BGIOSGA030052

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Revision as of 09:36, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030052| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030052, complete gene.| tag = B1043F1...")
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Gene Name

BGIOSGA030052

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030052, complete gene.

LocusTag

B1043F11.38

Ensembl Transcript ID

BGIOSGA030052-TA

Ensembl Protein ID

BGIOSGA030052-PA

Length

3531

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6491093..6494623

Sequence Coding Region

6491093..6494623

Genome Context

<gbrowseImage1> name=IndicaChromosome09:6491093..6494623 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:6491093..6494623 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCTCGCCGCCGTTCATGGCGGCCGCGGCGTTCCTTACGCTTGTGGTGGTGCTGTTTCGGGCGCCGGCTCCCGCCATTGCCGTCGGCGAGGAGGCGGCGGCGCTGCTGGCCTTCAGGCGCGCGTCCGTGGCGGACGACCCGGACGGCGCGCTGGCGAGCTGGGTGCTGGGCGCCGGCGGCGCCAACTCCACCGCGCCGTGCTCGTGGGACGGCGTGTCGTGCGCGCCGCCGCCCGACGGCCGCGTCGCCGCCGTCGACCTCAGCGGCATGAGCCTCGCCGGCGAGCTGCGGCTCGACGCGCTCCTCGCGCTCCCGGCGCTGCAGCGCCTCAATCTCCGCGGCAATGCCTTCTACGGCAACCTCTCGCACGCCGCGCCGTCGCCGCCGTGCGCGCTCGTGGAGGTGGACATCTCGTCGAACGCCTTGAACGGGACGCTGCCGCCGTCGTTCCTGGCGCCGTGCGGCGTGCTGCGGTCCGTGAACCTGTCGAGGAACGGCCTCGCCGGCGGCGGGTTCCCGTTCGCGCCGTCGCTGCGGTCGCTGGACCTGTCGCGCAACCGCCTCGCCGACGCCGGCCTGCTCAACTACTCCTTCGCCGGCTGCCACGGCGTCGGCTACCTCAACCTCTCCGCCAACCTCTTCGCCGGGCGGCTGCCGGAGCTCGCCGCGTGCAGCGCGGTGACCACGCTCGACGTGTCGTGGAACCACATGTCCGGCGGGCTCCCGCCGGGGCTCGTGGCCACCGCGCCGGCCAACCTGACGTACCTCAACATCGCCGGCAACAACTTCACCGGCGATGTCTCCGGCTACGACTTCGGCGGGTGCGCCAACCTCACGGTGCTCGACTGGTCCTACAATGGCCTAAGTAGCACCAGGTTGCCACCGGGGCTCATCAACTGCCGCCGCCTCGAGACGCTGGAGATGTCCGGGAACAAGCTCCTCTCTGGCGCGCTGCCGACATTCTTGGTCGGCTTCTCGTCGCTGAGGCGGCTGGCATTGGCCGGCAACGAGTTCACCGGAGCGATTCCGGTGGAGCTGGGGCAATTGTGTGGCAGAATTGTTGAGCTGGACTTATCCAGCAACCGGCTGGTTGGTGCCTTGCCGGCGAGCTTTGCAAAGTGCAAGTCTCTTGAGGTGCTCGACCTCGGTGGCAACCAGCTCGCCGGCGACTTTGTGGCCAGTGTCGTCAGCACCATCGCCTCGCTGCGTGAGCTGCGGCTGTCGTTCAACAACATCACCGGTGTAAACCCGCTGCCGGTGCTCGCAGCGGGGTGTCCATTGCTGGAGGTGATTGATCTTGGGTCCAATGAGCTCGATGGGGAGATAATGCCGGATCTTTGCTCGTCGTTGCCATCGTTGCGGAAGCTGCTCCTTCCGAACAATTACCTCAATGGCACCGTGCCGCCTTCGCTTGGCGATTGCGCCAATCTGGAGTCCATTGATCTCAGCTTCAATCTGCTGGTTGGCAAGATCCCAACAGAGATAATCAGGCTTCCAAAGATCGTTGATCTGGTCATGTGGGCGAATGGCCTATCCGGTGAGATACCGGATGTTCTCTGCTCCAATGGCACCACATTGGAGACATTGGTGATAAGCTACAACAACTTCACCGGAAGCATTCCAAGATCCATTACAAAGTGTGTGAATCTCATCTGGGTGTCGCTTTCCGGTAACCGTCTTACCGGGAGCGTGCCCGGTGGATTCGGCAAGCTTCAGAAGCTTGCCATTCTGCAACTCAACAAGAATCTGCTATCTGGACATGTTCCAGCAGAGCTTGGCAGCTGCAACAACCTCATCTGGCTTGATCTCAACAGCAACAGCTTCACCGGGACGATACCGCCGCAGTTGGCAGGCCAGGCAGGGCTTGTTCCGGGAGGTATTGTGTCAGGAAAGCAGTTTGCATTTCTCCGGAATGAGGCTGGCAACATATGCCCTGGTGCCGGTGTTCTCTTTGAGTTCTTTGGCATCAGGCCAGAGCGGTTGGCTGAGTTCCCTGCAGTGCATCTGTGCCCATCCACAAGGATTTACACGGGCACGACGGTTTATACATTCACCAACAATGGGAGTATGATCTTCCTTGATCTCTCATACAATGGCCTCACCGGCACAATCCCAGGAAGTCTTGGAAACATGATGTATCTTCAGGTCCTTAACTTGGGGCACAATGAGCTCAATGGCACAATACCGGATGCATTTCAGAACCTCAAGTCGATCGGCGCACTCGATCTCTCAAACAATCAGCTCAGTGGTGGCATTCCTCCAGGCCTTGGTGGTTTGAATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTGACTGGTCCAATCCCTTCATCCGGGCAGCTCACCACGTTCCCGCCATCCCGGTACGACAACAACAATGGTCTCTGTGGCATCCCTTTGCCTCCTTGTGGCCACAATCCCCCATGGGGAGGTAGGCCACGCGGTTCGCCTGATGGGAAGAGGAAGGTGATTGGGGCGAGCATTCTTGTCGGGGTGGCACTCTCCGTGCTCATACTGCTCCTGCTGCTGGTCACTCTCTGCAAGCTCAGGATGAACCAGAAGACTGAAGAGGTGAGAACTGGGTATGTTGAGAGCCTTCCAACATCTGGAACATCGAGTTGGAAGCTGTCGGGTGTCCGTGAGCCGCTAAGCATCAATGTGGCGACATTCGAGAAGCCGCTGAGGAAGCTCACATTTGCACACCTCCTTGAGGCCACCAATGGATTCAGTGCTGAGACTCTCATTGGATCAGGGGGATTTGGTGAGGTATACAAGGCCAAGCTCAAGGATGGCAGTGTTGTGGCCATCAAGAAACTGATTCACTTCACTGGCCAAGGTGACCGGGAATTCACTGCAGAGATGGAGACCATTGGAAAGATCAAGCACCGCAACCTTGTCCCATTGCTTGGATATTGCAAGATTGGTGATGAGAGGCTCCTTGTCTACGAGTACATGAAACACGGCAGCCTGGATGTTGTGCTCCATGACAAGGCCAAGGCTAGTGTGAAGCTTGACTGGTCAGCAAGAAAGAAAATTGCAATTGGTTCAGCCAGGGGCCTCGCATTCCTCCACCACAGCTGCATCCCACACATCATACACCGGGACATGAAGTCGAGCAATGTGCTTCTTGACAACAACCTCGATGCCCGTGTATCGGATTTCGGGATGGCAAGGCTGATGAATGCGCTTGATACGCATCTGAGTGTGAGCACACTTGCAGGTACACCTGGGTATGTGCCACCTGAGTACTACCAAAGCTTCAGGTGCACGACCAAAGGCGACGTCTACAGCTATGGTGTTGTGCTCTTGGAGCTCCTCTCAGGTAAGAAGCCAATTGATCCGACTGAGTTTGGAGACAACAACCTTGTTGGTTGGGTGAAGCAGATGGTTAAAGAGAACAGAAGCAGTGAGATCTTTGATCCTACATTGACTGATAGAAAATCAGGGGAAGCAGAGCTCTATCAGTACCTGAAGATGCATGCGAGTGCTTGGATGATCGACCCAACCGAAGGCCAACCATGA</cdnaseq>

