BGIOSGA029922

From RiceWiki
Revision as of 09:34, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA029922| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA029922, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA029922

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029922, complete gene.

LocusTag

OSJNBA0042H24.8-2

Ensembl Transcript ID

BGIOSGA029922-TA

Ensembl Protein ID

BGIOSGA029922-PA

Length

4006

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:9724757..9728762

Sequence Coding Region

9728385..9728762,9728167..9728293),complement(9727295..9727346,9726882..9727209),complement(9726407..9726486
,9726285..9726332),complement(9725529..9725675,9725167..9725239),complement(9724982..9725054
,9724757..9724833

Genome Context

<gbrowseImage1> name=IndicaChromosome09:9724757..9728762 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:9724757..9728762 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGGAAGAAGCGCAAGTCCGCCTCCTCCGACAAGCAGCCGAAGCAGCAGCAGCAGCGGCTCCCACTCGGCGCCGACGCCGACGCGGTCGCCGACGCGGCGAAGCGCCGCCGCTCGGGGGCGTCGAAGAAGCACCAGGCGGAGGAGGAGGCCTCCATACCTTCCTCCCTCAGCGCCAAGATCCTCCGCGAGGCGCTCACCCAGCAGCAGGAGGAGTCCCTCGCCGACCAGCGCCCCGCCGCCGCCGCCACCGCCGCTCCGTCCCCATCCTTCTCCTTCCCCGTGCCCAAGAAAGATGGCGAGGAGGACGAAGACGATGATGACGTCGACGAGTTCGATGGCTTCGACGCGCAGAGCGAGTACGACGGAGGCGTGCCGGAGATTGATGAGGAGGACGAGAAGGCTCTCGCTGCATTCATGTCAAAGGACACCTCTTCGAAGCGCTCACTTGGTGATATCATTCTCGAGAAGATCAGGGAAAAGGATGCAGAAATCTCAACAGAAGGACGGACTCCTGTGAAGTTGGACTCCAGTATTATTGAACTTTATAAAGGGGTTGGGGAGTTCTTGAGCCGATACACAAGTGGGAAAATTCCTAAAGGATTCAAGCGTATCCCATCATTGGAATGCTGGCCAGATGTTCTGCAGCTGACTGAGCCTGAAAATTGGTCTCCTAACGCAGTATATCAAGCAACACGGCTCTTCTCTTCAAACATGAACGCGAAGAACGCTGTGCGATTCTATGAAGCTATTTTACTTCCTCGTGTCCGTAATGACATAAGGAAGAACAAGAGGCTTCATTTTGCACTATACCAGTCTCTGAAAAAATGCCTGTACAAGCCTGCAGCGTTTTTCAAGGGAATATTGTTGCCGCTGTGTCAGGAAAGGAATTGCACTCTGCGGGAAGCAGTAATTATTGGTAGTATCATCTCGAAAGTCTCCATTCCTCCTCTCCATGCCAGTGCAGCTTTAATGAAACTAGCAGAGATGGAGTACTGTGGCACAACTAGCTACTTTATTAAGCTATTTCTTGATAAGAAATATGCTTTGCCATATCGTGTTGTTGATGCGGTTTTTGCTCATTTCATGCGGTTTATTGATGAGGAGAGGGTCATGCCTGTTATATGGCATCAATCACTCCTAGCCTTTGTGGAAAGATACAAGAATGAATTAGAGAAAAAGGACAAGGAGAAACTTGCACGCTTGTTGGATCACCAGAAGCACTATTTGGTTACTCCAGAAATTCGTAGGGAACTTCGGATGAGCTGCAACAGGGGTGAAAAGGACACAATCATGTCGATATGCTCCCCAGTTTCTGTGATCACGAAACCAATTGAAGAAGACAGGTGGAATGTTCCGGAAGTACCTATGGAGGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAGKKRKSASSDKQPKQQQQRLPLGADADAVADAAKRRRSGASKKHQAEEEASIPSSLSAKILREALTQQQEESLADQRPAAAATAAPSPSFSFPVPKKDGEEDEDDDDVDEFDGFDAQSEYDGGVPEIDEEDEKALAAFMSKDTSSKRSLGDIILEKIREKDAEISTEGRTPVKLDSSIIELYKGVGEFLSRYTSGKIPKGFKRIPSLECWPDVLQLTEPENWSPNAVYQATRLFSSNMNAKNAVRFYEAILLPRVRNDIRKNKRLHFALYQSLKKCLYKPAAFFKGILLPLCQERNCTLREAVIIGSIISKVSIPPLHASAALMKLAEMEYCGTTSYFIKLFLDKKYALPYRVVDAVFAHFMRFIDEERVMPVIWHQSLLAFVERYKNELEKKDKEKLARLLDHQKHYLVTPEIRRELRMSCNRGEKDTIMSICSPVSVITKPIEEDRWNVPEVPMEE</aaseq>

