BGIOSGA030250

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Revision as of 09:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA030250| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA030250, complete gene.| tag = P0414D0...")
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Gene Name

BGIOSGA030250

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA030250, complete gene.

LocusTag

P0414D03.36

Ensembl Transcript ID

BGIOSGA030250-TA

Ensembl Protein ID

BGIOSGA030250-PA

Length

6526

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:153568..160093

Sequence Coding Region

159804..160093,159588..159709),complement(159417..159507,156610..156739),complement(156457..156527
,153568..154042

Genome Context

<gbrowseImage1> name=IndicaChromosome09:153568..160093 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:153568..160093 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAACCGCACGGACCCCCTGGCGAAGAGCATCCACGGGACGAACCCTCAGAACCTGGTGGAGAAGATCGTCCGGTCCAAGATCTACCAGAGCACCTACTGGAAGGAGCAGTGCTTCGGCCTCACCGCCGAGACCCTCGTCGACAAGGCCATGGAGCTCGACCACACCGGCGGCACCTACGGCGGCAACCGCAAGCCCACCCCCTTCCTCTGCCTCGCCCTAAAGATGCTCCAGATCCAGCCCGACAAGGACATCGTCGTCGAGTTCATCAAGAACGAGGATTACAAGTATGTCCGTGTTCTTGGTGCCTTCTACCTTCGCCTCACTGCCACCGTCGCCGACGTCTACCAATACCTCGAGCCGCTCTACAACGACTACCGCAAGATCAGGCACAAGCTCAGTGATGGAAAGTTTACCCTGACCCACGTCGACGAGTTCATTGACGACCTCCTCACCAAGGACTACTCCTGCGATACGGCCCTCCCCCGCATCCAGAAAAGATGGGTTCTTGAAACTTCTGGAACTCTAGAACCAAGAAGAAGTGCACTTGAAGATGATTTTGAGGAAGAGGAGGAAGACAAGGAGGATGAACAACCTATGGATATAGATGAGCCAAATGGTCGTGAAAAGCATGATCATTATCGTGGAAGGAGCCCTACTAGAGATCGAGACAGGGAGAGGAAACATGAAAGACACCACAGGGACCGAGATTACGACAGAGATCGGGATTATGGTAGGGGATGGGAAAGAGACCGAGATAGAGACCGTGAAAGAGATAGAGACAGGGATAGAGATCGGGATCGGGATCGGGATCGAGACCGTCATCGCATACGAGATGAGGACTACAGTCGAGATAGGGACCGAGCAAGAGATAGGGATGGCAGGGAAAGAGAACGCCGGGACAGAGACCGTGGGAGGCGCAGGAGCCGTTCAAGGAGCAGGAGCAGGGATCGACGAGAAAGAGACCGAGAAGATGGAGAGTACCGTAGGAGGCGTGATCGGGGTAGTGCCAGTCCTCGAGGTCATGCGGAGGATGGTGGCTCAAGAGATGAGCCGAAGAAGAGAAAGGAAAAGAAAGAGAAGAAGAGTGAAGGAAATGCACCAGATCCAAATGACCCAGAGATTATAGAAATGAACAAGCTCCGAGCCTCTCTAGGGTTGAAACCACTGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MANRTDPLAKSIHGTNPQNLVEKIVRSKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGTYGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTATVADVYQYLEPLYNDYRKIRHKLSDGKFTLTHVDEFIDDLLTKDYSCDTALPRIQKRWVLETSGTLEPRRSALEDDFEEEEEDKEDEQPMDIDEPNGREKHDHYRGRSPTRDRDRERKHERHHRDRDYDRDRDYGRGWERDRDRDRERDRDRDRDRDRDRDRDRHRIRDEDYSRDRDRARDRDGRERERRDRDRGRRRSRSRSRSRDRRERDREDGEYRRRRDRGSASPRGHAEDGGSRDEPKKRKEKKEKKSEGNAPDPNDPEIIEMNKLRASLGLKPLK</aaseq>

