BGIOSGA030202

From RiceWiki
Revision as of 09:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030202| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030202, complete gene.| tag = OJ1352_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA030202

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030202, complete gene.

LocusTag

OJ1352_A10.23

Ensembl Transcript ID

BGIOSGA030202-TA

Ensembl Protein ID

BGIOSGA030202-PA

Length

2559

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:1809551..1812109

Sequence Coding Region

1811947..1812109,1811672..1811826),complement(1811379..1811564,1809551..1810090

Genome Context

<gbrowseImage1> name=IndicaChromosome09:1809551..1812109 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:1809551..1812109 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGACTGACGAGACAACCGCGGCGGCGCCGGCCACCACCGCGCTCTCCGGCCATGGGCGCACCGTGTGCGTCACCGGCGCCGGCGGGTTCATCGCGTCGTGGCTCGTCAAGCGCCTCCTCGAGAAGGGCTACACCGTGCGTGGCACCGTCCGGAACCCTATGGACCCGAAGAACGACCACCTGAGAGCCCTGGACGGCGCCGGCGAGCGCCTCGTCCTCCTCCGCGCCGACCTCCTCGAACCCGACAGCCTCGTCGCCGCCTTCACCGGCTGCGAGGGCGTCTTCCACGCTGCCTCCCCCGTCACCGATGATCCTGAGAAGATGATAGAGCCGGCGATCAGGGGGACGAGATACGTGATAACGGCGGCGGCCGACACCGGCATCAAGCGTGTGGTGTTCACGTCCTCCATCGGCACTGTCTACATGAACCCCTACAGGGACCCCAACAAGCCCGTCGACGACACCTGCTGGAGTGACCTCGAATACTGCAAGAGGACAGAGAACTGGTACTGCTACGCGAAGACGGTGGCGGAGCAGGGTGCGTGGGAGGTGGCGCGGCGGCGTGGGGTGGACCTGGTGGTAGTGAACCCGGTGCTGGTGCTGGGACCGCTGCTGCAGGCGACGGTGAACGCGAGCACGGAGCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTGAACGCAGCGCAGGCGTACGTCCACGTCCGCGACGTCGCCGAGGCGCACGTCCGCGTGTACGAGTGCGGCGGCGCGCGGGGCCGGTACATCTGCGCCGAGAGCACCCTGCACCGCGGCGACCTCTGCCGCGCCCTCGCCAAGCTTTTCCCGGAGTACCCCGTCCCGACCAGGTGCAAGGACGAGGCGGCGCCGCCGGTGAAGGGGTACCTCTTCTCCAACCAGCGCCTCCGTGACCTCGGCATGGACTTCGTCCCCGTCCGCCAGTGCCTCTACGAAACCGTGCGAAGCCTCCAGGACAAGGGCTTGCTGCCGGTGCTGCCGCCCACCGCCGACGACCACCACCACCCTTCCTCGTGA</cdnaseq>

Protein Sequence

<aaseq>MPTDETTAAAPATTALSGHGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPMDPKNDHLRALDGAGERLVLLRADLLEPDSLVAAFTGCEGVFHAASPVTDDPEKMIEPAIRGTRYVITAAADTGIKRVVFTSSIGTVYMNPYRDPNKPVDDTCWSDLEYCKRTENWYCYAKTVAEQGAWEVARRRGVDLVVVNPVLVLGPLLQATVNASTEHVMKYLTGSAKTYVNAAQAYVHVRDVAEAHVRVYECGGARGRYICAESTLHRGDLCRALAKLFPEYPVPTRCKDEAAPPVKGYLFSNQRLRDLGMDFVPVRQCLYETVRSLQDKGLLPVLPPTADDHHHPSS</aaseq>