Gene Sequence

<dnaseqindica>1..378#470..596#1417..1468#1554..1881#2277..2356#2431..2478#3088..3234#3524..3596#3709..3781#3930..4006#ATGGCCGGGAAGAAGCGCAAGTCCGCCTCCTCCGACAAGCAGCCGAAGCAGCAGCAGCAGCGGCTCCCACTCGGCGCCGACGCCGACGCGGTCGCCGACGCGGCGAAGCGCCGCCGCTCGGGGGCGTCGAAGAAGCACCAGGCGGAGGAGGAGGCCTCCATACCTTCCTCCCTCAGCGCCAAGATCCTCCGCGAGGCGCTCACCCAGCAGCAGGAGGAGTCCCTCGCCGACCAGCGCCCCGCCGCCGCCGCCACCGCCGCTCCGTCCCCATCCTTCTCCTTCCCCGTGCCCAAGAAAGATGGCGAGGAGGACGAAGACGATGATGACGTCGACGAGTTCGATGGCTTCGACGCGCAGAGCGAGTACGACGGAGGCGTGGTAAAAAAAAAAAACACAATACGCGTCTCCTTTTGTTTGCTTCCGTGTGATTGATGTGTATTTTTCTGATAAATTTTCTGTTGGTTTGTAGCCGGAGATTGATGAGGAGGACGAGAAGGCTCTCGCTGCATTCATGTCAAAGGACACCTCTTCGAAGCGCTCACTTGGTGATATCATTCTCGAGAAGATCAGGGAAAAGGATGCAGAAATCTCAACAGGTGATCGCCGATATGCGATAGCTGTTTCTTCTCTGATTCTTGGGACGCTAGTTGTTTAAAAATCACATTAACTGCGGCGTAAAAGCTATATCGATTAGCGGAAGCTCTTGCTGCTTTGTTAGAATAAGTAAAATCATGTTGAAGCTTTAAATCTTTATTATTTGAGGTTATAGTGCAAATTGATGCCTTAGGAGTAATAAAACTCACATTCTGAACTATTAATGCGCCATCTAGTATTTTAACTCAGTCAGCTAAAATGTCTACAGCGAATAGCGGGTACTATTGTGGCGGATATCCTACACAGGGTCCTAATGATTGTAGAAGTTTATCCATCATGTGAATATAAACAGTTGTCAATAATACTCCTGCGATATCATACATATCAAGTCTGAAATCTTAAGTAACCACAGTAATAGTTCTTCACTATAGCCGATTTGTTAGAATAAATAAAATAAATTTTAGTCTTTAATTTTTTATGATGCGAGGTCTATGTTCAAATATATTTCTTAGGAGTACTAAAACAGAAACTTCATTTCTTAAACTAAAACATGACCCATAAAATTCACAATTTGAGCTAGTACTTGAACATAGTTCCGCTATAAACTGCTATTAAACACTGGTTCACAATAATGTCCATCCAGCCTAGTGCGGATACATCCTGCTAATTAAACTCTGGTCTACAATAATGTCCATTCAACCAGTGACTAACTGGTTTGGGGCTTTTTCAGTGCACATTTGAACTAAATGCATGGATGGTTTCTTAAATAAAAGGACTAAATCAATTACATGGGATTCCTGTTATTTGTATATGTTTTTGCAGAAGGACGGACTCCTGTGAAGTTGGACTCCAGTATTATTGAACTTTATAAAGGGTACATGCAACTGCCTCCTTCTCGTTTCATTTAAAAAGATTCAGTTTTGCATGTTTTTATGGATTGTTTAATTTTGCAAAAACAGGGTTGGGGAGTTCTTGAGCCGATACACAAGTGGGAAAATTCCTAAAGGATTCAAGCGTATCCCATCATTGGAATGCTGGCCAGATGTTCTGCAGCTGACTGAGCCTGAAAATTGGTCTCCTAACGCAGTATATCAAGCAACACGGCTCTTCTCTTCAAACATGAACGCGAAGAACGCTGTGCGATTCTATGAAGCTATTTTACTTCCTCGTGTCCGTAATGACATAAGGAAGAACAAGAGGCTTCATTTTGCACTATACCAGTCTCTGAAAAAATGCCTGTACAAGCCTGCAGCGTTTTTCAAGGGAATATTGTTGCCGCTGTGTCAGGTATTTCTATTTAAAGTAGCAAACAACATTTAACTTGCCATTTAGCATAATCATTTCTACTATAATGTGCAATCTCCCTATCTTCTGTTTGGTATCTCATATTTACTTTTTCTTCTGTATAATGCATGGTTGGTATTTTTTACCCGGTTAATTTATGTTTTTGAAATCACAGTAGACATACAAATTGTCTATAATAGTCTGTTAGTTATAAGCCATAGAACAACAAAAATTTACTTTTTGGTATATCTTATCTACTGGGGTCTGCTTTTCTGTTCATTTTTCGCTTTGCCTTATGGGCGGTGGTTTTATTTTAGGTCTGTTTCATACTCACAGTTACACATGTCCAACTGTATTACATCTTTCTGATTCTCAGTGAGCTTATATTATGACTGCAGGAAAGGAATTGCACTCTGCGGGAAGCAGTAATTATTGGTAGTATCATCTCGAAAGTCTCCATTCCTCCTCTCCATGCCAGGTCAGTTGAATTTTGTGGTTCAGGTCTTAAGATGCTTGCTGAGTTGCTTATCTCTACTTGATATTTTGATGCAGTGCAGCTTTAATGAAACTAGCAGAGATGGAGTACTGTGGCACAACTAGGTAAAGTTTGGCACCTTTAAACTGAGTCTATTTGTCCAATCTAGTTGTAATTTCAGAGTGTTGGGTCAAACAATTTCTTTTCACATAAATCTCTATGGTCCAGTAAACGATACTAGTTGAATGGCAATATACATTTTTGTATGCAAAAATGATTGATATGCTATAGGTTGATTATAGCTGATTAGTTATCACATGATGTGCAAAATCATGATACTGTTACATTCATTTCATTTGCATCTGTCTTTATGCCAATAGATGCTATGTTTTCTTTTATTGAAGGTTGCCGTAAACTATCAAGCATCAATTCCTGATTGATTTCTGCTACATGTGTCATACTCTGGTAAAACTAGTCCACCATGTGTGCCCTGTGGTGGGCAACACTTCCTCCTGGTCTTAGAATTGGTTGGTTTGTGTAGTTTTAATGAATAGTGTCTTGCTTAGCAGCATAAGTTTATGATGTTTACCTGCCAGATGTGTTGTACACATACGTCAGTGTTCTCTAGCACATTGTGGATTAATCATTTTATTTATAATTGTGATTGTCCATTTGTTCTTTTGGTACATTCTTGGTTATTTGCAACATGGTGTAACCTATCACCTCTCTTGCAGCTACTTTATTAAGCTATTTCTTGATAAGAAATATGCTTTGCCATATCGTGTTGTTGATGCGGTTTTTGCTCATTTCATGCGGTTTATTGATGAGGAGAGGGTCATGCCTGTTATATGGCATCAATCACTCCTAGCCTTTGTGGAAAGGTAAGTGATAGATCACAGATACACCAACCAAATTTATTCAGAGCTTTTTTAAAATATAAGCATTGTCATTACTCATTTGATTATGCCATTCAGAAAATTTGTAGAGAGCACTATTTACCTTTTTTTTTTCATATTTCTTGGTTGCCCTATTTTGATTACTGATACATATATTCACCTTCTCTGCACTTATGGCCTGATGTTGCCATAAGTGACATGGTGTTTCTTTGTAGCCATCTTTCCTGACATTCTTGCTGGTGTATTCATGTGTTGCTAAATAATGTCATGACAGATACAAGAATGAATTAGAGAAAAAGGACAAGGAGAAACTTGCACGCTTGTTGGATCACCAGAAGCACTATTTGGTAGATACTTTTCATTTCATCGATCATATGCATGCATGATTCACTTAAGTGTTCTCTGCTCAATAAATGTGTCAACTGCCATGCCCTGAACCTTTGCTTGCTCTCTATACAGGTTACTCCAGAAATTCGTAGGGAACTTCGGATGAGCTGCAACAGGGGTGAAAAGGACACAATCATGTCGATATATATCCTTACAGCGCATGCAGATTCTTACCTTTTTTGCATTATAATCCATTGACGAAAGCTTACTACTAGTGCTAACAATGAGCCTTATTTGGAATTGCGTGTTCCTAACTTCATTACATGTGGTTGTGTCCTTAACACTGTTCTTACGCTCCCCAGTTTCTGTGATCACGAAACCAATTGAAGAAGACAGGTGGAATGTTCCGGAAGTACCTATGGAGGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029922

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA029922&oldid=29126"