Protein Sequence

<aaseq>MAASPPFMAAAAFLTLVVVLFRAPAPAIAVGEEAAALLAFRRASVADDPDGALASWVLGAGGANSTAPCSWDGVSCAPPPDGRVAAVDLSGMSLAGELRLDALLALPALQRLNLRGNAFYGNLSHAAPSPPCALVEVDISSNALNGTLPPSFLAPCGVLRSVNLSRNGLAGGGFPFAPSLRSLDLSRNRLADAGLLNYSFAGCHGVGYLNLSANLFAGRLPELAACSAVTTLDVSWNHMSGGLPPGLVATAPANLTYLNIAGNNFTGDVSGYDFGGCANLTVLDWSYNGLSSTRLPPGLINCRRLETLEMSGNKLLSGALPTFLVGFSSLRRLALAGNEFTGAIPVELGQLCGRIVELDLSSNRLVGALPASFAKCKSLEVLDLGGNQLAGDFVASVVSTIASLRELRLSFNNITGVNPLPVLAAGCPLLEVIDLGSNELDGEIMPDLCSSLPSLRKLLLPNNYLNGTVPPSLGDCANLESIDLSFNLLVGKIPTEIIRLPKIVDLVMWANGLSGEIPDVLCSNGTTLETLVISYNNFTGSIPRSITKCVNLIWVSLSGNRLTGSVPGGFGKLQKLAILQLNKNLLSGHVPAELGSCNNLIWLDLNSNSFTGTIPPQLAGQAGLVPGGIVSGKQFAFLRNEAGNICPGAGVLFEFFGIRPERLAEFPAVHLCPSTRIYTGTTVYTFTNNGSMIFLDLSYNGLTGTIPGSLGNMMYLQVLNLGHNELNGTIPDAFQNLKSIGALDLSNNQLSGGIPPGLGGLNFLADFDVSNNNLTGPIPSSGQLTTFPPSRYDNNNGLCGIPLPPCGHNPPWGGRPRGSPDGKRKVIGASILVGVALSVLILLLLLVTLCKLRMNQKTEEVRTGYVESLPTSGTSSWKLSGVREPLSINVATFEKPLRKLTFAHLLEATNGFSAETLIGSGGFGEVYKAKLKDGSVVAIKKLIHFTGQGDREFTAEMETIGKIKHRNLVPLLGYCKIGDERLLVYEYMKHGSLDVVLHDKAKASVKLDWSARKKIAIGSARGLAFLHHSCIPHIIHRDMKSSNVLLDNNLDARVSDFGMARLMNALDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLSGKKPIDPTEFGDNNLVGWVKQMVKENRSSEIFDPTLTDRKSGEAELYQYLKMHASAWMIDPTEGQP</aaseq>

