BGIOSGA030146

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Revision as of 09:37, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030146| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030146, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA030146

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030146, complete gene.

LocusTag

OSJNBB0066C12.38-1

Ensembl Transcript ID

BGIOSGA030146-TA

Ensembl Protein ID

BGIOSGA030146-PA

Length

4885

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:3929769..3934653

Sequence Coding Region

3934507..3934653,3934152..3934376),complement(3933869..3934045,3933665..3933739),complement(3933472..3933516
,3933173..3933337),complement(3932755..3932833,3932579..3932658),complement(3932119..3932187
,3929769..3929852

Genome Context

<gbrowseImage1> name=IndicaChromosome09:3929769..3934653 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:3929769..3934653 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCCCTCCTCGCCGCCTCTTCCTCTCTCCCCGCGGCCGCCTTCTCGCCGCCGTCGTCCCTCTCTTCGACCTCCTCGTCGCCGCACGCCCTACGGTCGGCCGTCGCCGGAGCCGCCCGCGCGGTGCGCTGCTCCGCCGCCAAGGATTCGATCCTGTACGCGCTGGAGCACGACGAGATGTTTAACTCGGCGGAGGTGATCCAGTGGGAGAGCGGCAAGTCCATCAACTCCATCGCCGCCGCGCAGGGCATCCGCATCCGCCGCCGCTGCCGCCCACGCTACCCCTCCGAGGGCTCCGGCGCCGACAAAGCCGTCCCCCGCAACATGCTCGAGCAGATCATCTGGGACAAAGAGGTCGAGGTGTCCCAGAGGAAGGCGAAGAAGCCGCTGCAGAAGGTGATCGAGTCGAGCCAGCACGCGCCACCGGCCAGGGACTTCGTCGGCGCGCTAACGGCGGCCTACAGCCGCAACGTCGCGCCGGCGCTGATCGCCGAGGTGAAGAAGGCGTCGCCGAGCAGAGGCGTGCTCCGGGAGGACTTCAATCCGGTTGAGATCGCGCAATCCTATGAGAAGAACGGCGCGGCTTGCCTCAGTATCCTGACCGACGAAAAACACTTTCAGGGTAGCTTTGAGAATCTCGAGACCGTTCGCAATTCCGGAGTAAAGTGCCCTCTTCTTTGCAAGGAGTTTGTGATAGATATCTGGCAAATCTATTACGCTCGGTCAAAGGGTGCGGATGCAATTCTGTTGATTGCTGCCGTGTTACCTGATCTCGACATCAAGTACATGCTTCGCATCTGCAAGAACCTCGGAATGACAGCTCTCATAGAGGTTCATGATGAGAGGGAGCTGGATCGTGTGCTCAAAATAGATGGCGTTCAGCTTATCGGCATCAATAACCGAAGTTTAGAGACGTTTAAGGTTGATACTTCAAACACAAAGACCCTGTTGGAGAAACGTGGTGACCTCATAAGGGATAAAGGGATTCTGGTTGTTGGTGAATCTGGTCTTTTCACGCCTGATGATGTTGCATACGTGCAGAATGCTGGTGTTTCTGCAATTTTGGTAGGAGAGTCCCTGGTGAAACAGGAAAATCCCGGGCAAGCCATTGCTGGACTATATGGAAAGGATCTTTTGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MESLLAASSSLPAAAFSPPSSLSSTSSSPHALRSAVAGAARAVRCSAAKDSILYALEHDEMFNSAEVIQWESGKSINSIAAAQGIRIRRRCRPRYPSEGSGADKAVPRNMLEQIIWDKEVEVSQRKAKKPLQKVIESSQHAPPARDFVGALTAAYSRNVAPALIAEVKKASPSRGVLREDFNPVEIAQSYEKNGAACLSILTDEKHFQGSFENLETVRNSGVKCPLLCKEFVIDIWQIYYARSKGADAILLIAAVLPDLDIKYMLRICKNLGMTALIEVHDERELDRVLKIDGVQLIGINNRSLETFKVDTSNTKTLLEKRGDLIRDKGILVVGESGLFTPDDVAYVQNAGVSAILVGESLVKQENPGQAIAGLYGKDLLH</aaseq>

