BGIOSGA029809

From RiceWiki
Revision as of 09:32, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029809| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029809, complete gene.| tag = B1339H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029809

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029809, complete gene.

LocusTag

B1339H09.17

Ensembl Transcript ID

BGIOSGA029809-TA

Ensembl Protein ID

BGIOSGA029809-PA

Length

2592

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12300068..12302659

Sequence Coding Region

12302551..12302659,12301663..12301727,12301485..12301577,12301276..12301368,12300068..12300487

Genome Context

<gbrowseImage1> name=IndicaChromosome09:12300068..12302659 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:12300068..12302659 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGATCTTGCTGACAATCAGTTAGTGTGCTGCAGTGGGAGGTACAATCATTTTGCAAAGCTGTTAAATGATCATGGGCTTAAAGTTTATGCAATGGACTGGATTGGACATGGTGGAAGTGATGGGGTGCATGGCTATGTTTCATCGCTTGATCATGCTGTTGGTGACCTGAAAGAATTTCTAGAGGATGTTGTACTGGAGGAAAACTATGGTTTGCCATGTTTCTTATTTGGCCACTCCACAGGTGGAGCTATTGTTTTGAAGGCAGTCCTGGATCCTTGTGTTGAAGTTCATGTTGAAGGTGTGATCTTGACATCTCCGGCTATTCATGTTCAACCATCTCATCCAATTATCAAAGTTGTTGCACCTATCTTCTCTGTGTTAGCTCCAAAATACCGAGTTGCTGCTTTGCACAGGAGAGGACCTCCTGTTTCCCGTGATCCTGAGGCTTTGAAGATCAAGTATGCAGATCCACTTGTGTATACTGGACCCATTAGAGTTAGAACTGGCAATGAAATTCTTCGGATATCATCATATTTGCAAAGAAACTTAAGCAGAGTAACTGTCCCTTTTTTAGTTCTGCATGGCACAGCTGACACAATAACTGACCCCGGAGCATCTCAACGACTATACCAATCATCAGCATCAGCACATAAATCTATAAAACTGTATGATGGATATTTACATGATCTTCTCTTTGAACCTGAAAGGGATGATATAGCAAATGACATCATCAATTGGTTAAGCTCAAGACTTGATGTTCTCCAGAGATGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVDLADNQLVCCSGRYNHFAKLLNDHGLKVYAMDWIGHGGSDGVHGYVSSLDHAVGDLKEFLEDVVLEENYGLPCFLFGHSTGGAIVLKAVLDPCVEVHVEGVILTSPAIHVQPSHPIIKVVAPIFSVLAPKYRVAALHRRGPPVSRDPEALKIKYADPLVYTGPIRVRTGNEILRISSYLQRNLSRVTVPFLVLHGTADTITDPGASQRLYQSSASAHKSIKLYDGYLHDLLFEPERDDIANDIINWLSSRLDVLQRW</aaseq>