Gene Sequence

<dnaseqindica>1..163#284..438#546..731#2020..2559#ATGCCGACTGACGAGACAACCGCGGCGGCGCCGGCCACCACCGCGCTCTCCGGCCATGGGCGCACCGTGTGCGTCACCGGCGCCGGCGGGTTCATCGCGTCGTGGCTCGTCAAGCGCCTCCTCGAGAAGGGCTACACCGTGCGTGGCACCGTCCGGAACCCTAGTACGCACTGCAATACATACTCTTCTTGATCGATCTTCTTTAATTGCTGAGTGTATAATTAATTTGATATATATAGCTAGTTTTAGTACTAACTCCATTAATTGCTGACGATATTGGCAGTGGACCCGAAGAACGACCACCTGAGAGCCCTGGACGGCGCCGGCGAGCGCCTCGTCCTCCTCCGCGCCGACCTCCTCGAACCCGACAGCCTCGTCGCCGCCTTCACCGGCTGCGAGGGCGTCTTCCACGCTGCCTCCCCCGTCACCGATGATCCTGTATGTAAACTACATGCATGTACTTCAATGGCAATTAACGGTCTCGATCGAGCAAGCAGTATAATTAACTAGTAACTAACAAATCGGTTTGATCTGATCAAATTCAGGAGAAGATGATAGAGCCGGCGATCAGGGGGACGAGATACGTGATAACGGCGGCGGCCGACACCGGCATCAAGCGTGTGGTGTTCACGTCCTCCATCGGCACTGTCTACATGAACCCCTACAGGGACCCCAACAAGCCCGTCGACGACACCTGCTGGAGTGACCTCGAATACTGCAAGAGGACAGAGGTATGTCGTGTCATGTCATGTGTGTACCTAGTAGCTGGCTTAATTATCTTTCCTCCGATGCATAGTTAATTAACATGCATGCAAATTAATTAGCTTTTATTTTAAGTGCAGTTATAAATTTCTGTATTCAACTTTTGACCCTCCGTCTTATTTATAAAATTTATAAAGTTGATTTTAGAAAAAAACAATACATAAAGTACTATTCATATTTTATCATGTAATAAAAATAAAAATACTAATCATATAAAAATTTTAAATAAGACGGACGGTCAAACTTTAAACTCACAAACCCATAACTGAGTTTAAATTAAGACGGAGGGAATATATATATACGCCTTCAATAACAAGCTAATAATTAAAGATCATCAACTTGTTATATAGTAAGTAATTAGTTTTCATCTGAAAAGAATAATTAAACGAGACTGGGAAGATTCTAGGTTATATAACTTTACGGCTTCAAATCTTTGAAACTACGACTTATATCAACTTATGTATACTAATATATGATGATTACTGAATTCATGCTCATGGTTTGTCACTGTCTGCTTAATTTCGTCAAAGCTTTTAACGCATGTCAAGTTTTACCAAACGTGGCTAAAAAGAGGTGACGTTGATTTCTCATCTTCCATGGTCATCATCGGTGTTTCGTAGTCAAGTTGACAAAGACCAAGCCATTTCCTTTTGAGGAGCTCTTCTTAACTACCCCAAATACTTTTCCTCCACCTACTACCGCGCAAATATATCCAGAATTGTCATTTACTCCTCTGTAGTTGAGACCAAACAGAGCAGGATTATTTTCATAATTACTCATATTTACGAAAGATAGTTCATCTTACATGAAAATAATCTGCAATCTCTTTTTAATAATAATAATAACGTATATAGGTTCAGCCCTTTTTGAAACGCTTCTAACAACTACAACTTTTCTTACAATCGATCTATAGTTCTCCAATTAATAGTATAAACTTGTGCAGAACTTCTAAGAATAAATAGTTATATATGGAATATAGAAAATTTTATAACTATATATAGGAGTTGCTCTAAAACTAATATCAGATAAATTTATATGGGTTTCAAGTTTGTAACAATTAAAATTTAATTAATTATACGCTAATGATTTTCTTCTTTTTCCGTGCTCTAGCTAGCTTCGTCTTCATTTTCAGTATAATAAGGAACACGACCTTAATAATCAGTTGGAAACATGATCATATAATATATATATATATATATATATATATATATATATATATATATATAGACATGAATATAATACTTCATAATTTTGCAGAACTGGTACTGCTACGCGAAGACGGTGGCGGAGCAGGGTGCGTGGGAGGTGGCGCGGCGGCGTGGGGTGGACCTGGTGGTAGTGAACCCGGTGCTGGTGCTGGGACCGCTGCTGCAGGCGACGGTGAACGCGAGCACGGAGCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTGAACGCAGCGCAGGCGTACGTCCACGTCCGCGACGTCGCCGAGGCGCACGTCCGCGTGTACGAGTGCGGCGGCGCGCGGGGCCGGTACATCTGCGCCGAGAGCACCCTGCACCGCGGCGACCTCTGCCGCGCCCTCGCCAAGCTTTTCCCGGAGTACCCCGTCCCGACCAGGTGCAAGGACGAGGCGGCGCCGCCGGTGAAGGGGTACCTCTTCTCCAACCAGCGCCTCCGTGACCTCGGCATGGACTTCGTCCCCGTCCGCCAGTGCCTCTACGAAACCGTGCGAAGCCTCCAGGACAAGGGCTTGCTGCCGGTGCTGCCGCCCACCGCCGACGACCACCACCACCCTTCCTCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030202