BGIOSGA030238

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Revision as of 09:38, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030238| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030238, complete gene.| tag = P0501E0...")
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Gene Name

BGIOSGA030238

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030238, complete gene.

LocusTag

P0501E09.45

Ensembl Transcript ID

BGIOSGA030238-TA

Ensembl Protein ID

BGIOSGA030238-PA

Length

2385

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:623879..626263

Sequence Coding Region

623879..626263

Genome Context

<gbrowseImage1> name=IndicaChromosome09:623879..626263 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:623879..626263 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGATGTGCGGCGGCGGCACGGTCCTTCCTCCCTCTCCCCTCCACCACCCGCATCCACACCACCGCCACCGCATCGTCTCCATCTCTCGCCGCCGAGCTCGACGCCGCCGACGCCCTCCACGCGCTCCTCTCCACGCTCCCGCCCTCGCTCCCCGCGCTGCTCCCCTGCCTCTCCCTCCTCTCGCCAACCCTCACCCCGCACGCCGTCTCGGATGCCCTCCTCTGCGCCGCCATCCCCGCCGCCTCCCGCCTCCGCCTCTTCCTCTTCTCCGCCCTCTCGCCGCGCCTCCGCTCCCGCCCGCTCCACGCCCACGCCGTATCCCTCCTCCTCCGACTCTCTTCCCATGCCGACGAGGCCATGTTCGACGCCCTCGCCGACGCCCGCGCCGCCGGCCTCCCGGCCTCCTCTTCCGCTTTCGCGGCACTCGTCGCCGCGCACTCCTCCGCCGGCCGCCACGCCGATGCCGTCCAGGCGTTCTCCCGGATGGATGAGTTCCAAAGCCGCCCCACCGCCTTCGTCTACAACACCATCCTCAAGGCCCTCGTCGACAGCGGGGTCATCCTCCTCGCCCTGGCTCTCTACAACCGGATGGTCGCCGCCGGCTGCGCGCCCAACAGGGCCACGTACAATGTACTCATGGACGGGCTGTGCAAGCAGGGTATGGCGGGGGATGCGCTCAAGATGTTCGACGAAATGCTTGACAGGGGGATCATGCCCAATGTGAAGATCTACACCGTCCTGCTCTCGTCCCTGTGCAATGCAGGGAAGATTGACGAAGCCGTGCAGCTTCTGGGGTCGATGAAGGACAAGGGGTGCCTGCCCGACGAGGTCACTTACAACGCCTTCTTGAGTGGTCTGTGCAAAGTTGGTAGGGTCAATGAGGCATTTCAGCGCCTGGTGATGCTGCAAGATGGTGGATTTGCACTGGGGTTAAAAGGGTATAGCTGTTTGATTGATGGTCTGTTCCAGGCCAGGCGTTTTGATGAGGGCTTTGGCTATTACAAGACAATGTTAGAGCGCAACATCTCACCAGACGTTGTTCTGTATACGATAATGATCCGTGGTTGTGCAGAGGCCGGCAGAATTGAGGATGCCTTATCATTCCTTGATGTAATGAAAAAGAAAGGTTTCGTGCCTGACACCTTTTGTTATAACACAGTGCTCAAGGTTCTATGTGATCACGGTGATCTAGAGAGAGCTCACACGTTGAGGTCAGAGATGTTGCAGAATAACTTGGTCCTAGACTCCACTACACAAACTATCATGATATGTGGACTGTGCAAGCGAGGACTTGTTGATGAGGCAATGCAGATTTTTGATGAGATGGGAGAGCATGGTTGTGATCCAACAGTTATGACATACAACGCACTCATTGACGGATTCTACAGGGAGGGCAGACTGGAGGAAGCTCGTATGCTTTTCCATAAGATGGAGATGGGAAATAATCCTTCCTTGTTCCTTCGGTTGACCCTCGGTGCAAACCAGGTGCGTGACAGTGAGAGCCTCCGTAAACTGGTTCATGATATGTGCCAATCTGGCCAGGTGCTAAAAGCATACAAACTTCTTCGAAGTATAATAGACAGTGGAGTCGTTCCTGATGTTGTCACGTATAACACATTGATAAATGGACTCTGTAAAGCGAGGAATCTTGATGGAGCAGTAAGGCTCTTCAAAGAGCTTCAACTCAAAGGAATTTCTCCTGATGAAATTACTTACGGGACTCTTATTGATGGGCTGTTGAGGGCGCACAGAGAAAATGATGCCATGATGTTGTTTCAGAACATTTTGCAGAGCGGTAGCTCCCCGAGTTTGTCAATCTACAATTCTATGATGAGATCGCTATGTAGGATGAAGAAATTGTCGCAAGCAATCAACCTCTGGTTGGATTACCTGCCGAAAAAGTACAATTTCCCAGTGGAGAGTGAAGTACTTGCTAATGCCCACAAAGAAATTGAAGATGGTTCCCTGGATGATGGAGTAAGGGAGTTAATCAAGATAGATCAAGAATATGGTTCTATTAGTTCAAACCCTTATACCATTTGGCTAATTGGGCTTTGTCAGGTAAGGAGAACTGATGATGCACTTAGGATTTTTCATACTCTTCAGGAGTTTGGCATTGACATCACACCAGCATGCTGTGCCCTTCTTATCAATTACTTATGTTGGGATAGAAATCTAAATGCGGCAGTTGATATTATGCTGTATGCATTGAGTAAATCCATCATTTTGTCACAACCTGTAGGCAACCGCTTACTTAGGTGGCTTTGTATCTGTTACAGAAGGCAGGATGCACAAGCTCTTGCATGGAGAATGCATCTTGTAGGATATGATATGGATGTATATCTCCGTGAGCCTACAAAAAGTTTGTTATACAGTCAATAG</cdnaseq>

