BGIOSGA030045

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Revision as of 09:35, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030045| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030045, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA030045

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030045, complete gene.

LocusTag

OSJNBA0044K01.30

Ensembl Transcript ID

BGIOSGA030045-TA

Ensembl Protein ID

BGIOSGA030045-PA

Length

3725

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6637119..6640843

Sequence Coding Region

6640786..6640843,6640604..6640717),complement(6640239..6640464,6639937..6640138),complement(6639530..6639610
,6639200..6639346),complement(6638724..6638829,6637119..6637993

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6637119..6640843 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6637119..6640843 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTCTAGCCATGAGCCCTCGGGACTGCTAAACAGTGATGACATACCTTCCGAAGGCATAAGTCACTGTAAAATATTTCAGAGTTGTGTGCGTCTGCTCAAAGGCGGATGCAGCTTGAGGTCAGGGGGCTCGCTGCCTTCTTCCTCCATGGAGATCCAGTGGGTAGGAGGATCAGAAGTAGCGCCACCGTCTGTTAGCACTGGTGGGAATACAGAGCTAGTAGAACAAGGAAATGATAGGGTGCCTGCAATGACTAAGATTGTGGTAGAACCAAACGCTGAGCTACAGTCACCATTCGTGGTAAAACACCATCTATTACTCAAGAGACCCGATCCTAGCATACTAGACGAATTGTACAGCTTGACTATGGCTTTTACCGATTCAGAGTCAAAACAGACCGATTGGGTATCAATCAAGCACCCATCGTTCCCCATCAGATTAAAGCTTGAAGATATCCAGGAAACAGTAAAACCTGGAGGATTGATGGATACCGATTGCCTCAACTTAGCTGTGAGAAATATGGCAACAGAGGATGCTGAAAATTTTAAGAACACTGAGTGTTTGGGTTGGAGGCATTACGTTAAATCAGATTGGACGCAACTGGTCGCTAGTCCCACGAATCTGAGGATTGCATATTCGTGTGAGTCTACTCTGTATGATGCTTCAGGATCACATCTGGTATTCATCCCCGTATTACATTGCGACCACTGGACACTATATGCTTTCAACATGTGTGATAAGAAGCTCAGTATTCTGGACTCTCTACCAGATGCCAGTGAAGGTGGTCAGGATCGTCTGAAGCGTCATGAGGAAATCAGAAAAATTGAAACGATGGACATGCGGAAGAGCTTTCTAGCATGCATACTCTCCAGCAAAAATGATGATGCCACCATGCCTACTAATGTTTCTGAGTTGATCAAAACGCTCCCAGGGGAGGCCATGATGACTCCTGAATTGGTACAGGCTACGAGGCAGGGCAATACAAATGCATTTAGGGAACTTAGATGTCCTGCACGAAGGGAGGGTTCATATGGAGGCCATACCTCAATAAGTATTAATAGAGCTGCTTGCTGTTCTTGTGTTCTTTTTGAGAGCACATCATCCCGCTGTTCTTGTTTCCGTTTAGATTGCAAATCCTCATGCCGTTCTGATGAGCAAGAGAATCAGATTATGCGGAGTCCATTGCGCTTAGATGCAACATCAACAGTTACTAGTGATAGAGGTCCACCTGAGCCATACTCTATCCGGGGTGTGACGGTTGACGGGGACGGGGTGCTCCACATTGCTGCAAGCTTTTGCCATTTCGAGCTTGCCAAATCCATCTTGGAAGGGCAGGAGGACAAAGCCCTCATAGTTATGCTACTACAAGAGAACAAGAGAGGAGATAGGCCCCTGCACTGCGCAGCTGCCACGGAGAGTAAAGAAATGGTTCAACTCATTGTGGAAAGAGCGAAATGTATCACAGAGCCGTCCAATTTTACTACCAGTCTGCTGCGTGCGAGAAATTTGGAGGGCCAAACATGCTTGCATAAGGCCATTCTACTCGGTCACACGGAGATCGTCAAGTATTTGGTTTCGCAAGATGAAGGATTGGCGCAAATAGTGGACAATGAGGATATTTCTCCCCTCTATTTGGCCATCGCATTACGAAGAGGTGACATTGTCCAAGAACTGACAATAAAAGCATCGTGTGGGCCTGCAGGTGCCGTGTCGTATTGTGGGCCCGCAGGGAAAACAGTTTTACATGCTGCTGTTCTCTTCAGTGAAGGTACAGACGCAATCTCAAGTTTTGTTGTCAAGTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSSSHEPSGLLNSDDIPSEGISHCKIFQSCVRLLKGGCSLRSGGSLPSSSMEIQWVGGSEVAPPSVSTGGNTELVEQGNDRVPAMTKIVVEPNAELQSPFVVKHHLLLKRPDPSILDELYSLTMAFTDSESKQTDWVSIKHPSFPIRLKLEDIQETVKPGGLMDTDCLNLAVRNMATEDAENFKNTECLGWRHYVKSDWTQLVASPTNLRIAYSCESTLYDASGSHLVFIPVLHCDHWTLYAFNMCDKKLSILDSLPDASEGGQDRLKRHEEIRKIETMDMRKSFLACILSSKNDDATMPTNVSELIKTLPGEAMMTPELVQATRQGNTNAFRELRCPARREGSYGGHTSISINRAACCSCVLFESTSSRCSCFRLDCKSSCRSDEQENQIMRSPLRLDATSTVTSDRGPPEPYSIRGVTVDGDGVLHIAASFCHFELAKSILEGQEDKALIVMLLQENKRGDRPLHCAAATESKEMVQLIVERAKCITEPSNFTTSLLRARNLEGQTCLHKAILLGHTEIVKYLVSQDEGLAQIVDNEDISPLYLAIALRRGDIVQELTIKASCGPAGAVSYCGPAGKTVLHAAVLFSEGTDAISSFVVKF</aaseq>