Gene Sequence

<dnaseqindica>1..3531#ATGGCCGCCTCGCCGCCGTTCATGGCGGCCGCGGCGTTCCTTACGCTTGTGGTGGTGCTGTTTCGGGCGCCGGCTCCCGCCATTGCCGTCGGCGAGGAGGCGGCGGCGCTGCTGGCCTTCAGGCGCGCGTCCGTGGCGGACGACCCGGACGGCGCGCTGGCGAGCTGGGTGCTGGGCGCCGGCGGCGCCAACTCCACCGCGCCGTGCTCGTGGGACGGCGTGTCGTGCGCGCCGCCGCCCGACGGCCGCGTCGCCGCCGTCGACCTCAGCGGCATGAGCCTCGCCGGCGAGCTGCGGCTCGACGCGCTCCTCGCGCTCCCGGCGCTGCAGCGCCTCAATCTCCGCGGCAATGCCTTCTACGGCAACCTCTCGCACGCCGCGCCGTCGCCGCCGTGCGCGCTCGTGGAGGTGGACATCTCGTCGAACGCCTTGAACGGGACGCTGCCGCCGTCGTTCCTGGCGCCGTGCGGCGTGCTGCGGTCCGTGAACCTGTCGAGGAACGGCCTCGCCGGCGGCGGGTTCCCGTTCGCGCCGTCGCTGCGGTCGCTGGACCTGTCGCGCAACCGCCTCGCCGACGCCGGCCTGCTCAACTACTCCTTCGCCGGCTGCCACGGCGTCGGCTACCTCAACCTCTCCGCCAACCTCTTCGCCGGGCGGCTGCCGGAGCTCGCCGCGTGCAGCGCGGTGACCACGCTCGACGTGTCGTGGAACCACATGTCCGGCGGGCTCCCGCCGGGGCTCGTGGCCACCGCGCCGGCCAACCTGACGTACCTCAACATCGCCGGCAACAACTTCACCGGCGATGTCTCCGGCTACGACTTCGGCGGGTGCGCCAACCTCACGGTGCTCGACTGGTCCTACAATGGCCTAAGTAGCACCAGGTTGCCACCGGGGCTCATCAACTGCCGCCGCCTCGAGACGCTGGAGATGTCCGGGAACAAGCTCCTCTCTGGCGCGCTGCCGACATTCTTGGTCGGCTTCTCGTCGCTGAGGCGGCTGGCATTGGCCGGCAACGAGTTCACCGGAGCGATTCCGGTGGAGCTGGGGCAATTGTGTGGCAGAATTGTTGAGCTGGACTTATCCAGCAACCGGCTGGTTGGTGCCTTGCCGGCGAGCTTTGCAAAGTGCAAGTCTCTTGAGGTGCTCGACCTCGGTGGCAACCAGCTCGCCGGCGACTTTGTGGCCAGTGTCGTCAGCACCATCGCCTCGCTGCGTGAGCTGCGGCTGTCGTTCAACAACATCACCGGTGTAAACCCGCTGCCGGTGCTCGCAGCGGGGTGTCCATTGCTGGAGGTGATTGATCTTGGGTCCAATGAGCTCGATGGGGAGATAATGCCGGATCTTTGCTCGTCGTTGCCATCGTTGCGGAAGCTGCTCCTTCCGAACAATTACCTCAATGGCACCGTGCCGCCTTCGCTTGGCGATTGCGCCAATCTGGAGTCCATTGATCTCAGCTTCAATCTGCTGGTTGGCAAGATCCCAACAGAGATAATCAGGCTTCCAAAGATCGTTGATCTGGTCATGTGGGCGAATGGCCTATCCGGTGAGATACCGGATGTTCTCTGCTCCAATGGCACCACATTGGAGACATTGGTGATAAGCTACAACAACTTCACCGGAAGCATTCCAAGATCCATTACAAAGTGTGTGAATCTCATCTGGGTGTCGCTTTCCGGTAACCGTCTTACCGGGAGCGTGCCCGGTGGATTCGGCAAGCTTCAGAAGCTTGCCATTCTGCAACTCAACAAGAATCTGCTATCTGGACATGTTCCAGCAGAGCTTGGCAGCTGCAACAACCTCATCTGGCTTGATCTCAACAGCAACAGCTTCACCGGGACGATACCGCCGCAGTTGGCAGGCCAGGCAGGGCTTGTTCCGGGAGGTATTGTGTCAGGAAAGCAGTTTGCATTTCTCCGGAATGAGGCTGGCAACATATGCCCTGGTGCCGGTGTTCTCTTTGAGTTCTTTGGCATCAGGCCAGAGCGGTTGGCTGAGTTCCCTGCAGTGCATCTGTGCCCATCCACAAGGATTTACACGGGCACGACGGTTTATACATTCACCAACAATGGGAGTATGATCTTCCTTGATCTCTCATACAATGGCCTCACCGGCACAATCCCAGGAAGTCTTGGAAACATGATGTATCTTCAGGTCCTTAACTTGGGGCACAATGAGCTCAATGGCACAATACCGGATGCATTTCAGAACCTCAAGTCGATCGGCGCACTCGATCTCTCAAACAATCAGCTCAGTGGTGGCATTCCTCCAGGCCTTGGTGGTTTGAATTTCCTTGCAGATTTTGATGTCTCCAACAACAACCTGACTGGTCCAATCCCTTCATCCGGGCAGCTCACCACGTTCCCGCCATCCCGGTACGACAACAACAATGGTCTCTGTGGCATCCCTTTGCCTCCTTGTGGCCACAATCCCCCATGGGGAGGTAGGCCACGCGGTTCGCCTGATGGGAAGAGGAAGGTGATTGGGGCGAGCATTCTTGTCGGGGTGGCACTCTCCGTGCTCATACTGCTCCTGCTGCTGGTCACTCTCTGCAAGCTCAGGATGAACCAGAAGACTGAAGAGGTGAGAACTGGGTATGTTGAGAGCCTTCCAACATCTGGAACATCGAGTTGGAAGCTGTCGGGTGTCCGTGAGCCGCTAAGCATCAATGTGGCGACATTCGAGAAGCCGCTGAGGAAGCTCACATTTGCACACCTCCTTGAGGCCACCAATGGATTCAGTGCTGAGACTCTCATTGGATCAGGGGGATTTGGTGAGGTATACAAGGCCAAGCTCAAGGATGGCAGTGTTGTGGCCATCAAGAAACTGATTCACTTCACTGGCCAAGGTGACCGGGAATTCACTGCAGAGATGGAGACCATTGGAAAGATCAAGCACCGCAACCTTGTCCCATTGCTTGGATATTGCAAGATTGGTGATGAGAGGCTCCTTGTCTACGAGTACATGAAACACGGCAGCCTGGATGTTGTGCTCCATGACAAGGCCAAGGCTAGTGTGAAGCTTGACTGGTCAGCAAGAAAGAAAATTGCAATTGGTTCAGCCAGGGGCCTCGCATTCCTCCACCACAGCTGCATCCCACACATCATACACCGGGACATGAAGTCGAGCAATGTGCTTCTTGACAACAACCTCGATGCCCGTGTATCGGATTTCGGGATGGCAAGGCTGATGAATGCGCTTGATACGCATCTGAGTGTGAGCACACTTGCAGGTACACCTGGGTATGTGCCACCTGAGTACTACCAAAGCTTCAGGTGCACGACCAAAGGCGACGTCTACAGCTATGGTGTTGTGCTCTTGGAGCTCCTCTCAGGTAAGAAGCCAATTGATCCGACTGAGTTTGGAGACAACAACCTTGTTGGTTGGGTGAAGCAGATGGTTAAAGAGAACAGAAGCAGTGAGATCTTTGATCCTACATTGACTGATAGAAAATCAGGGGAAGCAGAGCTCTATCAGTACCTGAAGATGCATGCGAGTGCTTGGATGATCGACCCAACCGAAGGCCAACCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030052