BGIOSGA029754

From RiceWiki
Revision as of 09:31, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029754| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029754, complete gene.| tag = P0701F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029754

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029754, complete gene.

LocusTag

P0701F11.45

Ensembl Transcript ID

BGIOSGA029754-TA

Ensembl Protein ID

BGIOSGA029754-PA

Length

3669

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:13638440..13642108

Sequence Coding Region

13641574..13642108,13639516..13639573,13639338..13639421,13639090..13639231,13638440..13638856

Genome Context

<gbrowseImage1> name=IndicaChromosome09:13638440..13642108 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:13638440..13642108 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGCCGGTGGCGTCGTCCAGGGTGGCCGCCGGCGCCGGCGCCGCGCGGAGGTCGTCCCCGTCTCCTGGCCCGAGGCCGGCTGCTGGAAGCAGCGTCGTCAGGGACAAGGACGCTACTACCATGATGAGGAGGAGGCTGTACCAGCAGCAGCACCCGCCGTCGTCGTCCGGCGCAAGGGAGCCGGGGGTGCCGTCCATGCTGCTGCGCCGTGCGGCGGGCGGCGGCGGCGGCGGGCCGCGGTCGCTGAACGTGTCGTGCGCGTCGGAGGCGTCAAACGACTCGTTCTGCAGCCGGGCGTCCACCGGCAGGATCGGGCGCCGGCCGGTGGGCCCGCCCGGCGTCGGCGCCGCGCACACCCGGCGGAGGGCGGCCGGGTCGGCGGGGCTGCCCGCCGCTCGCCCGGTGGCCCGGAAGGCGGCGGCCAGCGTTGCGCCGGACGTCGCGGCGTCGCTGATCGCCGTGGCGAACGGCGAGGCCGCGCCGGCGTTGACGGGGCCGCCGAGGTGCCCCTGGGTCACTCCTAACACTGATCCATGCTATGCTGCCTTCCATGACCATGAATGGGGAGTCCCGGTGCATGATGACAAGAAATTGTTTGAGATGCTAGTCCTGTCTGGTGCATTGGCTGAAATGACATGGCCTGCAATTCTCAGCAAGAGGGAAACATTCAAGGAGGTTTTCATGGACTTTGATCCTCTATTGGTAGCAAAGCTAAGTGAGAGGAAAATTCTGGGGCCATGCAGCCCTGCAAGGTCTCTCCTGTCAGAGCATAGGCTGCGTATAATCATTGAAAATGCACAGGAGGTCCTAAAGGTCATAGAGGAGTTTGGATCATTTGACAACTACTGCTGGGGCTTCCTGAACAGCAAGCCGATGGTTGGCAGATTCCGGCACCCGCGGGAGGTGCCGATGAAGACGCCGAAGGCCGACGCCATGAGCCAGGACCTGCTCCGGCGAGGCTTCCTCGGCGTCGGGCCGACGGTGATCTACGCCTTCATGCAGGCCGTCGGCATGGCCAACGACCACCTCGTCACCTGCTACCGCTTCGGCGAGTGCTGCAGCTGCAGCAGCAGCACTGAAGCTCCTGCCGCCGCCGCCATGGATGGCGCTGACAATCACAGCAAGAGCATGGTGAAAGATCAGGAGGTGAACATGATCTGTGGATTGGTCGAGTGCGTCAGCTTGGAGCCGTCGAGAGCTAGAGCCACCACCGTGCTCAGCATCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MSSPVASSRVAAGAGAARRSSPSPGPRPAAGSSVVRDKDATTMMRRRLYQQQHPPSSSGAREPGVPSMLLRRAAGGGGGGPRSLNVSCASEASNDSFCSRASTGRIGRRPVGPPGVGAAHTRRRAAGSAGLPAARPVARKAAASVAPDVAASLIAVANGEAAPALTGPPRCPWVTPNTDPCYAAFHDHEWGVPVHDDKKLFEMLVLSGALAEMTWPAILSKRETFKEVFMDFDPLLVAKLSERKILGPCSPARSLLSEHRLRIIIENAQEVLKVIEEFGSFDNYCWGFLNSKPMVGRFRHPREVPMKTPKADAMSQDLLRRGFLGVGPTVIYAFMQAVGMANDHLVTCYRFGECCSCSSSTEAPAAAAMDGADNHSKSMVKDQEVNMICGLVECVSLEPSRARATTVLSIS</aaseq>