Gene Sequence

<dnaseqindica>1..58#127..240#380..605#706..907#1234..1314#1498..1644#2015..2120#2851..3725#ATGTCTTCTAGCCATGAGCCCTCGGGACTGCTAAACAGTGATGACATACCTTCCGAAGGTATTAGAGTTCCCTTCATAGAGTAAGCTAGTGTTGCGTTTTTTTTTCTTTTTTGTGTTTTATTGCAGGCATAAGTCACTGTAAAATATTTCAGAGTTGTGTGCGTCTGCTCAAAGGCGGATGCAGCTTGAGGTCAGGGGGCTCGCTGCCTTCTTCCTCCATGGAGATCCAGTGGGTAGGAGGTGCTGAAGACCCCCAGACCTCAGGCTGGATCTGCCACCTCGTCTGCGAGGTGTAATTATTTGTTTCTTAGTTGCATAACTTGGGTTCATTGTGAGTTACAACTTTTTAAATTTTGCATTCTCCATGTGACATGTACAGGATCAGAAGTAGCGCCACCGTCTGTTAGCACTGGTGGGAATACAGAGCTAGTAGAACAAGGAAATGATAGGGTGCCTGCAATGACTAAGATTGTGGTAGAACCAAACGCTGAGCTACAGTCACCATTCGTGGTAAAACACCATCTATTACTCAAGAGACCCGATCCTAGCATACTAGACGAATTGTACAGCTTGACTATGGCTTTTACCGATTCAGAGTCAAAACAGTAAGTTTGACTTTGTCTTTGAAACATCGACCTGTTAGGCTGTGATGTTTATTTACTGCATCCATGACCTGCCTTATTGATAATTGCGATAACGATACAGGACCGATTGGGTATCAATCAAGCACCCATCGTTCCCCATCAGATTAAAGCTTGAAGATATCCAGGAAACAGTAAAACCTGGAGGATTGATGGATACCGATTGCCTCAACTTAGCTGTGAGAAATATGGCAACAGAGGATGCTGAAAATTTTAAGAACACTGAGTGTTTGGGTTGGAGGCATTACGTTAAATCAGATTGGACGGTAAGTTGGTTGCGCAAGAGTTGGGGGTGATATACAGTCCTTTTTTTTTTCACTTATGCTTATACTCATCAGCCAAAATTTAAATTTTAAACCTTAAATTTAAAGTTGATTTTGGGTTTTTTTCATCGTAATTTATTTTTCAGTCTTTACTTTTATATTGCTAAAATATGCATAAAAAGGTTTATTTACAACTTATTTTCTATTTGCAAATATGCCATTTTGTTTATGCTTAAAATCAGCCAAACAATGGGGCCGATAATTCCGAGTCAAATCTTCTAGTAGTGTCACAAATGACACCTATTTTTTGTTTGTTTTTTCCTCCACAGCAACTGGTCGCTAGTCCCACGAATCTGAGGATTGCATATTCGTGTGAGTCTACTCTGTATGATGCTTCAGGATCACATCTGGTATGATCGATCTTAATTATTATATCCTAATTTTGTAGGGCTGAAAAATACTTGCTAATATCTTGTCACCAAATCGGTCCATTGATGAAATATGACTTCTTACATACGACTTAAATTACAGAATGCATGCATTCTGTTAATTAAGTAAAATTTGAACATTATATTGTTTTTTAATATGTGTAGGTATTCATCCCCGTATTACATTGCGACCACTGGACACTATATGCTTTCAACATGTGTGATAAGAAGCTCAGTATTCTGGACTCTCTACCAGATGCCAGTGAAGGTGGTCAGGATCGTCTGAAGCGTCATGAGGAAATCAGAAAAATTGTATGTGGTGCTCTTAACAAAACCATGGATGTTGCGTTCTGTTTTTTCTCTTGGGAGTACGAGTTTCCAAAAGTGCCTAGGCAACAGAATAGGTGTGACCTGTAACACAATGTTTCTTACTAGAATCATCTTGTTGTCTGGTATATGTTTTACTAAGTGTCAAGTGATTAACTCATTTCTTCCTATGATTTATTTATTTAGTTATGACGGTGGGTTCTTTGTATTCAATTTTATGCGATTATGGGATGGCCATCGACTGATTCGCTGGTTTTCAACTGTAAGTAATAATTCCTAGAGATTTAATTTTGATTGGAATGCATATTCAGAATACTATTATCATACATTTAATTTGTACACATTGTCTTGTTAGGAAACGATGGACATGCGGAAGAGCTTTCTAGCATGCATACTCTCCAGCAAAAATGATGATGCCACCATGCCTACTAATGTTTCTGAGTTGATCAAAACGCTCCCAGGTTAGACATAGAGAGGTTTTCTATGTGTTTGTGACAGCACAAATAATCTATCACAAATGAAATTAATTGAAATGAAGAAAGAAAAACATTAGAAACATTAATGTATAATTACGAACATTAATCACATTCAAGAAAGAAAAATAATAAAAACATTGTATAATTCCAAACATTTGGAGCCCCTAAATACCGGAAAGGAAAAAAATTATATACATGAGTACGTGAAATCAATAAAAAAATAAAAAAGAACAAAACTTTATGAGGACATGCATCTTTGAGTCGTAAATAAAGGTTTAGTGACATTTAACAACTCACGCTTGAATCTAATGGCATGAGAGCAATTAGGCGAAATTGACTGCAACTTGACAATTAGATCATGCACCAACGTAATGTACAATTGTTTTATTAGGTCATTCCCAACATAATGACTTGAATGGTGTCCATAACACTAAATAAACTAACACTTAGAATGAAAAACGATGTAGCAAGTGAATAAATGAGGAAAGAGAAGGAAATCATGTCTTGCATGAGACATGGCGTCTACATAACATCCAAGACATCATGTGAGATAAATAGCATTAAATTAAAGTATGGAATAGTGGTGTTTGCATTGGAAGAGTAGTGTATAATACTAGTTTCTTAATGATGTGAAATTTATGAAAACTATATGTAGTGTCTTGGGTTAGGAATGGCCTTATACAACGACTAATGCCATTAATATTTCTAATTTTAGGGGAGGCCATGATGACTCCTGAATTGGTACAGGCTACGAGGCAGGGCAATACAAATGCATTTAGGGAACTTAGATGTCCTGCACGAAGGGAGGGTTCATATGGAGGCCATACCTCAATAAGTATTAATAGAGCTGCTTGCTGTTCTTGTGTTCTTTTTGAGAGCACATCATCCCGCTGTTCTTGTTTCCGTTTAGATTGCAAATCCTCATGCCGTTCTGATGAGCAAGAGAATCAGATTATGCGGAGTCCATTGCGCTTAGATGCAACATCAACAGTTACTAGTGATAGAGGTCCACCTGAGCCATACTCTATCCGGGGTGTGACGGTTGACGGGGACGGGGTGCTCCACATTGCTGCAAGCTTTTGCCATTTCGAGCTTGCCAAATCCATCTTGGAAGGGCAGGAGGACAAAGCCCTCATAGTTATGCTACTACAAGAGAACAAGAGAGGAGATAGGCCCCTGCACTGCGCAGCTGCCACGGAGAGTAAAGAAATGGTTCAACTCATTGTGGAAAGAGCGAAATGTATCACAGAGCCGTCCAATTTTACTACCAGTCTGCTGCGTGCGAGAAATTTGGAGGGCCAAACATGCTTGCATAAGGCCATTCTACTCGGTCACACGGAGATCGTCAAGTATTTGGTTTCGCAAGATGAAGGATTGGCGCAAATAGTGGACAATGAGGATATTTCTCCCCTCTATTTGGCCATCGCATTACGAAGAGGTGACATTGTCCAAGAACTGACAATAAAAGCATCGTGTGGGCCTGCAGGTGCCGTGTCGTATTGTGGGCCCGCAGGGAAAACAGTTTTACATGCTGCTGTTCTCTTCAGTGAAGGTACAGACGCAATCTCAAGTTTTGTTGTCAAGTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030045