BGIOSGA030226

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Revision as of 09:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030226| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030226, complete gene.| tag = OJ1310_...")
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Gene Name

BGIOSGA030226

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030226, complete gene.

LocusTag

OJ1310_F05.15

Ensembl Transcript ID

BGIOSGA030226-TA

Ensembl Protein ID

BGIOSGA030226-PA

Length

4624

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:930297..934920

Sequence Coding Region

934641..934920,933579..933697),complement(932843..933499,932687..932764),complement(932517..932606
,932065..932202),complement(930965..931135,930637..930843),complement(930297..930545

Genome Context

<gbrowseImage1> name=IndicaChromosome09:930297..934920 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:930297..934920 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGCAGGCGCAAGCGCAGCAGGCGGCGAGCTCCGCGTCCGAGGGCGGGTCCCCGGCCTCCTCCGCCGCGGCCGCTGCGGCGGCGGCCGCCTCCTTCCCGGCGACCTCGCTCTACGTCGGGGATCTCGACGTCAGCGTGCAGGACGCGCAGCTCTTCGACGTCTTCGCGCAGGTCGGCGGCGTCGTCTCCGTGCGCGTCTGCAGGGACGTCAACACGCGGAGGTCGCTCGGCTACGCCTACGTCAACTACAGCAGCCCCGCCGATGCTGCACGAGCGTTGGAAATGCTCAACTTCACTCCTATCAATGGAAAACCTATCAGGATCATGTATTCTAACCGTGACCCCAGCTTGCGCAAGAGTGGCACAGCAAATATTTTTATCAAGAACCTTGATAAGTCGATAGACAACAAAGCTTTGTATGATACTTTCTGTGTGTTTGGAAACATTCTTTCATGTAAAGTTGCAACAGATGCTTCTGGAGAATCGAAGGGCTATGGCTTTGTTCAGTATGAGCGGGATGAGGCAGCTCAAGCTGCTATTGATAAACTCAATGGCATGCTTATGAATGACAAAAAGGTGTATGTTGGGCCTTTCATTCGTAAGCAGGAGAGGGATAATTCTCCAGGCCAGGTCAAGTTCAATAATGTCTATGTAAAGAACCTGTCTGAGAATACTACTGAAGATGACTTGAAGGAAATCTTTGGAAAATTTGGAACCATCACTAGCGCTGTTGTAATGCGTGAGGGAGATGGAAGATCCAAGTGTTTTGGATTTGTTAACTTTGAAAGTCCAGATGATGCTGCTCAGGCTGTCCAAGAGCTGAATGGCAAGAAGTTTGATGATAAGGAATGGTATGTTGGAAGGGCACAAAAGAAATCGGAAAGAGAGATGGAATTGAAAGAGAAATTTGAGAAGAACCTTCAAGAAGCAGCAGATAAGTATCAAAACACTAACCTGTACCTGAAGAACTTGGATGATAGTGTTGATGATGATAAGTTGAGGGAGCTTTTTGCTGAGTATGGCACTATTACTTCCTGCAAGGTGATGCGGGATTCAAATGGTGTCAGCAGAGGTTCTGGATTTGTTGCGTTTAAATCTGCTGAAGATGCTTCCCGAGCTCTTGCCGAAATGAACAGCAAGATGGTTGGCAGCAAACCGCTCTACGTTGCGCTTGCACAGCGCAAGGAAGACAGGAAAGCAAGGCTGCAGGCACAATTTTCACAACTGAGGCCTGTCCCACTTGCTCCTTCAGTTGGTCCTCGCATGCCCATGTTTCCACCTGGTGTTCCTGGAGTTGGACAGCAACTGTTCTATGGTCAGCCCCCTCCAGCGTTTATCAACACACAGCCTGGTTTCGGCTTCCAGCAGCCTCTTATGCCTGGGATGAGGCCAGGTGCAGGTCCAATGCCGAACTTTATCATGCCTATGGTTCAGCAAGGACAACAGCCGCAGCGTCCGGCTGGTAGGCGTGCTGGTGCTGGTGGAATGCAGCAACCCATGCCAATGGGTCAGCAACAGATGATGGCTAGGGGCGGCCGTGGCTATCGGTATCCTACAGGACGTGGCATGCCTGATCCTGCAATGCATGGTGTTGGGGGTGGTGTGATGCCATCTCCATATGAGATGGGAGGCATGCCCATGAGAGATGCTGCTGCGTCACAGCCTGTACCTATTGGAGCATTGGCTACTGCACTGGCCAACGCAGCCCCTGATCAGCAAAGAATGATGCTTGGTGAGAACTTGTATCCTCTTGTTGATCAGCTGGAGCATGAGCAGGCTGCGAAGGTGACTGGCATGCTGCTGGAGATGGACCAGACTGAGGTGCTGCACCTGCTCGAGTCTCCAGAGGCTCTCAAGGCCAAGGTTGCTGAAGCCATGGAGGTCCTTCGCACGGCCCAGCAGATCCAGACGAACGCGACGCCTGAACAGCAGCTTGCTTCTCTGTCGCTGAATGACGGCGTCGTTTCCTCCTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAAQAQAQQAASSASEGGSPASSAAAAAAAAASFPATSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALEMLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNSPGQVKFNNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINTQPGFGFQQPLMPGMRPGAGPMPNFIMPMVQQGQQPQRPAGRRAGAGGMQQPMPMGQQQMMARGGRGYRYPTGRGMPDPAMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALATALANAAPDQQRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTAQQIQTNATPEQQLASLSLNDGVVSS</aaseq>