Gene Sequence

<dnaseqindica>1..147#278..502#609..785#915..989#1138..1182#1317..1481#1821..1899#1996..2075#2467..2535#4802..4885#ATGGAGTCCCTCCTCGCCGCCTCTTCCTCTCTCCCCGCGGCCGCCTTCTCGCCGCCGTCGTCCCTCTCTTCGACCTCCTCGTCGCCGCACGCCCTACGGTCGGCCGTCGCCGGAGCCGCCCGCGCGGTGCGCTGCTCCGCCGCCAAGGTGCTCCTCCTCTCGAGCCACCCGTTTCTTGATTCTGCAGCTCTGGCAAATCGCGTTCACCGCCGTGCCCTGTTTTTCCTATTCGATCGATCGTTTCTGCGGGTTTTGATGGCATCTGGTTTTGGTGCAGGATTCGATCCTGTACGCGCTGGAGCACGACGAGATGTTTAACTCGGCGGAGGTGATCCAGTGGGAGAGCGGCAAGTCCATCAACTCCATCGCCGCCGCGCAGGGCATCCGCATCCGCCGCCGCTGCCGCCCACGCTACCCCTCCGAGGGCTCCGGCGCCGACAAAGCCGTCCCCCGCAACATGCTCGAGCAGATCATCTGGGACAAAGAGGTCGAGGTGTCCCAGGTAAACTCGTCTGCGCCGCGCGTAAACTGTTTGAATAAATTCGCACACAAGAATAACCATTTGTTACTGATTGGCATGCATTTTCGGTTACTCTGTTCTTGTGCAGAGGAAGGCGAAGAAGCCGCTGCAGAAGGTGATCGAGTCGAGCCAGCACGCGCCACCGGCCAGGGACTTCGTCGGCGCGCTAACGGCGGCCTACAGCCGCAACGTCGCGCCGGCGCTGATCGCCGAGGTGAAGAAGGCGTCGCCGAGCAGAGGCGTGCTCCGGGAGGACTTCAATCCGGTGAGTTTCAGAGAGTTTTGCTTGCATCTCTCTTTACGAAAATTCATGTCTGAAGGTTGATTGCCTGGTTTATAATTTAATTGTCTGAATACTGTTTCATGTGTTGCTAATCTTTTGAACTGATAACAGGTTGAGATCGCGCAATCCTATGAGAAGAACGGCGCGGCTTGCCTCAGTATCCTGACCGACGAAAAACACTTTCAGGTTGGCTGTTCTTCTGTTCTTTTTTCTAAGAAAGAAGGTCTCGCCTTCTGGTAGCTTTCGACTTCGTAGTTCTCAAATTCTTATCCTTACAATTATTAATGTTTTTTTTTCGCATATATCTGACTTTTCAAACTCTTTGATTCTTCAGGGTAGCTTTGAGAATCTCGAGACCGTTCGCAATTCCGGAGTAAAGGTACGCGCTAGTATTCAAAATGGGCTTCTTCTTTTTTAACTTTTTCGGAAGAATATTCTTCAGCTGCAGTTGACAGTTGAAACATGTGCATTTGTCATGCGAATGTTGAAGTTTGATTCTGTCAATGCCTGCAGTGCCCTCTTCTTTGCAAGGAGTTTGTGATAGATATCTGGCAAATCTATTACGCTCGGTCAAAGGGTGCGGATGCAATTCTGTTGATTGCTGCCGTGTTACCTGATCTCGACATCAAGTACATGCTTCGCATCTGCAAGAACCTCGGAATGACAGCTCTCATAGAGGTGCTTTACAACTTCCATGTTCTCTCACTGTTGCTTTACAATAACAGTTTGCATACAATTCCATTTTGACTGTCCATATTCTGTTTGACAAATCATTTAACTTATTACCAAATTTGACAAGTCAGTTTTGGTTGCTGCTTTTCTATCAGTGATTAATCGAATGATAATGGATCGGTTGAAACATTTTCTTGTAGGGATCAATTCCTTATCTAATATGTGATTCGTCATAAGCATGCTCTGTTTTATTTTTATATTTTTAGATGAGCTCATTTTTAGTTCATCGTATCCTATTCAATTGTAAGTTTTCTTAATGTGTACTAAACGTAACTCATATTCTAGGTTCATGATGAGAGGGAGCTGGATCGTGTGCTCAAAATAGATGGCGTTCAGCTTATCGGCATCAATAACCGAAGTTTAGGTATGGTCATTATCATTTCTTGCAAATGTCTCCAATCATTTGAGACGTTAAGAATCATAGTTGACATTGATGTATACTGGAATTTCGTTATTATAGAGACGTTTAAGGTTGATACTTCAAACACAAAGACCCTGTTGGAGAAACGTGGTGACCTCATAAGGGATAAAGGGATTCTGGTACGTCCTCCGTACAGTTGTGTGATAATTCGTTTTGGAATCAGCAATTACGTTATCTTACTTTTATTCTTTTAGATGCGCTTGATGTTATGCTTTATTATTAACCATATTTCAGTGTACTTTCATCAATGATAATTTAAAAACCACTTGAAATATATCCGTTTATTTGCTTAAAATATATTTGGGAGCACGTAATTATTGTTATCTGATACACCATTGATTTCAGAATATCGCACAGTTCAGTTGTTCACGGAACAGATTCTTGTTTCAAACCTATTAGAAGTTCCTTTTTTCGGGGGTGCCTGTTAGATATTATTTTGTCTAATTTTTATAATATAAAGTGATTAGTTGACCTGTATATGTGGTGTTAATGGATTTTTTTTTATTTCAGGTTGTTGGTGAATCTGGTCTTTTCACGCCTGATGATGTTGCATACGTGCAGAATGCTGGTGTTTCTGCAGTAAGTTTACTGATTACCCGTTTTCAGCTAAGTTGGTCATACATGTGCTTCAAATTTCCAGCTGAAATATTGTACGGAACGTCTGAAATGGATTAAGAATATCTGTAATTGGACTTAATATTTATCCACGATATAACAAATAACACTAATTCTGGGAAATTTTAATAAGCTAGTTTCAGAACAATTTTACTATATTCTAATTTAGATGTAACTAGGAAGATAGCCCACGCATTCGTGCGGGCATGCTTTGTACGCTAAGTTTGAGACACTTATAGAAGCAAACATCTGCCACGATTTCTCTATAATTTTTTTTCATCGGCCTTAATTGCTTTTATAATTCTCTAACCTATTAGCTTTATAGTATATCATATTTGTGTTATGCCACGATTTCTTCATAATTTTTTTTTCATTGGCATTAATTGCTTTTATAATTCTCCAAACCCATTAGCTTTATATTATATCATATTTAAATAATATTTATAAGTAATTATTTGTAATATTCTTCATCATTTGAAAAGATGGTAGAATTATTTTCTTCAGAAAACATGTCAACAAAAGTAAAAGTAAGGTGTTTTGTCCAGATACGTAGCTAGAGTTTGTTTTTTTCTGGGACAGAGTAGTACGTACATGTGAATAACAAAATTGAAAAGCCAAAAGTGAATTAGGCCATGCTTAGATTCTATGCCAAAACTTTACACCATGTTCACATCAGATGTTTGAACACCTGAATGAAATAATAAATATCGGCCAAAAAAATAACTAATTGCACATATTGCAACTAATTTGCGAGACGAATCTTTTAAGCCTAATTGCTCCAAGATTTGACAATGCGGTGCTACAGTAAACATTTGCTAATGACGGAATAATTAGACTTATAAATTCGTTAGTATTCGTCTCGCGGTTTACTAACGAATTTTGTAATTAGTTTTTTTTATTAGTGCCCAAACACCACATGCGACACCCTATATAATACCCGATGTGACACGCCAAAACTTTACACCCCTGGATCTAAACACCCCCTTAATCATCAGCCATGGTGGGACATACGAGCAATAGCAGGATGACTACGGTGACGCCCTAGGGAAGCTTCCCTCCGTCCGGCCGTTAGCCGTGGTTCCGGTGGCGCTAGGTTATTTTAATCTCAATTAAGTTGGACGGCTAAAAATATTGGACCCACTGAATTAAGTAAAAATTGAGGGATGGATTTTATTAGCGTCACGTGGTAGCTTGAGAGTATTTTATGGATTGGCACGTGGCAGTGTGAGAGCGTTTTAAGAAAGTTCAAATGGACTTTTAGTATTCAACAATTAATATAAAACAAAATTATTAAATTATCTAATATTATTAAATTATTATAAATTATGGTCCTTGATGCAATAATTCAATAACATAATCCGGGTTATCGAATTTTGTTATAGTTCCTCCATTTCACAATGTAAAACTTTCCAGCATTACCATATTATATAGATATTAATGAATCTAAACATATATGTGTCTAGATTCATTAGCATCTATATGAATATGGACAATACTAGAAAATTTTACATTGTGAAACAGAGGGAGTATTTATTAAAAGAAAGCGGGCTAATCTAATGGTCTAACATATTGCGTGTTTTTATAGTATAGAAAATCTTATTTTAAAAAGATGGTCTAATTTTTTCTACTGATGTGCATACATATAAATTTTAAGTGCGTTATAGTTCTTTTACATACGTAAGCATGTTTTTATTTTTTTAGTAGGTTTTTTTTATAGTTTTTCTTCTCGTACTTACGTATGATTCTTGATTTTTTTAAATGAACAGTTCCATAGCTTTTTCCCTCATAAGTAGGCATGCTAGTTTTACCCATATGCACGGGGTACTAACAGCAAGTAAATAGATCTAATCTACCGGTGTAAAATTATGGGCCCACTCATTTAAATGAAAATCAACGGTGAGATTATAAAATGCCATGTGGCGACTTAGGAGCGTTCGTAGGGACGCCACGTGACGGCTTAGGAGCGTTTATAGAAAGATTAATGGACTTTTAGTATATAATAGATTGTAGTCAAAATTGCAACCTTTTTCCTCCTCCCAATTTTTTTTCTGGTACTTTGTTGTCGTTTGAATTATGGTGTTTTGGAAAAATTCATTTTCGTTTAGAGACAACAAAAGAAACACTAGACCGATGGATTGTGTTTCCTCCTCTCAGATATTAAATTTTGAATTATGAATCTTTTGTTACTTTATTCTGAAATAAATCCCTGACTTTTTTTTTGCACACATAGATTTTGGTAGGAGAGTCCCTGGTGAAACAGGAAAATCCCGGGCAAGCCATTGCTGGACTATATGGAAAGGATCTTTTGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030146

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA030146&oldid=29350"