Gene Sequence

<dnaseqindica>1..535#2536..2593#2688..2771#2878..3019#3253..3669#ATGTCGTCGCCGGTGGCGTCGTCCAGGGTGGCCGCCGGCGCCGGCGCCGCGCGGAGGTCGTCCCCGTCTCCTGGCCCGAGGCCGGCTGCTGGAAGCAGCGTCGTCAGGGACAAGGACGCTACTACCATGATGAGGAGGAGGCTGTACCAGCAGCAGCACCCGCCGTCGTCGTCCGGCGCAAGGGAGCCGGGGGTGCCGTCCATGCTGCTGCGCCGTGCGGCGGGCGGCGGCGGCGGCGGGCCGCGGTCGCTGAACGTGTCGTGCGCGTCGGAGGCGTCAAACGACTCGTTCTGCAGCCGGGCGTCCACCGGCAGGATCGGGCGCCGGCCGGTGGGCCCGCCCGGCGTCGGCGCCGCGCACACCCGGCGGAGGGCGGCCGGGTCGGCGGGGCTGCCCGCCGCTCGCCCGGTGGCCCGGAAGGCGGCGGCCAGCGTTGCGCCGGACGTCGCGGCGTCGCTGATCGCCGTGGCGAACGGCGAGGCCGCGCCGGCGTTGACGGGGCCGCCGAGGTGCCCCTGGGTCACTCCTAACACTGGTAAGTTTCAGTTTCACACAATTCAAACCTGCTCTAGCTACTTGGTGATTAATTATGAATTGGTTTAAGTTGATAACGAGTTCGTTCTTAATTTGCATATACTTTTTCTTTATAACTGCCAATACAGATCATCGTTATATAAAATAACTATTAATACAGAAATAATTAAAAACATGTGTTTATATATAGATTAGACTTCTTGTAATCTTGTAGGGACAATTGTACATGAAAAATCTAGGACTTCTTTTGGAGTTGAGGTTTTATGTTATTTTTTTTACAAAAAAAAATGTGTTACAAAAAGCGACCGTTTAACCTTGCTAAAATTTGAAACTTCTGCTTGATACGACGATACACTGAAATTTCCAAAAAAAAAAAAAAGTTGGCATTATTTACTCAGATACAGGTTAAGTTATACTACAGGATCAGATATAGTACATATAGGAATCCTAGTTTACTGATAATGTATAGAAGATGAGTTTTGGCACACCATACATAAATATGTTGTCTTGCTAAATAACGTACTCCATATCAGTAGGTATTCTAAAGTTTTCATTGATGCATATACGCTAAAAAAAATTACCATTAAAATTAACCAAATTGGACACACTCATTTGTGCTTCTGTACTTCATGCGTATTGCACTGTACATCAGAAAGGAGAACAACATAGTCGCCATCGAACAGTGGCTCGCATCCAAACAAGCCTGATTATTCTGTAACATAACTGTCTCAAATAATGCTGTTGCTGCATTGACAAAAGCTTCCAAACACCAGTCTTCACTCTCTTCAGCTAGCACACTAGCACAGTGCCTTCAGCAAAGCAGATATTATCCAAGTACTGAAACAAAATTTTTGCCTCCATCTTGTTAAAGGAAAATTACAACTTGTAAATTTTATGGCAAATCAACCCTGGGGGGTGATGATTATTAATTAGATCATATGACATCACACATATGGTAGGTGGTATAGAAGTACAATAAAAGATGCACTCAAATGTTTGTTGGCAGGTCTGTTATCTAGCAAGTACTTGTCAATTTTATCTTGCAAAAGGATTCCATTACCCACTAACTTGTCGGCAATGCAAAGTTTATGCAAATGGAGTTCATCAAAAGCCTCTAATTGTAGCCAATAATCTCTCAACTGAATTGAAGAATCAAGTGGCAATAGTACCCTAATAACTTTGCAGTGGTTAAACCAGATCACCCATACATATATATCTAATTTCGGATCATATACTGGCTAGTAAAATTCTTTAGTACTCCAAAAGTAATTAACCAATTCCACTACACAGGCTTAATTACCTTGACATGGATTATCATATTATGTTGCATTGTGTATACCACAATGGTGACCCAGGCTATCTTTCTCTTTTATTTTCCTTTTGCTGGCTGCGAAGATATGCCTATCATTGTTGTTCTTTAGTTTATGCAAGTACGTACAACTGCACTTTGCATCTTTTTTGCAGTGCAGTAGGCAGCTGGAAGCCATGACCACTATATTTAATCTCTCTGATGCTCTAGTATTAATTCTCATTTTCTTATTGGTACTAATTATTAGCTGCTTTTTCTTAGTTGTAGCAGTGAGTTCTGCTATTCTAGCTTCACATACTGTAGTACAGCAACTATTGAAAACTAGTATCATTCAGTTCCACATACTGTATTAGTATACGTCAACCATAAAAAAACAACTATTTGAAACGTCAAAGCAGGATCTAGGAGGCTCATCACTCTTCAGTTTCTTGTGTTCTTGGCTCTGCTCATCAGTCAGTCCTACCTGATGCCTGCTGACCTTACACCTAATTAACTGTTTAGTTGGGGCCCTTCTGTCTCTTTATGGACAAAAACATTCTGCTTGTAATCTGAAGTCCGAAGCACTCTATCAAATCTTAAATCAGTATTGTGTTTGATCCTAAAAACGTTGCAAGTTTTGTCAAAGTTTTCTTTGATTCACCGATTGCTTTCATCTGACCGTGAGGTAATCCCTGATCATGACATTGTAACAGATCCATGCTATGCTGCCTTCCATGACCATGAATGGGGAGTCCCGGTGCATGATGACAAGTACGTCTAAACCCAATCAAATTAGATACAAGTTTTACTTAGAATTCTAGTCAGATAAATTATAAAGTTACAATTTTCAGCCCTGAACCTGCAGGAAATTGTTTGAGATGCTAGTCCTGTCTGGTGCATTGGCTGAAATGACATGGCCTGCAATTCTCAGCAAGAGGGAAACATTCAAGTAAGTATTACTCCTTCTTTTACCCACTGAACTGTCTGAAGAATTGCATTCACTGATCACATCTAACAATTATAAACTTCTTAAAACTAATGAATTAATTCAACAGGGAGGTTTTCATGGACTTTGATCCTCTATTGGTAGCAAAGCTAAGTGAGAGGAAAATTCTGGGGCCATGCAGCCCTGCAAGGTCTCTCCTGTCAGAGCATAGGCTGCGTATAATCATTGAAAATGCACAGGAGGTCCTAAAGGTAAGTAAGCTGACAATCTAGATATCGATCTGTCCACATCTTAACCCTGATGATTAGCCTGAACAGCCCTGGCAACCATCATTTGCTCTTACACTTAATGACACATCTGCTTCTTTCTCGCAATCATGCAATGCCTGTCTGAATCATTCATGCAGCATGCTTAATGGCTGCCTCTTTCTGAAAATCATGCATTACATGTCTGAACTCTGAACTTTTCTGGTTGCTGTTCATAGGTCATAGAGGAGTTTGGATCATTTGACAACTACTGCTGGGGCTTCCTGAACAGCAAGCCGATGGTTGGCAGATTCCGGCACCCGCGGGAGGTGCCGATGAAGACGCCGAAGGCCGACGCCATGAGCCAGGACCTGCTCCGGCGAGGCTTCCTCGGCGTCGGGCCGACGGTGATCTACGCCTTCATGCAGGCCGTCGGCATGGCCAACGACCACCTCGTCACCTGCTACCGCTTCGGCGAGTGCTGCAGCTGCAGCAGCAGCACTGAAGCTCCTGCCGCCGCCGCCATGGATGGCGCTGACAATCACAGCAAGAGCATGGTGAAAGATCAGGAGGTGAACATGATCTGTGGATTGGTCGAGTGCGTCAGCTTGGAGCCGTCGAGAGCTAGAGCCACCACCGTGCTCAGCATCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029754