Gene Sequence

<dnaseqindica>1..290#385..506#587..677#3355..3484#3567..3637#6052..6526#ATGGCGAACCGCACGGACCCCCTGGCGAAGAGCATCCACGGGACGAACCCTCAGAACCTGGTGGAGAAGATCGTCCGGTCCAAGATCTACCAGAGCACCTACTGGAAGGAGCAGTGCTTCGGCCTCACCGCCGAGACCCTCGTCGACAAGGCCATGGAGCTCGACCACACCGGCGGCACCTACGGCGGCAACCGCAAGCCCACCCCCTTCCTCTGCCTCGCCCTAAAGATGCTCCAGATCCAGCCCGACAAGGACATCGTCGTCGAGTTCATCAAGAACGAGGATTACAAGTCACTACCCTACTCTTCTCTCTTCTTCTTCTTTTTTTTGTTCTTTTTGTTCTTTGCCTTCCTACTACTCTCTTCCTAATGAATGAATCTGCAGGTATGTCCGTGTTCTTGGTGCCTTCTACCTTCGCCTCACTGCCACCGTCGCCGACGTCTACCAATACCTCGAGCCGCTCTACAACGACTACCGCAAGATCAGGCACAAGCTCAGTGATGGAAGTATGCACCGCCAATTCTTTTCTTTTCATTTCTGCTTATTATTTATTTTCCTGCTAATTAGATACATGTTCTCCTTTCAGAGTTTACCCTGACCCACGTCGACGAGTTCATTGACGACCTCCTCACCAAGGACTACTCCTGCGATACGGCCCTCCCCCGCATCCAGAAAAGGTCTCTTTCTTTTTCCTTACTCCCCTCACTCACTCTTCTATTCTTTTACAGTTAAAAGAAATCCCTATTTACATTTATTGAAATGAAATCAGAAAATGATCGACCACTTACCTAAAAGAAATCCCTATTTACATTTATTGAAATGAAATCAGAAAATGGTCGACCACTTAACGCAATGTTTTTATTTTGGAGTCATGTTGGGTCACATAATACTACCTAGTTCATTTTCTAAACATGCTGGATCATAGTATCAGCCAGCACATCCTGCAATAACACTCTGGTAATTTATGGAACCAACCTTCACATAGGTGATTTCACATACATCATTTGCTATGATATTACATTCAAATCCATAGAATGCGAGACAGCCACACATGGAACATGTTAACACGAAGAACAAAAGCACTTGTGGAGCCATACAAACTTCTTTTTGGCGGGCTACATATATATCTTTTTTTGGACAAAAGCACTTCTGGAGCCATGTGAACTAGTCAGTGAGCTATCTTTTTTTTTTAAAAAAAAGAATTAGTAGGCTATTTTTACTGTTTCACATCGTTAACAAAAGAAATATTTGATCTTTGAAGGCATATATTAACATAACCTATGAACATAAGAGGGAAAAGAGATGCAGAGCTTTGAAAGAAGTGTTAGTTGAACATGAGCATTGTACAGTTACATTTGTTACAATTGTAGAGGAGTTTTACCCCAGAGAATTTGTAAATCTTTTGCATCCCCAACATTCGTATCTTCTACCACAGAGATCCCCTTACTAAAACAGTGTTATATGATCTGGGGAACAAGTGTTACCGCAGACAATTGATCTAGTTATCTTCACAGAAATTTGTAGTTTGTATTCTGCTCATCTCCATTTGCGTTGAAAAATGAACAGAAAACAACCTGAACTTCCATTCTATGTTGCCAAATTTGGGAGTCTCAATGTTTTTTGGATCTCACATATTGACAAAACTAGATTTCATCATACCCACTTTTTCATGGTTTACTCAAGTTTAGCCAACACTAATTATCCAGAAACTCAAAATTCTGATTCTGAACCAATACAGGTCTCAGTTGTTTTTTAGCAAAGCAAGTACCCTGTTTCAGGAGTCTTGAATGCAAGTGGAAAATTTGTGGTATGCAAAGGAAACATTTTCAGTTGCAACCAATAAAGTATCAACGAGAAAAGAAACCAATCCAATGGTGAAGTGCCATAGATAGCTGGCCTGGCATTTGTTTCATTTGCAGACCAAGCACCAACCATCCATTACGTGCGCATTTCCTTGATCAAACATTTAACATCATCCTTCTTGATTGCTGACTTAATCACGCATTGCAATAATTATGGATGGGTCATAACTAAGGCGTAGTTCATGATCCAGTGGTGAGCGGAATGCTGCACGGTTATCTGTATAAACCAAATAGCATGCTAGTAAAAACTCAGTTTTTGCTTGTACAATCCAAACATAAATTCTATAAAATCACCCTAACAGAATAATTACTAAAGACTAGTTTTCCCAAATGTTTTGAATAAAACCTATTTTGTTAAAAATAAAACTAATCTCTAATCAATGGGATCCAAACGGTCACTTATAGGTCTGATAATCTTTTGGAAAGGCAGACTGGCTAACCAGCGAACCCACTTATAGGTCAAAATAAGTGGTTTAGCCGCTTATTTGACCTATAAGTGGGTTCGCAGGTTAGCCACTTACACCCTTAGCAGAGGATAAGTTTTTTTCTATCATTTTCTATAACAATTCCCACAACATCGAAAATGCCATCACCATCATATTATAACACTGCAATCCCTCTCCCCACTAAATGGGATATTACACTATGAATAAGACTGAAATACTGGCCTCTCATACAGTTGTGGCAGCAAATCAGGTGCCAAATTAAATAACAGAAGAAAAAGGCAATAATTTTGACCAATTTGAGCATTCATTTTAGTCACAATAATATTTCGTGTTTCAGAACTTTGTATAGAAAGAACATGTTATTTTATCAATTGTTTTTTTAGTCTTGAAATCCAATTTAAACGAACACAAGATACTCTATACTCCCGTCGTTCCCTTTAACATCTCGTTTAGGATATTGACATGGTAATGCACTACGATTGATCACTACCTTTTCTAATCACATGTTCAAAAAAAATTAAAAACATTAAAAACACTATGATTGACGGAAGTATCTTTCATTAAAGATCTGATTTGTCATTTTTGCATCAGGTCTTATTATTTTTTCATATGCTAGTGAGTTGTAAGATTTTGAGGTTTGACCGCGAGCATTCTAAGACGTCATCTATTTGAGAGTATATTAGTAACTACATTGTGTATTCTGAACTTGTCTTGTTTTCCAGAATTTGCATGTGCGACTTGTTAACTAATGTTCTGTTTCTTTCTCCATACATGTGAGATTAGGTTTCACTTGGAGAGATCATATTTATTTTACGTGGATCACACTTGTTGACGGGCTGTAGTTCACAAGGTGTTTATTAATTTTGAGATGGCAACAGTAGCCTAATCACCATATTCTTAATTAAATGATTAGGTCATGATGTGTTTATCTGTTTTTGAATAATCTGGTTTGATTAGAAAATATCTTTGCTTTGATGTGTCAGCAGTGATGGTTCGAGAATTCCATAAACTAAAAAAAAAATCATTTTCATGAATCCTTTGTACAGATGGGTTCTTGAAACTTCTGGAACTCTAGAACCAAGAAGAAGTGCACTTGAAGATGATTTTGAGGAAGAGGAGGAAGACAAGGAGGATGAACAACCTATGGATATAGATGAGCCAAATGGTCGTGAAAAGGTAAACATATGTTAAACAAATATACATTGGAACCACATACTTTATTGACCATATGTGTTGACTTCTCTTTTACTATCTTTAGCATGATCATTATCGTGGAAGGAGCCCTACTAGAGATCGAGACAGGGAGAGGAAACATGAAAGACACCACAGGTATGCTAATTTATGTGAATTGCCTATAGGCGTGGTAGTTACTGAGTTATCATTAGTTTTTCTTGAAGTTCTTGATCTGTGTAGCATAGATATTTCCTTTTATGGAAATGAGAATCAGGAGGTGAGAGCTAACTGGGACATGTTCATTTGATAGCAAGCTGTTAATACTTGCCAGAAACCATTCTATTGATCATCTGACTATCTGAGTGCTTCTTAACGTTCAAACCAAGAGTGTTTTAAATACCTTTCAACTGGTTGAGGATCGAACAGTCCACCTTGTTTTACTGATGTTGATTATGCTACTGCTTCCGTGCACAAGTCATATTAGCTTGGGCAATATCAAGTGAAACTTTAAGGCACAGTCATTTCTCTATCTTTGTTTTGGTAACCAGAGAATAGGAATCCACCTTCCGTTGTTGTTACTCATTACAATAGATGAAGGCGTGGTACAGCTCTTAAAAAGCTGAAACTATTGTGAAGTTTGATCTTTTAAGAATAGTTTTAGGTAGATTTTTTCTTGTCTTAGCAATCATGAAAAAAGAGTTGGGCCATGGAAGTGGGGAATAAGTTCCCTGAGGCTATGATTGGTCCTAAAATCAAATTCTAAAATTTAAAATCAGCTTCAACTTTTAATAAAAAGCTCTGGGTCAATTTCTGCAGAAATCTTTTTAATTTTTATCATGTGCTAAGGTTTGTGATGTAAAAACCACTGGGAGGTAGCTGTGCAGTGTTGGCTGCTAGGGGATAAAGGGAGGACTGGGATGAAGAGTACTGGAGAGTGATTAGATTAAATATTCCTCCTTGCTTCATTCCAAAGGACTAGCTCAATAGCCATTATACAGGTGGCATTGATAACCTACTAATCTAATCAAATCCCTATCTAAGGAAACCTCCTCCAATGCATCGTAATCACGTGCCTCATGCTCCTCACGTGCACTGAGGTTGAGATTGCCTCCCTTTGGCTAGATGATTGCCCTGGTCATGGGAGGCTCATGCCCATGACAGTTTTACTGATGTTTCTTGATTTATTGACGCAAAATATTTCTGGTGAGCTCAGGCATTTGTTATTGCTTTTCAAACACATAGTAGTAAAATTCATTTACCTTCTGTCTTTACGGCTGATGAAGAAGACTAGTTTTGAAGATGTGAGTGATGCCATGATATTCCAAAGCTTACTAAAAACTGTATATGGTCTCTTTTTGCTAAATATGGTCACGTTACTATTGTTTCTTTCTATTTTTGCCAATAAATGATGAGCTACAAAAGATTTGTTTTTTTCGTGTCACGTCTGATTAATTCTTTCTTTTTTTTTAATGCCCAATATCTTGACTGAAGCATGGAGGTCAAAATAAATAGAATAATAATGAATGGAAAAAAGAGAAAATCCTTAGCTCGTTTAGCTTTGTCGAAATGGAAACTTGGTTCATGCTTGATTGAATATTTTTTTCGAAAGTTCAACTAAATAAAGGCATTCCGTTTCAACTACTAATGTAAGTTGCATATTGTTAAATTTTAAAATCAAGTTCATCCGTTCCAAATGAATCGACTGGCTGCTCCATATTTTAACCTGTGTTGAATGTACATTACCCTTCATTTGTTCAGTAAAGAAGCTTGTTTTTATAATTCTGATTTAATAATATAGGAAAAAAGAGCAGTGGAAAAGTTTTCGTGGGCATAATTTGAAAAGAGATTCCCTGTAGTAGTGTAGTCTAGCTATTGCTGATTGAAGCGGTGTCTACCTGAGCTGCATTTGGTTTTCTTAATTGCATACTGGAAGCTGTTCCTGTGACATAACACTGTTGCATGGACTAATTACTGCCATGGCATGTTATTGTCAAGAGCCATTGGTAGGTCAGCCGCTTCCTAGAGTGAATGTGATCATGACCCTGCCAGGTTTCTCTGCACTGACAGTGTGCAGTGAGAAGTATGATGGGTTGGACAGATTAACAACTTATAAACTATAAGGTGGGTTGGACAGCTTAAAAATTATAAAGTATAAAATGTTTCAAATCAAAACGTTTTGCCTTTTTGTAGCTGTTTTGTTTTAGTTCATGTTTCAGTTTGTATCAGGTTCCTGCTGCTTTGGCTGTACTTTCAGCTTTTGACAGCATGAACTGTGCGAATTATATTGTTAGGGAGAATAGAATGTGAACAACCTCGAAATTTTTTAATGTTGGATTCTTGAGCAAGTACAGCTCAACATATGCTGTAAGAACATTTCTATGTGCATACTAAAGTTTGGTGCCATCTTAATATGGCACCACTTGTTTTGATGCTAAATATATTGCGGAATACCTTCATTTGTTTATCATAAATTGGGACCTGCTGTTCTATTTGTAATACTTGCAATAGCTATTGATATCTGTTGATTTGACCGCATTTTGAAATGCTTCTGTTTTTTATGTGTATTCCAGGGACCGAGATTACGACAGAGATCGGGATTATGGTAGGGGATGGGAAAGAGACCGAGATAGAGACCGTGAAAGAGATAGAGACAGGGATAGAGATCGGGATCGGGATCGGGATCGAGACCGTCATCGCATACGAGATGAGGACTACAGTCGAGATAGGGACCGAGCAAGAGATAGGGATGGCAGGGAAAGAGAACGCCGGGACAGAGACCGTGGGAGGCGCAGGAGCCGTTCAAGGAGCAGGAGCAGGGATCGACGAGAAAGAGACCGAGAAGATGGAGAGTACCGTAGGAGGCGTGATCGGGGTAGTGCCAGTCCTCGAGGTCATGCGGAGGATGGTGGCTCAAGAGATGAGCCGAAGAAGAGAAAGGAAAAGAAAGAGAAGAAGAGTGAAGGAAATGCACCAGATCCAAATGACCCAGAGATTATAGAAATGAACAAGCTCCGAGCCTCTCTAGGGTTGAAACCACTGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA030250