Protein Sequence

<aaseq>MRCAAAARSFLPLPSTTRIHTTATASSPSLAAELDAADALHALLSTLPPSLPALLPCLSLLSPTLTPHAVSDALLCAAIPAASRLRLFLFSALSPRLRSRPLHAHAVSLLLRLSSHADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSIILSQPVGNRLLRWLCICYRRQDAQALAWRMHLVGYDMDVYLREPTKSLLYSQ</aaseq>

Gene Sequence

<dnaseqindica>1..2385#ATGAGATGTGCGGCGGCGGCACGGTCCTTCCTCCCTCTCCCCTCCACCACCCGCATCCACACCACCGCCACCGCATCGTCTCCATCTCTCGCCGCCGAGCTCGACGCCGCCGACGCCCTCCACGCGCTCCTCTCCACGCTCCCGCCCTCGCTCCCCGCGCTGCTCCCCTGCCTCTCCCTCCTCTCGCCAACCCTCACCCCGCACGCCGTCTCGGATGCCCTCCTCTGCGCCGCCATCCCCGCCGCCTCCCGCCTCCGCCTCTTCCTCTTCTCCGCCCTCTCGCCGCGCCTCCGCTCCCGCCCGCTCCACGCCCACGCCGTATCCCTCCTCCTCCGACTCTCTTCCCATGCCGACGAGGCCATGTTCGACGCCCTCGCCGACGCCCGCGCCGCCGGCCTCCCGGCCTCCTCTTCCGCTTTCGCGGCACTCGTCGCCGCGCACTCCTCCGCCGGCCGCCACGCCGATGCCGTCCAGGCGTTCTCCCGGATGGATGAGTTCCAAAGCCGCCCCACCGCCTTCGTCTACAACACCATCCTCAAGGCCCTCGTCGACAGCGGGGTCATCCTCCTCGCCCTGGCTCTCTACAACCGGATGGTCGCCGCCGGCTGCGCGCCCAACAGGGCCACGTACAATGTACTCATGGACGGGCTGTGCAAGCAGGGTATGGCGGGGGATGCGCTCAAGATGTTCGACGAAATGCTTGACAGGGGGATCATGCCCAATGTGAAGATCTACACCGTCCTGCTCTCGTCCCTGTGCAATGCAGGGAAGATTGACGAAGCCGTGCAGCTTCTGGGGTCGATGAAGGACAAGGGGTGCCTGCCCGACGAGGTCACTTACAACGCCTTCTTGAGTGGTCTGTGCAAAGTTGGTAGGGTCAATGAGGCATTTCAGCGCCTGGTGATGCTGCAAGATGGTGGATTTGCACTGGGGTTAAAAGGGTATAGCTGTTTGATTGATGGTCTGTTCCAGGCCAGGCGTTTTGATGAGGGCTTTGGCTATTACAAGACAATGTTAGAGCGCAACATCTCACCAGACGTTGTTCTGTATACGATAATGATCCGTGGTTGTGCAGAGGCCGGCAGAATTGAGGATGCCTTATCATTCCTTGATGTAATGAAAAAGAAAGGTTTCGTGCCTGACACCTTTTGTTATAACACAGTGCTCAAGGTTCTATGTGATCACGGTGATCTAGAGAGAGCTCACACGTTGAGGTCAGAGATGTTGCAGAATAACTTGGTCCTAGACTCCACTACACAAACTATCATGATATGTGGACTGTGCAAGCGAGGACTTGTTGATGAGGCAATGCAGATTTTTGATGAGATGGGAGAGCATGGTTGTGATCCAACAGTTATGACATACAACGCACTCATTGACGGATTCTACAGGGAGGGCAGACTGGAGGAAGCTCGTATGCTTTTCCATAAGATGGAGATGGGAAATAATCCTTCCTTGTTCCTTCGGTTGACCCTCGGTGCAAACCAGGTGCGTGACAGTGAGAGCCTCCGTAAACTGGTTCATGATATGTGCCAATCTGGCCAGGTGCTAAAAGCATACAAACTTCTTCGAAGTATAATAGACAGTGGAGTCGTTCCTGATGTTGTCACGTATAACACATTGATAAATGGACTCTGTAAAGCGAGGAATCTTGATGGAGCAGTAAGGCTCTTCAAAGAGCTTCAACTCAAAGGAATTTCTCCTGATGAAATTACTTACGGGACTCTTATTGATGGGCTGTTGAGGGCGCACAGAGAAAATGATGCCATGATGTTGTTTCAGAACATTTTGCAGAGCGGTAGCTCCCCGAGTTTGTCAATCTACAATTCTATGATGAGATCGCTATGTAGGATGAAGAAATTGTCGCAAGCAATCAACCTCTGGTTGGATTACCTGCCGAAAAAGTACAATTTCCCAGTGGAGAGTGAAGTACTTGCTAATGCCCACAAAGAAATTGAAGATGGTTCCCTGGATGATGGAGTAAGGGAGTTAATCAAGATAGATCAAGAATATGGTTCTATTAGTTCAAACCCTTATACCATTTGGCTAATTGGGCTTTGTCAGGTAAGGAGAACTGATGATGCACTTAGGATTTTTCATACTCTTCAGGAGTTTGGCATTGACATCACACCAGCATGCTGTGCCCTTCTTATCAATTACTTATGTTGGGATAGAAATCTAAATGCGGCAGTTGATATTATGCTGTATGCATTGAGTAAATCCATCATTTTGTCACAACCTGTAGGCAACCGCTTACTTAGGTGGCTTTGTATCTGTTACAGAAGGCAGGATGCACAAGCTCTTGCATGGAGAATGCATCTTGTAGGATATGATATGGATGTATATCTCCGTGAGCCTACAAAAAGTTTGTTATACAGTCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030238