Gene Sequence

<dnaseqindica>1..280#1224..1342#1422..2078#2157..2234#2315..2404#2719..2856#3786..3956#4078..4284#4376..4624#ATGGCGGCGGCGGCGGCGCAGGCGCAAGCGCAGCAGGCGGCGAGCTCCGCGTCCGAGGGCGGGTCCCCGGCCTCCTCCGCCGCGGCCGCTGCGGCGGCGGCCGCCTCCTTCCCGGCGACCTCGCTCTACGTCGGGGATCTCGACGTCAGCGTGCAGGACGCGCAGCTCTTCGACGTCTTCGCGCAGGTCGGCGGCGTCGTCTCCGTGCGCGTCTGCAGGGACGTCAACACGCGGAGGTCGCTCGGCTACGCCTACGTCAACTACAGCAGCCCCGCCGATGGTACCTCCCCGATCCGCCTCGCCCTGCTCGATTGCTGTTCTTTTCCCACGAATCTAGCATCTAGGTTTAGGTGGATTGCTTTTTTTTCCTTTTCCCAAGACGATTAGGGTTTGGTACTCTTTTTTTTTCTTTTCACACGTTTAGGGTTTGGTCTCGTCGGATTTTAGGGTTTGGTCTCGTCGGATTAGGTTTGCTACCGTCGGATTAGAATGCCATTAGATTGATGTCGCTGCGGCAGTGTTAAAGCATGCATATTTCTTTTAAAAAAGATAGGAAGGCTGCCCTTCTTTTTTCTGACGTGGTTAGGGTCCTGATCCTCAGCGAGCTATTCCATTGCAGAAATAACTATGGTTTAGCACAAATCATTGCCTTCTCCCCCCAATATAAATACATTTCAGTGGTTCTTATTTTCATATTTGTAATTCTACATCATGTTCGGTAATGTCCATTAATCTGTTATGTTGGAAGATAATGCAAATCATTTAAGATGGTACATAAACACCCCTATTGAGCATCACATTTCTGTCTAGATGGCAGGCACGATAAATTTTGATATGAGTCCTCCTTAAATTGAGTAAAGTTATTATTTTTATAACGTTTGTATTGGAGATTTTGGGCTTTTGCTTATTTTGGTGTAATATCTCCTGTTCTAGTAAATGCTCTCATCTGCAGAGATGCACGTGAATCTGTTATGTCACCTAAAATTTTAAAACATTTGGGATGCCATGACTAATATGCAATAATTTCTAAGTTGTGCTGCCTTTGGGAAACTTGCACATTTTAAAATTCTTTGCCTAACAACATATATTTATTTACTACTGGCTATGATAGTTGTCTATTTCCTTTTCTTACAGAATATCCACATGCATCTACAATGGTTTTATTTGTTGCTTGACTTTTGTATTAGTCCTTTCATACTAAATATGTTATATCTATCTTGCAGCTGCACGAGCGTTGGAAATGCTCAACTTCACTCCTATCAATGGAAAACCTATCAGGATCATGTATTCTAACCGTGACCCCAGCTTGCGCAAGAGTGGCACAGCAAATATTTTTATCAAGGTATCTGTGCCCACTCTTGAAAGCTATTTTTTCATCTTTTTTTTTTTGTAGTTTGACATCCTGACTTCTCTTTTTTCAGAACCTTGATAAGTCGATAGACAACAAAGCTTTGTATGATACTTTCTGTGTGTTTGGAAACATTCTTTCATGTAAAGTTGCAACAGATGCTTCTGGAGAATCGAAGGGCTATGGCTTTGTTCAGTATGAGCGGGATGAGGCAGCTCAAGCTGCTATTGATAAACTCAATGGCATGCTTATGAATGACAAAAAGGTGTATGTTGGGCCTTTCATTCGTAAGCAGGAGAGGGATAATTCTCCAGGCCAGGTCAAGTTCAATAATGTCTATGTAAAGAACCTGTCTGAGAATACTACTGAAGATGACTTGAAGGAAATCTTTGGAAAATTTGGAACCATCACTAGCGCTGTTGTAATGCGTGAGGGAGATGGAAGATCCAAGTGTTTTGGATTTGTTAACTTTGAAAGTCCAGATGATGCTGCTCAGGCTGTCCAAGAGCTGAATGGCAAGAAGTTTGATGATAAGGAATGGTATGTTGGAAGGGCACAAAAGAAATCGGAAAGAGAGATGGAATTGAAAGAGAAATTTGAGAAGAACCTTCAAGAAGCAGCAGATAAGTATCAAAACACTAACCTGTACCTGAAGAACTTGGATGATAGTGTTGATGATGATAAGTTGAGGGAGCTTTTTGCTGAGTATGGCACTATTACTTCCTGCAAGGTTTGTTTACTTGTCTGCCTATGCATGTGTTTCAATGCTTATCAATTTCTGGTGCTAATAATAGAAACTGTGCCATAGGTGATGCGGGATTCAAATGGTGTCAGCAGAGGTTCTGGATTTGTTGCGTTTAAATCTGCTGAAGATGCTTCCCGAGCTGTAAGCTGGATGTGTATGCATGATATTTAGGTTGCTATGTTTCACAGATAATAATGTCTTGCTTTAATGTCTCCCTACAGCTTGCCGAAATGAACAGCAAGATGGTTGGCAGCAAACCGCTCTACGTTGCGCTTGCACAGCGCAAGGAAGACAGGAAAGCAAGGCTGCAGGTAAGAAATGATCGATGACCTTGTTCTTTGTTTTTATGAGGACCATGAGGTTCCTCAATTGGCCAGTTTTGAGAGTAGCATTGTGTGTACCTTTTGCACGTCACAATGTGAGTGCGAGTGTTATTTATGCATAGAAGAGTGCGGTAGCTAATATTCTGTGATGTCTCGCATTTTGAATAGAATTCTGGCATACCAATAAACAAGCTGTCATTAGATTGAATTTTCTTGGCTCACATAACTTGCATGTTTTTCATTATAATGCTTATTATTACTTTCTGTAGTATGATGTTGGTGGCTATTCCTTACTTTTGCAGGCACAATTTTCACAACTGAGGCCTGTCCCACTTGCTCCTTCAGTTGGTCCTCGCATGCCCATGTTTCCACCTGGTGTTCCTGGAGTTGGACAGCAACTGTTCTATGGTCAGCCCCCTCCAGCGTTTATCAACACACAGGTAAATAAGGCTTAATTTTCTTATTGATGTGTTCTTTTGACATCTTCTCTTTCCATAATAATCCCCCTTTTTTTTGGTGTTGTGTGTTAGTGTGCACAATTTCTTTCTTTCATAAGTTTTAGTGGTATCTTCTTACTGCTTTCGCTTGTGACCATTTGCTTTGACTATTTGGCGGTTGCATAGTAATAAGTTCTTGCTGACAAATGCAAGATCATGATGTAACGTTTAATGCCACTGTTTAATTTCCAGTCCTATTTATAAAGATTATTCCTGTAAGAATATAGCAAACAATCATGTCCTAAAGGCTTTTATGATAATTATGAGGTGATCGAATGCTAGTGTTGTTTCCTTTGTGCATTTAGATTAAGTGGTTAAATGATATTGATTGAACTTAGACATATGTCTTACTGTTTTCTGATTATGTCTCATATATTGGTCTTAAGAAAATACTACATCCAACCTGAAAGTATAAAGCTTGCTTATATGTAGTAAGTGGCAAATAATTTTATCTAGCAAATTGATGTCTTCTTATTCTGTGTTGCATTTATGAATGTTATACTGGCGCTGAATTTTTAACTTTGCAACATTGATCATTTTCCTCATTTGGTTTTGCAACACAAGATGGTCATTAACACTACACTTCTTTTGGTTGATAAGACATACAACACTAAGTTGTGAGCATTCAGTTGTTTAATCATGCATCTAGAGCTCTATGTTGCTTGCTATTCCTGTTTGCCGAGGAGACACAAAACTGTAGTAATATATAACCCGTCCAAAATTTGACACTGTTAGATGGTCAAGTGCAATTTACATTTGTTTCATAGGAATAGTCCAATAGTTTTTTTTGTCTTGTTATGATGGACTGGGTGGATACTTAAGATTGTTTATATGATTTGCTGGCTTGACAATTTTACCTTTTTTTATTATAGCCTGGTTTCGGCTTCCAGCAGCCTCTTATGCCTGGGATGAGGCCAGGTGCAGGTCCAATGCCGAACTTTATCATGCCTATGGTTCAGCAAGGACAACAGCCGCAGCGTCCGGCTGGTAGGCGTGCTGGTGCTGGTGGAATGCAGCAACCCATGCCAATGGGTCAGCAACAGGTATGACATATTTGTGCGTGTATGCTGAACATATAATAATTTTCCGTAAGCATTCCTGTAGTGTTAATTTGACAATTCCCTTGTGTATCGAGTGCCTGCTGAAATATAGTTAATGCTGCAGATGATGGCTAGGGGCGGCCGTGGCTATCGGTATCCTACAGGACGTGGCATGCCTGATCCTGCAATGCATGGTGTTGGGGGTGGTGTGATGCCATCTCCATATGAGATGGGAGGCATGCCCATGAGAGATGCTGCTGCGTCACAGCCTGTACCTATTGGAGCATTGGCTACTGCACTGGCCAACGCAGCCCCTGATCAGCAAAGAATGGTTTGGGACCTCATGCCTTTCTCTGTTTCTTATGCATAGCGTGAACGTGTTCGTCTTGAAGCGTGACCCATTTGTTCATTGATTGTTGCAGATGCTTGGTGAGAACTTGTATCCTCTTGTTGATCAGCTGGAGCATGAGCAGGCTGCGAAGGTGACTGGCATGCTGCTGGAGATGGACCAGACTGAGGTGCTGCACCTGCTCGAGTCTCCAGAGGCTCTCAAGGCCAAGGTTGCTGAAGCCATGGAGGTCCTTCGCACGGCCCAGCAGATCCAGACGAACGCGACGCCTGAACAGCAGCTTGCTTCTCTGTCGCTGAATGACGGCGTCGTTTCCTCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030226