Gene Sequence

<dnaseqindica>1..109#933..997#1083..1175#1292..1384#2173..2592#ATGGTGGATCTTGCTGACAATCAGTTAGTGTGCTGCAGTGGGAGGTACAATCATTTTGCAAAGCTGTTAAATGATCATGGGCTTAAAGTTTATGCAATGGACTGGATTGGTGAGTTACTATCATACTCTGTGCTAAAATCTTGATTAGTTTGATGTTCTCGTTGTTTAGTGATTCTTTAAGATTCTCGAACCAGGTTGTACTAACTACACAGTTTACCTGAGATTGGAGATTTGAAAAATCTTAAAACTAGAGTGAAAGGCCATTGACAGACTCATTAGATTAGTTTGTTTTGTTTTGTTGCCACAGTGAACTTCAGAGTTGTGGGATGCCTACTGCTGTACCAGGCACATATGTGATTTGTTCAGTATCTAAGCCTCTTCAATTTCACAGTAACTTTGTAAAATATTTTGTATCAAATAAAATTTTTGCTTGGCATTAGACTTGTACTGTAACAGGAAAATTTTTAGTGCCTGAATGTGCCCTTTTCCTGATCACCAGGAGAATGTCAATTTGGTGCTACAGACAAAAATACTCAAACCCATCATACTTTTTTTTTCTTCGATGAGGTTGGAGGTTGAATATGAAATTCAGTGGTTGCAGATTAATATTTACCAAATATTCATAGTGGTCCCATCTGTCAATGTTGAAGGGAAGGTTAATATTAACTATCACCAACTAAGATAATTTATAGGAGTACCTACATCTGTCATGTTGTACAAGTATTGTTATAAAACAAACTACCTTTTATAGTAACTCCTAACCAATATGGTATATCTTGCCTTATGGTGAACTGATCCTTTTTATCGATGGGCTGCTTCTAACTAGGAAGTGACAAAACTAGAGACCAGTTACAACTTTGTTTTTTTTTTTCGCTGTATATATTTCGGGTCTTCTGATCTTCACTATGCTGTACGTTGTCTCGTCTCTGAAGGACATGGTGGAAGTGATGGGGTGCATGGCTATGTTTCATCGCTTGATCATGCTGTTGGTGACCTGGTACTTTTCTTGATACACAATAGCTGCACAGAAATATATATCTAGCAGGATTTCCATGAACCTCTAAATGCTCTTTTCCATGCAGAAAGAATTTCTAGAGGATGTTGTACTGGAGGAAAACTATGGTTTGCCATGTTTCTTATTTGGCCACTCCACAGGTGGAGCTATTGTTTTGAAGGTACACACTGGTACAACAAAAGCTGTTAGACTGGATTGTTTGATTGCCTTTGTGATAGGGAGTACACATAACTGAAAATACCAGCTTCACTTCCTTTTTGTGCGAGTGAACCAAAGGCAGTCCTGGATCCTTGTGTTGAAGTTCATGTTGAAGGTGTGATCTTGACATCTCCGGCTATTCATGTTCAACCATCTCATCCAATTATCAAAGTAAGCACATTACTTTATATATGCCTTTGTTTTCTATACCCTGCATTCCTTTTGCACTTGGGATGCTATCTTCACGTGTTCAATGTGAAATTACACTATTAACCTTGGTATCTAACAACAGAAGAAGGATTTATTGTTGATATTCCAAAGATCTGTACCATTTCTATATGTTGATATACATTCATATCCTGCTAGAGCTCATTTTGTTTGGCGTTTGTCATTGTATTATTTATTTTCTTGTTTAGTTATGTCAATTTCTCATATAACTGTTTGTAAGGTGGTTTACTAGTGTTGATTTGAGTAGATTGAAACATTCCTTTCGTCACAGAAGAAATTCTTGACTTGGATATTCCAATTAAAAAAATGTAAACAGAGAGGTATGAAGTAATGTTCTCAAGCTTATTTTCATAATGTCAGTGGAATCTTCTGATTTTACTGGAGTATGAGTTCACATGAGATATCAACATTCTATTATCTTATGTTAATGGCTGTACAACTTCTATACAGTTTAACCTGCGGTATATCTAAAGCCCATGTTAATTTCTACAAACAGAGTATCTCACTTCTGTTATGAAAAAATTACCGTCTGACTCCCATCATATTATTAAGTAATTTCAACGTGTTTTCTGTCATATGAAGATTTGCCTGTGGTTTGTTGACTTTTGATCTGGAGTGTAATTTGTGTGATTATTAACAACTGGGTGACTGCAACAAGGAATCAAGGATATAGTTGGAATGAGTTTTTATTTACAGATTTTATTTTTTTTGTTTGCGTTTATCTATACCAGGTTGTTGCACCTATCTTCTCTGTGTTAGCTCCAAAATACCGAGTTGCTGCTTTGCACAGGAGAGGACCTCCTGTTTCCCGTGATCCTGAGGCTTTGAAGATCAAGTATGCAGATCCACTTGTGTATACTGGACCCATTAGAGTTAGAACTGGCAATGAAATTCTTCGGATATCATCATATTTGCAAAGAAACTTAAGCAGAGTAACTGTCCCTTTTTTAGTTCTGCATGGCACAGCTGACACAATAACTGACCCCGGAGCATCTCAACGACTATACCAATCATCAGCATCAGCACATAAATCTATAAAACTGTATGATGGATATTTACATGATCTTCTCTTTGAACCTGAAAGGGATGATATAGCAAATGACATCATCAATTGGTTAAGCTCAAGACTTGATGTTCTCCAGAGATGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029809