTCATATTCTGTTGGCATGTCAGGGTTATGGAGTACGAAATCGAGAATCCAATCCCACCAATGTTCTTTGGGTAGGTTTCCCTAATACAGCTAAAATCAATGAGGAGGCACTTCGGCAAGCGATGGCTGTACATGGTGCTGTTACAAATACAAAAGTTTTCCCAACAAGGCAATATGCTTTTGTGGAGTTTGCAACAGTTGGGGAAGCTTCTAATGCTAAGAAAAATCTAGATGGTCGTCTTTTCAATGATCAGAGAATTCAAATTCTTTTCTCGAACAGTGAGCTTGCGCCAAATAAATTAGATAATCCAACAGCAGTTTCTGGATTTCCAAAATCAGAGATGTATTATGATGATGGTCAGTATGGCGCTTCTGATTATTTTGATCCTCGACGGGGAAGATCAAGATACTTTGAGTACAGTGGTGTCCCTGTTTCTGGTGGTATTCTTCCATCACCGGAATCTGGAAATCCTCTCTTAACTGGACGATCTGCTCAGAGTACATTCGATCCAAGAGAAGCCAAGAGGTTGCGGTTGGATGCTGCAGCTGACCCTTATGATACAAGGGCAGGTAGTGAGGGTCTTTATTCTGCTGGGTACTCTCAGCGCGAGAGTGCACGTTCTGAGAGGAGCTCAAGTCCTGCTATTCGAATCCATGGCACAGTGCACCGAACATCATACCTTGAGCACTTCTGGCGTGGTAGCATTGCCAAAGGTGGATCTCCTGTATGTCGTGCTCGCTGTTTGCCTATAAGGAAGGGTGTTGAGATACCTTTGTATGTATACACTCACCATCTTAATCTTGTTCTCTACAGTTGATTTCTATAGCCTCTGGATCTTACACATATTCCACTGTTTTGCAGACCGGATGTTGTTAATTGTTCCGCTAGAACTGGACTAGATATGCTGGCAAAGCATTATAGAGATGCTTCAGGGTTTGATATCGTCTTCTTCTTGCCAGATAGTGAAGATGACTTTGTTTCTTACACTGAATTTTTGCGCTACTTAGGCTCAAAAAGTCGGGCAGGGGTTGTAAAGGTTGATGGGGGGACTACTTTATTTTTGGTCCCACCTTCCGATTTTTTACGAAATGTTTTGCAAGTTGATGGTCCAGAACGTCTTTACGGTGTAGTATTACATATTCCGCAAATGTCTGCTGCTGCTCCTGCTTCTGCTCCCACTCCTGCTGTACAAAGGCCACAACTAACTGCACCAGAATCACAACCTTTCTACGATGAAAGGGAAATTCCTTTGCAGAGAAGGTATAGTATGATTACGCCTAGCAACAATCACCATCGAGATGCTGATCACCGTGGATCTTTACGTGAGGATTCATTGCATCAATTGGGGCAAATTCTTGCACGACCTCGGGTGGATGAAGGACAAGTAGTTCAGCCAAACCTTGCCGGTATCCCTACAAACGCAGGACTACAGGTACAGCCTTCACTCCAGCCTGATATGATAGCCACTTTAGCTAAACTTTTGCCAAGTGGGCAGTCATCAGCTCTGGTCACTGGCCAGCTTCCCCTGAGCTCAACAGACCGACCTGCATTAACCCAAATGAATGATGCATCTACTCTTGCAAAAGTATGGAGACCTGAAAATCAAGCAATGGCTTCTACTTCATCCTTAGAGCAGATCAGTAATTTCCAGCATTCAGGACAACAGTTCAGCAAACAAGCTGGAGCAGTTCATCTGCCAAACTATGGGAACTTGGCAGGTGCACAGGAGCACCCAACACAACATAGTGCTTACAATCCTGAAATGACTCTAAACTTGCCATCACCACCACCACCTCCTACGCTGCCACCCAGTTCTGCTATATTATCATCGCAAGTTGGACACAGTTTGCCTACACAGATGAGTCAGCAACAGTATCAACCAGAGCAGTATTATATGACTCAAAGCAATTATGGTCAATTGGCCACAGTTAGCAGTTCTAATCTTCAGGTCAGCAATTCTAACATCCCATTTCTTCCTTATTCCCAAGTAAACCTTGCCAACAAATAATCAGATAGGGTTTTTGGCAGTGTTTCAGCATGCTTTGACTTTGCCTAATGATAGGGTAAACTATGGTTTCTCTTTACAGGCGCACCATCAACAAATTGTTGCGACTCCTGCTGCACAAGCTCCTGTTGCTGCGCAATTCCCTCCTGCTATGCAGGCTCCTGCTGCCGCACAAGCTCCTGTTGCTGCACAAGCTTCTGCTGACGAGGCAGAACGGAACAGGAAGTATCAGGCGACTCTTCAGTTGGCTCAGCGCCTGTTGGGTCAGCTACAACAGAAGCCTGGAAATCAACCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029439